SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    196401 3vsz:A (2.893) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196402 3vsz:B (2.893) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196403 3vsz:B (2.893) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196404 3vsz:C (2.893) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196405 3vsz:C (2.893) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196406 3vsz:E (2.893) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196407 3vsz:E (2.893) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196408 3vsz:F (2.893) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196409 3vsz:F (2.893) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196410 3vsz:F (2.893) BS03 GAL ? GO:0004553 ... A3DD67 22960181
    196411 3vsz:F (2.893) BS04 GAL ? GO:0004553 ... A3DD67 22960181
    196412 3vt0:A (2.913) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196413 3vt0:B (2.913) BS01 BGC ? GO:0004553 ... A3DD67 22960181
    196414 3vt0:B (2.913) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196415 3vt0:C (2.913) BS01 BGC ? GO:0004553 ... A3DD67 22960181
    196416 3vt0:C (2.913) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196417 3vt0:E (2.913) BS01 BGC ? GO:0004553 ... A3DD67 22960181
    196418 3vt0:E (2.913) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196419 3vt0:F (2.913) BS01 BGC ? GO:0004553 ... A3DD67 22960181
    196420 3vt0:F (2.913) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196421 3vt0:F (2.913) BS03 BGC ? GO:0004553 ... A3DD67 22960181
    196422 3vt0:F (2.913) BS04 GAL ? GO:0004553 ... A3DD67 22960181
    196423 3vt1:A (3.187) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196424 3vt1:B (3.187) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196425 3vt1:C (3.187) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196426 3vt1:C (3.187) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196427 3vt1:E (3.187) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196428 3vt1:F (3.187) BS01 GAL ? GO:0004553 ... A3DD67 22960181
    196429 3vt1:F (3.187) BS02 GAL ? GO:0004553 ... A3DD67 22960181
    196430 3vt2:A (3.002) BS01 IPT ? GO:0004553 ... A3DD67 22960181
    196431 3vt2:B (3.002) BS01 IPT ? GO:0004553 ... A3DD67 22960181
    196432 3vt2:C (3.002) BS01 IPT ? GO:0004553 ... A3DD67 22960181
    196433 3vt2:D (3.002) BS01 IPT ? GO:0004553 ... A3DD67 22960181
    196434 3vt2:E (3.002) BS01 IPT ? GO:0004553 ... A3DD67 22960181
    196435 3vt2:F (3.002) BS01 IPT ? GO:0004553 ... A3DD67 22960181
    196436 3vt2:F (3.002) BS02 IPT ? GO:0004553 ... A3DD67 22960181
    196437 3vt3:A (1.7) BS01 peptide ? GO:0003677 ... P13053 23944708
    196438 3vt3:A (1.7) BS02 VDX ? GO:0003677 ... P13053 23944708 BindingDB: Ki=0.1nM, EC50=0.2nM
    196439 3vt4:A (1.9) BS01 peptide ? GO:0003677 ... P13053 23944708
    196440 3vt4:A (1.9) BS02 5YI ? GO:0003677 ... P13053 23944708
    196441 3vt5:A (2.11) BS01 peptide ? GO:0003677 ... P13053 23944708
    196442 3vt5:A (2.11) BS02 YI2 ? GO:0003677 ... P13053 23944708
    196443 3vt6:A (2.3) BS01 peptide ? GO:0003677 ... P13053 23944708
    196444 3vt6:A (2.3) BS02 5YI ? GO:0003677 ... P13053 23944708
    196445 3vt7:A (1.65) BS01 peptide ? GO:0003677 ... P13053 23944708
    196446 3vt7:A (1.65) BS02 VDX ? GO:0003677 ... P13053 23944708 BindingDB: Ki=0.1nM, EC50=0.2nM
    196447 3vt8:A (2.1) BS01 peptide ? GO:0003677 ... P13053 23944708
    196448 3vt8:A (2.1) BS02 YI3 ? GO:0003677 ... P13053 23944708
    196449 3vt9:A (2.35) BS01 peptide ? GO:0003677 ... P13053 23944708
    196450 3vt9:A (2.35) BS02 YI4 ? GO:0003677 ... P13053 23944708
    196451 3vta:A (2.75) BS01 DFP 3.4.21.25 GO:0004252 ... Q39547 22841692
    196452 3vta:B (2.75) BS01 DFP 3.4.21.25 GO:0004252 ... Q39547 22841692
    196453 3vtb:A (2.0) BS01 peptide ? GO:0003677 ... P13053 24773565
    196454 3vtb:A (2.0) BS02 TKA ? GO:0003677 ... P13053 24773565 MOAD: ic50=0.5nM
    196455 3vtc:A (1.5) BS01 peptide ? GO:0003677 ... P13053 24773565
    196456 3vtc:A (1.5) BS02 TK3 ? GO:0003677 ... P13053 24773565 MOAD: ic50=13nM
    196457 3vtd:A (2.7) BS01 peptide ? GO:0003677 ... P13053 24773565
    196458 3vtd:A (2.7) BS02 TKD ? GO:0003677 ... P13053 24773565
    196459 3vte:A (2.75) BS01 FAD 1.21.3.7 GO:0016491 ... Q8GTB6 22766313
    196460 3vtf:A (2.0) BS01 UPG 1.1.1.22 GO:0000271 ... A1RUM9 22949183
    196461 3vtg:A (1.34) BS01 ZN 3.4.24.67 GO:0004222 ... P31580 N/A
    196462 3vth:A (2.0) BS01 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196463 3vth:A (2.0) BS02 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196464 3vth:A (2.0) BS03 APC 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196465 3vth:A (2.0) BS04 AP2 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196466 3vth:A (2.0) BS05 FE 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196467 3vth:A (2.0) BS06 PO4 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196468 3vth:B (2.0) BS01 PO4 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196469 3vth:B (2.0) BS02 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196470 3vth:B (2.0) BS03 APC 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196471 3vth:B (2.0) BS04 AP2 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196472 3vth:B (2.0) BS05 FE 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196473 3vti:A (2.56) BS01 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196474 3vti:A (2.56) BS02 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196475 3vti:A (2.56) BS03 FE 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196476 3vti:B (2.56) BS01 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196477 3vti:B (2.56) BS02 ZN 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196478 3vti:B (2.56) BS03 FE 3.6.1.7
    6.2.-.-
    GO:0003725 ... Q8RDB0 22740694
    196479 3vti:C (2.56) BS01 MG ? N/A Q8RDA7 22740694
    196480 3vti:D (2.56) BS01 MG ? N/A Q8RDA7 22740694
    196481 3vtj:A (2.56) BS01 HEM 1.11.2.4 GO:0004497 ... O24782 N/A
    196482 3vtk:A (3.0) BS01 ADP 2.7.1.21 GO:0000166 ... P0DTH5 9336833
    196483 3vtk:A (3.0) BS02 5IU 2.7.1.21 GO:0000166 ... P0DTH5 9336833
    196484 3vtm:A (2.8) BS01 3ZZ ? N/A Q931P4 23649633
    196485 3vtm:B (2.8) BS01 3ZZ ? N/A Q931P4 23649633
    196486 3vto:A (1.44) BS01 FE ? N/A Q9T1V4 22922659
    196487 3vto:A (1.44) BS02 CA ? N/A Q9T1V4 22922659
    196488 3vto:B (1.44) BS01 FE ? N/A Q9T1V4 22922659
    196489 3vto:B (1.44) BS02 CA ? N/A Q9T1V4 22922659
    196490 3vto:C (1.44) BS01 FE ? N/A Q9T1V4 22922659
    196491 3vto:C (1.44) BS02 CA ? N/A Q9T1V4 22922659
    196492 3vto:P (1.44) BS01 FE ? N/A Q9T1V4 22922659
    196493 3vto:P (1.44) BS02 CA ? N/A Q9T1V4 22922659
    196494 3vto:Q (1.44) BS01 FE ? N/A Q9T1V4 22922659
    196495 3vto:Q (1.44) BS02 CA ? N/A Q9T1V4 22922659
    196496 3vto:R (1.44) BS01 FE ? N/A Q9T1V4 22922659
    196497 3vto:R (1.44) BS02 CA ? N/A Q9T1V4 22922659
    196498 3vtp:C (1.9) BS01 peptide ? N/A P03377 22879603
    196499 3vtr:A (2.5) BS01 TMX 3.2.1.52 GO:0004553 ... Q06GJ0 23300622
    196500 3vu1:A (2.7) BS01 CA 2.4.99.21 GO:0004576 ... O74088 23177926
    196501 3vu1:B (2.7) BS01 CA 2.4.99.21 GO:0004576 ... O74088 23177926
    196502 3vu2:A (2.23) BS01 GLC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196503 3vu2:A (2.23) BS02 GLC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196504 3vu2:A (2.23) BS03 GLC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196505 3vu2:A (2.23) BS04 BGC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196506 3vu2:A (2.23) BS05 BGC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196507 3vu2:B (2.23) BS01 GLC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196508 3vu2:B (2.23) BS02 GLC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196509 3vu2:B (2.23) BS03 GLC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196510 3vu2:B (2.23) BS04 BGC 2.4.1.18 GO:0003824 ... Q01401 22771800
    196511 3vu3:A (2.85) BS01 HEM 1.11.1.6 GO:0004096 ... P21179 24223139
    196512 3vu5:A (2.087) BS01 peptide ? N/A P03375 23233535
    196513 3vu6:A (2.324) BS01 peptide ? N/A P03375 23233535
    196514 3vu7:C (2.8) BS01 peptide ? GO:0000122 ... Q9UI95 22859296
    196515 3vu8:A (2.2) BS01 ZN 6.1.1.10 GO:0000166 ... P23395 N/A
    196516 3vu8:A (2.2) BS02 MDS 6.1.1.10 GO:0000166 ... P23395 N/A
    196517 3vuc:A (2.6) BS01 HHE 3.4.23.15 GO:0004190 ... P00797 24900544
    196518 3vuc:B (2.6) BS01 HHE 3.4.23.15 GO:0004190 ... P00797 24900544
    196519 3vud:A (3.5) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196520 3vud:A (3.5) BS02 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196521 3vuf:A (3.0) BS01 ADP 2.4.1.242 GO:0004373 ... Q0DEV5 22878205
    196522 3vug:A (3.24) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196523 3vug:A (3.24) BS02 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196524 3vug:A (3.24) BS03 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196525 3vug:A (3.24) BS04 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196526 3vuh:A (2.7) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196527 3vuh:A (2.7) BS02 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196528 3vuh:A (2.7) BS03 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196529 3vuh:A (2.7) BS04 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196530 3vuh:A (2.7) BS05 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196531 3vui:A (2.8) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196532 3vui:A (2.8) BS02 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196533 3vui:A (2.8) BS03 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196534 3vui:A (2.8) BS04 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196535 3vui:A (2.8) BS05 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196536 3vuk:A (2.95) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196537 3vuk:A (2.95) BS02 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196538 3vuk:A (2.95) BS03 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196539 3vul:A (2.81) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196540 3vum:A (2.69) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 23020677
    196541 3vum:A (2.69) BS02 SO4 2.7.11.24 GO:0004672 ... P45983 23020677
    196542 3vur:A (1.365) BS01 GTS 2.5.1.18 GO:0004364 ... Q5CCJ4 N/A
    196543 3vus:A (1.65) BS01 ZN 3.5.1.- GO:0005975 ... P75906 23275162
    196544 3vus:B (1.65) BS01 ZN 3.5.1.- GO:0005975 ... P75906 23275162
    196545 3vuv:A (2.114) BS01 ZN ? GO:0016020 ... Q8IJ45 22843685
    196546 3vuv:A (2.114) BS02 ZN ? GO:0016020 ... Q8IJ45 22843685
    196547 3vuv:A (2.114) BS03 ZN ? GO:0016020 ... Q8IJ45 22843685
    196548 3vuw:E (1.95) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196549 3vuw:F (1.95) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196550 3vuw:G (1.95) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196551 3vux:E (1.699) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196552 3vux:F (1.699) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196553 3vux:G (1.699) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196554 3vuy:D (1.981) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196555 3vuy:E (1.981) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196556 3vuy:F (1.981) BS01 ZN 2.3.2.-
    3.4.19.12
    GO:0003677 ... P21580 23032187
    196557 3vuz:A (2.5) BS01 K15 2.1.1.364 GO:0005694 ... Q8WTS6 23519668
    196558 3vv0:A (2.001) BS01 KH3 2.1.1.364 GO:0005694 ... Q8WTS6 23519668
    196559 3vv1:A (1.5) BS01 FUC ? GO:0005737 ... Q9N384 23481096
    196560 3vv1:A (1.5) BS02 GAL ? GO:0005737 ... Q9N384 23481096
    196561 3vv1:B (1.5) BS01 FUC ? GO:0005737 ... Q9N384 23481096
    196562 3vv1:B (1.5) BS02 GAL ? GO:0005737 ... Q9N384 23481096
    196563 3vv2:A (1.83) BS01 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196564 3vv2:A (1.83) BS02 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196565 3vv2:A (1.83) BS03 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196566 3vv2:A (1.83) BS04 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196567 3vv2:A (1.83) BS05 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196568 3vv2:A (1.83) BS06 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196569 3vv2:A (1.83) BS07 CA 3.4.21.- GO:0004252 ... P58502 23237738
    196570 3vv2:B (1.83) BS01 ZN 3.4.21.- N/A P58502 23237738
    196571 3vv3:A (1.76) BS01 CA N/A GO:0004252 ... N/A 24112706
    196572 3vv3:A (1.76) BS02 CA N/A GO:0004252 ... N/A 24112706
    196573 3vv3:A (1.76) BS03 CA N/A GO:0004252 ... N/A 24112706
    196574 3vv3:A (1.76) BS04 CA N/A GO:0004252 ... N/A 24112706
    196575 3vv3:B (1.76) BS01 CA N/A GO:0004252 ... N/A 24112706
    196576 3vv3:B (1.76) BS02 CA N/A GO:0004252 ... N/A 24112706
    196577 3vv3:B (1.76) BS03 CA N/A GO:0004252 ... N/A 24112706
    196578 3vv3:B (1.76) BS04 CA N/A GO:0004252 ... N/A 24112706
    196579 3vv4:A (2.0) BS01 PVG ? N/A Q8DLC7 23256156
    196580 3vv4:B (2.0) BS01 PVG ? N/A Q8DLC7 23256156
    196581 3vv5:A (1.9) BS01 SLZ ? GO:0015276 ... Q72JG5 23794618
    196582 3vv5:B (1.9) BS01 SLZ ? GO:0015276 ... Q72JG5 23794618
    196583 3vv6:A (2.05) BS01 B00 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=157uM
    196584 3vv7:A (2.1) BS01 0B1 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=4.6uM
    196585 3vv8:A (2.5) BS01 B02 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=17.1uM
    196586 3vv9:A (2.85) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196587 3vv9:A (2.85) BS02 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196588 3vv9:B (2.85) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196589 3vv9:B (2.85) BS02 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196590 3vv9:C (2.85) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196591 3vv9:C (2.85) BS02 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196592 3vv9:D (2.85) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196593 3vv9:D (2.85) BS02 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196594 3vva:A (2.59) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196595 3vva:A (2.59) BS02 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196596 3vva:A (2.59) BS03 CHW 1.-.-.- GO:0005739 ... Q26710 23487766
    196597 3vva:B (2.59) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196598 3vva:B (2.59) BS02 FE 1.-.-.- GO:0005739 ... Q26710 23487766
    196599 3vva:B (2.59) BS03 CHW 1.-.-.- GO:0005739 ... Q26710 23487766
    196600 3vva:C (2.59) BS01 FE 1.-.-.- GO:0005739 ... Q26710 23487766

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).