SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    198601 3wgt:B (1.88) BS02 QSC 1.4.3.3 GO:0003884 ... P00371 24644036
    198602 3wgu:A (2.8) BS01 ALF 7.2.2.13 GO:0000166 ... P05024 N/A
    198603 3wgu:A (2.8) BS02 MG 7.2.2.13 GO:0000166 ... P05024 N/A
    198604 3wgu:A (2.8) BS03 ADP 7.2.2.13 GO:0000166 ... P05024 N/A
    198605 3wgu:A (2.8) BS04 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198606 3wgu:A (2.8) BS05 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198607 3wgu:A (2.8) BS06 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198608 3wgu:C (2.8) BS01 ALF 7.2.2.13 GO:0000166 ... P05024 N/A
    198609 3wgu:C (2.8) BS02 MG 7.2.2.13 GO:0000166 ... P05024 N/A
    198610 3wgu:C (2.8) BS03 ADP 7.2.2.13 GO:0000166 ... P05024 N/A
    198611 3wgu:C (2.8) BS04 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198612 3wgu:C (2.8) BS05 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198613 3wgu:E (2.8) BS01 CLR ? GO:0001671 ... Q58K79 N/A
    198614 3wgu:G (2.8) BS01 CLR ? GO:0001671 ... Q58K79 N/A
    198615 3wgv:A (2.8) BS01 ALF 7.2.2.13 GO:0000166 ... P05024 N/A
    198616 3wgv:A (2.8) BS02 MG 7.2.2.13 GO:0000166 ... P05024 N/A
    198617 3wgv:A (2.8) BS03 ADP 7.2.2.13 GO:0000166 ... P05024 N/A
    198618 3wgv:A (2.8) BS04 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198619 3wgv:A (2.8) BS05 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198620 3wgv:A (2.8) BS06 EFO 7.2.2.13 GO:0000166 ... P05024 N/A
    198621 3wgv:A (2.8) BS07 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198622 3wgv:B (2.8) BS01 CLR ? GO:0001671 ... P05027 N/A
    198623 3wgv:C (2.8) BS01 ALF 7.2.2.13 GO:0000166 ... P05024 N/A
    198624 3wgv:C (2.8) BS02 MG 7.2.2.13 GO:0000166 ... P05024 N/A
    198625 3wgv:C (2.8) BS03 ADP 7.2.2.13 GO:0000166 ... P05024 N/A
    198626 3wgv:C (2.8) BS04 EFO 7.2.2.13 GO:0000166 ... P05024 N/A
    198627 3wgv:C (2.8) BS05 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198628 3wgv:C (2.8) BS06 CLR 7.2.2.13 GO:0000166 ... P05024 N/A
    198629 3wgv:D (2.8) BS01 CLR ? GO:0001671 ... P05027 N/A
    198630 3wgv:E (2.8) BS01 CLR ? GO:0001671 ... Q58K79 N/A
    198631 3wgv:G (2.8) BS01 CLR ? GO:0001671 ... Q58K79 N/A
    198632 3wgw:A (2.8) BS01 T2B ? GO:0000307 ... P12004 24474685 BindingDB: IC50=1300nM
    198633 3wgw:A (2.8) BS02 T2B ? GO:0000307 ... P12004 24474685 BindingDB: IC50=1300nM
    198634 3wgw:B (2.8) BS01 T2B ? GO:0000307 ... P12004 24474685 BindingDB: IC50=1300nM
    198635 3wgx:A (0.92) BS01 peptide 1.8.4.-
    5.3.4.1
    GO:0003756 ... Q8NBS9 24462249
    198636 3wgx:B (0.92) BS01 peptide 1.8.4.-
    5.3.4.1
    GO:0003756 ... Q8NBS9 24462249
    198637 3wgy:B (2.0) BS01 COI 1.4.1.16 GO:0009089 ... Q890V3 N/A
    198638 3wgz:B (2.25) BS01 DLE 1.4.1.16 GO:0009089 ... Q890V3 N/A
    198639 3wh0:A (1.6) BS01 O4B 5.2.1.8 GO:0000413 ... Q13526 25287606
    198640 3wh0:A (1.6) BS02 O4B 5.2.1.8 GO:0000413 ... Q13526 25287606
    198641 3wh2:A (1.3) BS01 CA ? N/A Q9ULY5 24101491
    198642 3wh2:A (1.3) BS02 CA ? N/A Q9ULY5 24101491
    198643 3wh3:A (1.32) BS01 CA ? N/A Q9ULY5 24101491
    198644 3wh3:A (1.32) BS02 CA ? N/A Q9ULY5 24101491
    198645 3wh6:A (1.6) BS01 BGC N/A GO:0004553 ... N/A 27092463
    198646 3wh6:A (1.6) BS02 BGC N/A GO:0004553 ... N/A 27092463
    198647 3wh6:A (1.6) BS03 BGC N/A GO:0004553 ... N/A 27092463
    198648 3wh6:A (1.6) BS04 GLC N/A GO:0004553 ... N/A 27092463
    198649 3wh7:A (1.1) BS01 FCB N/A GO:0004553 ... N/A 27092463
    198650 3wh8:A (1.9) BS01 IFM N/A GO:0004553 ... N/A 27092463
    198651 3wha:A (1.3) BS01 WHA 3.6.4.10 GO:0005524 ... P07900 24369839 MOAD: Kd=0.48nM
    BindingDB: Kd=0.480000nM
    198652 3wha:B (1.3) BS01 WHA 3.6.4.10 GO:0005524 ... P07900 24369839 MOAD: Kd=0.48nM
    BindingDB: Kd=0.480000nM
    198653 3whb:A (2.15) BS01 DCC ? GO:0000976 ... P94548 24356978
    198654 3whb:B (2.15) BS01 DCC ? GO:0000976 ... P94548 24356978
    198655 3whc:A (2.2) BS01 ST9 ? GO:0000976 ... P94548 24356978
    198656 3whc:A (2.2) BS02 ST9 ? GO:0000976 ... P94548 24356978
    198657 3whc:B (2.2) BS01 ST9 ? GO:0000976 ... P94548 24356978
    198658 3whc:B (2.2) BS02 ST9 ? GO:0000976 ... P94548 24356978
    198659 3whc:C (2.2) BS01 ST9 ? GO:0000976 ... P94548 24356978
    198660 3whc:C (2.2) BS02 ST9 ? GO:0000976 ... P94548 24356978
    198661 3whc:D (2.2) BS01 ST9 ? GO:0000976 ... P94548 24356978
    198662 3whc:D (2.2) BS02 ST9 ? GO:0000976 ... P94548 24356978
    198663 3whc:E (2.2) BS01 ST9 ? GO:0000976 ... P94548 24356978
    198664 3whc:E (2.2) BS02 ST9 ? GO:0000976 ... P94548 24356978
    198665 3whc:F (2.2) BS01 ST9 ? GO:0000976 ... P94548 24356978
    198666 3whc:F (2.2) BS02 ST9 ? GO:0000976 ... P94548 24356978
    198667 3whd:A (2.29) BS01 CA ? N/A Q8WXI8 24101491
    198668 3whd:C (2.29) BS01 CA ? N/A Q8WXI8 24101491
    198669 3whi:A (2.4) BS01 CA 3.4.21.62 GO:0004252 ... P04189 24279884
    198670 3whi:B (2.4) BS01 CA 3.4.21.62 GO:0004252 ... P04189 24279884
    198671 3whk:A (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198672 3whk:B (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198673 3whk:C (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198674 3whk:D (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198675 3whk:E (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198676 3whk:F (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198677 3whk:G (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198678 3whk:H (2.6) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198679 3whl:A (4.0) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198680 3whl:C (4.0) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198681 3whl:E (4.0) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198682 3whl:G (4.0) BS01 ATP ? GO:0005524 ... P33297
    Q8U4H3
    24685148
    198683 3whm:A (1.85) BS01 HEM ? GO:0004601 ... P69905 25287606
    198684 3whm:A (1.85) BS02 O4B ? GO:0004601 ... P69905 25287606
    198685 3whm:A (1.85) BS03 OXY ? GO:0004601 ... P69905 25287606
    198686 3whm:B (1.85) BS01 HEM ? GO:0004601 ... P68871 25287606
    198687 3whm:B (1.85) BS02 O4B ? GO:0004601 ... P68871 25287606
    198688 3whm:B (1.85) BS03 OXY ? GO:0004601 ... P68871 25287606
    198689 3whm:E (1.85) BS01 HEM ? GO:0004601 ... P69905 25287606
    198690 3whm:E (1.85) BS02 O4B ? GO:0004601 ... P69905 25287606
    198691 3whm:E (1.85) BS03 O4B ? GO:0004601 ... P69905 25287606
    198692 3whm:F (1.85) BS01 HEM ? GO:0004601 ... P68871 25287606
    198693 3whm:F (1.85) BS02 O4B ? GO:0004601 ... P68871 25287606
    198694 3whn:A (1.9) BS01 CFO ? GO:0046872 ... Q726F3 24400317
    198695 3whn:B (1.9) BS01 CFO ? GO:0046872 ... Q726F3 24400317
    198696 3whn:B (1.9) BS02 CA ? GO:0046872 ... Q726F3 24400317
    198697 3whp:A (2.52) BS01 B12 ? GO:0003677 ... Q746J7 N/A
    198698 3whs:B (1.8) BS01 AVN 2.3.2.2
    3.4.19.13
    N/A P54422 24531494
    198699 3wht:B (1.8) BS01 CA ? GO:0005509 ... Q8NI22 24498414
    198700 3wht:B (1.8) BS02 CA ? GO:0005509 ... Q8NI22 24498414
    198701 3whu:A (2.6) BS01 MAN ? GO:0016020 ... P49257 24498414
    198702 3whu:A (2.6) BS02 CA ? GO:0016020 ... P49257 24498414
    198703 3whu:A (2.6) BS03 CA ? GO:0016020 ... P49257 24498414
    198704 3whu:B (2.6) BS01 CA ? GO:0005509 ... Q8NI22 24498414
    198705 3whu:B (2.6) BS02 CA ? GO:0005509 ... Q8NI22 24498414
    198706 3whw:A (2.701) BS01 RUX 3.6.1.-
    3.6.1.56
    GO:0005515 ... P36639 24258965
    198707 3whw:B (2.701) BS01 RUX 3.6.1.-
    3.6.1.56
    GO:0005515 ... P36639 24258965
    198708 3whx:A (1.7) BS01 XPG N/A N/A N/A N/A
    198709 3whx:B (1.7) BS01 XPG N/A N/A N/A N/A
    198710 3wi1:A (1.931) BS01 MGT ? N/A P03428 24312396
    198711 3wi2:A (2.26) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24238902
    198712 3wi2:A (2.26) BS02 P98 3.1.4.17 GO:0004114 ... Q9Y233 24238902 MOAD: ic50=92nM
    198713 3wi2:B (2.26) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24238902
    198714 3wi2:B (2.26) BS02 P98 3.1.4.17 GO:0004114 ... Q9Y233 24238902 MOAD: ic50=92nM
    198715 3wi6:A (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826
    198716 3wi6:B (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826
    198717 3wi6:C (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826
    198718 3wi6:D (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826
    198719 3wi6:E (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826
    198720 3wi6:F (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826
    198721 3wi8:A (2.2) BS01 HNN 1.11.1.-
    1.7.-.-
    GO:0003009 ... P68082 24191678
    198722 3wi9:A (1.3) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198723 3wi9:A (1.3) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198724 3wi9:A (1.3) BS03 ZN 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198725 3wi9:A (1.3) BS04 ZN 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198726 3wia:A (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198727 3wia:A (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198728 3wia:B (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198729 3wia:B (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198730 3wia:C (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198731 3wia:C (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198732 3wia:D (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198733 3wia:D (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198734 3wia:E (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198735 3wia:E (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198736 3wia:F (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198737 3wia:F (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198738 3wia:G (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198739 3wia:G (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198740 3wia:H (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198741 3wia:H (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198742 3wia:I (1.77) BS01 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198743 3wia:I (1.77) BS02 CU 1.7.2.1 GO:0005507 ... Q5L1X8 24440558
    198744 3wic:A (2.6) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198745 3wic:A (2.6) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198746 3wic:B (2.6) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198747 3wic:B (2.6) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198748 3wic:C (2.6) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198749 3wic:C (2.6) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198750 3wic:D (2.6) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198751 3wic:D (2.6) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198752 3wid:A (2.25) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198753 3wid:A (2.25) BS02 NAP 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198754 3wid:B (2.25) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198755 3wid:B (2.25) BS02 NAP 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198756 3wid:C (2.25) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198757 3wid:C (2.25) BS02 NAP 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198758 3wid:D (2.25) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198759 3wid:D (2.25) BS02 NAP 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198760 3wie:A (2.33) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198761 3wie:A (2.33) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198762 3wie:A (2.33) BS03 DN4 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198763 3wie:A (2.33) BS04 BGC 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198764 3wie:B (2.33) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198765 3wie:B (2.33) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198766 3wie:B (2.33) BS03 DN4 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198767 3wie:B (2.33) BS04 BGC 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198768 3wie:C (2.33) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198769 3wie:C (2.33) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198770 3wie:C (2.33) BS03 DN4 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198771 3wie:C (2.33) BS04 BGC 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198772 3wie:D (2.33) BS01 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198773 3wie:D (2.33) BS02 ZN 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198774 3wie:D (2.33) BS03 DN4 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198775 3wie:D (2.33) BS04 BGC 1.1.1.47 GO:0005534 ... Q979W2 24816096
    198776 3wif:A (1.7) BS01 ON5 N/A N/A N/A N/A
    198777 3wif:B (1.7) BS01 ON5 N/A N/A N/A N/A
    198778 3wig:A (2.7) BS01 ANP 2.7.12.2 GO:0004672 ... Q02750 24746704
    198779 3wig:A (2.7) BS02 MG 2.7.12.2 GO:0004672 ... Q02750 24746704
    198780 3wig:A (2.7) BS03 CHU 2.7.12.2 GO:0004672 ... Q02750 24746704
    198781 3wik:A (1.995) BS01 LCT 2.7.11.1 GO:0004672 ... P68400 N/A BindingDB: IC50=26800nM
    198782 3wil:A (2.9) BS01 LCD 2.7.11.1 GO:0004672 ... P68400 N/A
    198783 3wim:A (2.6) BS01 peptide ? GO:0000045 ... O95166 N/A
    198784 3wio:A (2.1) BS01 H3M 3.1.-.- N/A Q10QA5 24131983
    198785 3wip:A (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198786 3wip:B (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198787 3wip:C (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198788 3wip:C (2.6) BS02 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198789 3wip:D (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198790 3wip:E (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198791 3wip:F (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198792 3wip:G (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198793 3wip:H (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198794 3wip:I (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198795 3wip:J (2.6) BS01 ACH ? GO:0004888 ... P58154 24637639 BindingDB: Ki=6309.57nM, Kd=458nM
    198796 3wiq:A (2.8) BS01 BGC 2.4.1.230 GO:0003824 ... A4XGP2 24255995
    198797 3wiq:A (2.8) BS02 GLC 2.4.1.230 GO:0003824 ... A4XGP2 24255995
    198798 3wiq:A (2.8) BS03 SO4 2.4.1.230 GO:0003824 ... A4XGP2 24255995
    198799 3wir:A (2.05) BS01 BGC 2.4.1.230 GO:0003824 ... A4XGP2 24255995
    198800 3wir:A (2.05) BS02 BGC 2.4.1.230 GO:0003824 ... A4XGP2 24255995

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).