SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    199601 3wqu:D (2.8) BS01 ATP ? GO:0005515 ... Q6GHQ0 24746687
    199602 3wqv:A (2.043) BS01 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498
    199603 3wqv:A (2.043) BS02 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498
    199604 3wqw:A (2.0) BS01 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498
    199605 3wqw:A (2.0) BS02 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498
    199606 3wqy:A (3.3) BS01 rna 6.1.1.7 GO:0000166 ... O28029 24919148
    199607 3wqy:A (3.3) BS02 A5A 6.1.1.7 GO:0000166 ... O28029 24919148
    199608 3wqy:B (3.3) BS01 A5A 6.1.1.7 GO:0000166 ... O28029 24919148
    199609 3wqz:A (3.489) BS01 rna 6.1.1.7 GO:0000166 ... O28029 24919148
    199610 3wqz:A (3.489) BS02 A5A 6.1.1.7 GO:0000166 ... O28029 24919148
    199611 3wqz:A (3.489) BS03 ZN 6.1.1.7 GO:0000166 ... O28029 24919148
    199612 3wqz:B (3.489) BS01 rna 6.1.1.7 GO:0000166 ... O28029 24919148
    199613 3wqz:B (3.489) BS02 A5A 6.1.1.7 GO:0000166 ... O28029 24919148
    199614 3wqz:B (3.489) BS03 ZN 6.1.1.7 GO:0000166 ... O28029 24919148
    199615 3wr0:A (1.16) BS01 CA 3.2.1.4 GO:0000272 ... Q9V2T0 N/A
    199616 3wr0:A (1.16) BS02 CA 3.2.1.4 GO:0000272 ... Q9V2T0 N/A
    199617 3wr1:A (3.5) BS01 HEM ? GO:0004601 ... P10780 N/A
    199618 3wr1:B (3.5) BS01 HEM ? GO:0004601 ... P10782 N/A
    199619 3wr2:A (1.75) BS01 3GP 4.6.1.24 GO:0003723 ... P81762 N/A
    199620 3wr2:B (1.75) BS01 3GP 4.6.1.24 GO:0003723 ... P81762 N/A
    199621 3wr2:C (1.75) BS01 3GP 4.6.1.24 GO:0003723 ... P81762 N/A
    199622 3wr2:D (1.75) BS01 3GP 4.6.1.24 GO:0003723 ... P81762 N/A
    199623 3wr2:E (1.75) BS01 3GP 4.6.1.24 GO:0003723 ... P81762 N/A
    199624 3wr2:F (1.75) BS01 3GP 4.6.1.24 GO:0003723 ... P81762 N/A
    199625 3wr3:A (2.5) BS01 FE2 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199626 3wr3:A (2.5) BS02 GDE 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199627 3wr3:B (2.5) BS01 GDE 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199628 3wr3:B (2.5) BS02 FE2 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199629 3wr4:A (2.4) BS01 FE 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199630 3wr4:A (2.4) BS02 GDE 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199631 3wr4:B (2.4) BS01 FE 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199632 3wr4:B (2.4) BS02 GDE 1.13.11.- GO:0008198 ... A0ACD6B9C2 24657997
    199633 3wr5:A (2.142) BS01 NAD 1.17.1.9 GO:0005737 ... Q76EB7 N/A
    199634 3wr5:B (2.142) BS01 NAD 1.17.1.9 GO:0005737 ... Q76EB7 N/A
    199635 3wr5:C (2.142) BS01 NAD 1.17.1.9 GO:0005737 ... Q76EB7 N/A
    199636 3wr7:A (2.5) BS01 SPD ? GO:0000287 ... A0A0M3KKU5 27163532
    199637 3wr7:A (2.5) BS02 COA ? GO:0000287 ... A0A0M3KKU5 27163532
    199638 3wr7:B (2.5) BS01 SPD ? GO:0000287 ... A0A0M3KKU5 27163532
    199639 3wr7:B (2.5) BS02 COA ? GO:0000287 ... A0A0M3KKU5 27163532
    199640 3wr7:C (2.5) BS01 SPD ? GO:0000287 ... A0A0M3KKU5 27163532
    199641 3wr7:C (2.5) BS02 COA ? GO:0000287 ... A0A0M3KKU5 27163532
    199642 3wr7:D (2.5) BS01 SPD ? GO:0000287 ... A0A0M3KKU5 27163532
    199643 3wr7:D (2.5) BS02 COA ? GO:0000287 ... A0A0M3KKU5 27163532
    199644 3wr8:A (2.25) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199645 3wr8:B (2.25) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199646 3wr9:A (2.4) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199647 3wr9:A (2.4) BS02 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199648 3wr9:A (2.4) BS03 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199649 3wr9:A (2.4) BS04 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199650 3wr9:B (2.4) BS01 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199651 3wr9:B (2.4) BS02 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199652 3wr9:B (2.4) BS03 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199653 3wr9:B (2.4) BS04 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199654 3wra:A (2.1) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199655 3wra:B (2.1) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199656 3wrb:A (2.1) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199657 3wrb:A (2.1) BS02 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199658 3wrb:A (2.1) BS03 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199659 3wrb:B (2.1) BS01 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199660 3wrb:B (2.1) BS02 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199661 3wrb:B (2.1) BS03 GDE 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199662 3wrc:A (2.4) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199663 3wrc:B (2.4) BS01 FE2 1.13.11.58 GO:0008198 ... A0ACD6B9C2 24657997
    199664 3wre:A (2.78) BS01 ZN 3.2.1.185 GO:0005975 ... E8MGH8 N/A
    199665 3wrg:A (2.23) BS01 FUB 3.2.1.185 GO:0005975 ... E8MGH8 N/A
    199666 3wrg:A (2.23) BS02 ZN 3.2.1.185 GO:0005975 ... E8MGH8 N/A
    199667 3wrh:A (1.62) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199668 3wrh:A (1.62) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199669 3wrh:E (1.62) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199670 3wrh:E (1.62) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199671 3wri:A (2.9) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199672 3wri:B (2.9) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199673 3wrj:A (1.85) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199674 3wrj:A (1.85) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199675 3wrj:E (1.85) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199676 3wrj:E (1.85) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199677 3wrk:A (2.609) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199678 3wrk:A (2.609) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199679 3wrk:D (2.609) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199680 3wrk:D (2.609) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199681 3wrl:A (1.65) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199682 3wrl:A (1.65) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199683 3wrl:E (1.65) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199684 3wrl:E (1.65) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199685 3wrm:A (1.95) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199686 3wrm:A (1.95) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199687 3wrm:F (1.95) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    199688 3wrm:F (1.95) BS02 CAM 1.14.15.1 GO:0004497 ... P00183 N/A
    199689 3wrn:A (1.52) BS01 ZN 3.1.21.-
    3.6.4.12
    N/A P03134 25528417
    199690 3wro:A (1.48) BS01 MN 3.1.21.-
    3.6.4.12
    N/A P03134 25528417
    199691 3wrr:A (1.62) BS01 CU 3.1.21.-
    3.6.4.12
    N/A P03134 25528417
    199692 3wrs:A (1.58) BS01 CO 3.1.21.-
    3.6.4.12
    N/A P03134 25528417
    199693 3wrx:A (2.5) BS01 AGS ? GO:0097367 ... A7M6E7 25092327
    199694 3wrx:A (2.5) BS02 MG ? GO:0097367 ... A7M6E7 25092327
    199695 3wrx:B (2.5) BS01 AGS ? GO:0097367 ... A7M6E7 25092327
    199696 3wrx:C (2.5) BS01 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199697 3wrx:C (2.5) BS02 MG 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199698 3wrx:C (2.5) BS03 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199699 3wrx:D (2.5) BS01 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199700 3wrx:D (2.5) BS02 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199701 3wry:A (2.3) BS01 AGS ? GO:0097367 ... A7M6E7 25092327
    199702 3wry:A (2.3) BS02 MG ? GO:0097367 ... A7M6E7 25092327
    199703 3wry:B (2.3) BS01 AGS ? GO:0097367 ... A7M6E7 25092327
    199704 3wry:B (2.3) BS02 MG ? GO:0097367 ... A7M6E7 25092327
    199705 3wry:C (2.3) BS01 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199706 3wry:C (2.3) BS02 MG 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199707 3wry:C (2.3) BS03 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199708 3wry:D (2.3) BS01 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199709 3wry:D (2.3) BS02 AGS 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199710 3wry:D (2.3) BS03 MG 2.1.1.-
    2.7.7.-
    2.7.7.48
    3.6.4.13
    GO:0005524 ... P03587 25092327
    199711 3wrz:A (1.8) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199712 3wrz:A (1.8) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199713 3wrz:B (1.8) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199714 3wrz:B (1.8) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199715 3ws0:A (2.0) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199716 3ws0:A (2.0) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199717 3ws0:B (2.0) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199718 3ws0:B (2.0) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199719 3ws0:C (2.0) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199720 3ws1:A (1.8) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199721 3ws1:A (1.8) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199722 3ws1:B (1.8) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199723 3ws1:B (1.8) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199724 3ws1:C (1.8) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199725 3ws2:A (2.1) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199726 3ws2:A (2.1) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199727 3ws2:B (2.1) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199728 3ws2:B (2.1) BS02 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199729 3ws2:C (2.1) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199730 3ws3:A (2.335) BS01 peptide ? N/A P01899 25063871
    199731 3ws3:C (2.335) BS01 peptide ? N/A P01899 25063871
    199732 3ws5:B (2.8) BS01 CA 3.5.2.6 GO:0008800 ... Q76LX5 25760604
    199733 3ws6:A (1.98) BS01 peptide ? N/A P01899 25063871
    199734 3ws6:B (1.98) BS01 peptide ? N/A P01899 25063871
    199735 3ws7:A (1.18) BS01 NAP 1.1.1.276 GO:0016491 ... A3MU08 29353380
    199736 3ws7:A (1.18) BS02 SO4 1.1.1.276 GO:0016491 ... A3MU08 29353380
    199737 3ws8:A (2.6) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24837154
    199738 3ws8:A (2.6) BS02 X4C 3.1.4.17 GO:0004114 ... Q9Y233 24837154 BindingDB: IC50=210nM
    199739 3ws8:B (2.6) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24837154
    199740 3ws8:B (2.6) BS02 X4C 3.1.4.17 GO:0004114 ... Q9Y233 24837154 BindingDB: IC50=210nM
    199741 3ws9:A (2.99) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24837154
    199742 3ws9:A (2.99) BS02 X4D 3.1.4.17 GO:0004114 ... Q9Y233 24837154 BindingDB: IC50=92nM
    199743 3ws9:B (2.99) BS01 ZN 3.1.4.17 GO:0004114 ... Q9Y233 24837154
    199744 3ws9:B (2.99) BS02 X4D 3.1.4.17 GO:0004114 ... Q9Y233 24837154 BindingDB: IC50=92nM
    199745 3wsa:A (2.9) BS01 RWZ 2.5.1.21 GO:0008610 ... P37268 25583723
    199746 3wsa:B (2.9) BS01 RWZ 2.5.1.21 GO:0008610 ... P37268 25583723
    199747 3wsa:C (2.9) BS01 RWZ 2.5.1.21 GO:0008610 ... P37268 25583723
    199748 3wsa:E (2.9) BS01 RWZ 2.5.1.21 GO:0008610 ... P37268 25583723
    199749 3wsb:A (2.4) BS01 FPS 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199750 3wsb:A (2.4) BS02 RWZ 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199751 3wsb:B (2.4) BS01 FPS 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199752 3wsb:B (2.4) BS02 RWZ 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199753 3wsb:C (2.4) BS01 FPS 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199754 3wsb:C (2.4) BS02 RWZ 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199755 3wsb:D (2.4) BS01 FPS 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199756 3wsb:D (2.4) BS02 RWZ 2.5.1.21 GO:0008610 ... Q4CWB4 N/A
    199757 3wsd:A (2.5) BS01 FE N/A N/A N/A 24931373
    199758 3wsd:A (2.5) BS02 FE N/A N/A N/A 24931373
    199759 3wsd:B (2.5) BS01 FE N/A N/A N/A 24931373
    199760 3wsd:B (2.5) BS02 FE N/A N/A N/A 24931373
    199761 3wsd:C (2.5) BS01 FE N/A N/A N/A 24931373
    199762 3wsd:C (2.5) BS02 FE N/A N/A N/A 24931373
    199763 3wsd:D (2.5) BS01 FE N/A N/A N/A 24931373
    199764 3wsd:D (2.5) BS02 FE N/A N/A N/A 24931373
    199765 3wsd:E (2.5) BS01 FE N/A N/A N/A 24931373
    199766 3wsd:E (2.5) BS02 FE N/A N/A N/A 24931373
    199767 3wsd:F (2.5) BS01 FE N/A N/A N/A 24931373
    199768 3wsd:F (2.5) BS02 FE N/A N/A N/A 24931373
    199769 3wse:A (2.5) BS01 FE2 N/A N/A N/A 24931373
    199770 3wse:A (2.5) BS02 FE2 N/A N/A N/A 24931373
    199771 3wse:B (2.5) BS01 FE2 N/A N/A N/A 24931373
    199772 3wse:B (2.5) BS02 FE2 N/A N/A N/A 24931373
    199773 3wse:C (2.5) BS01 FE2 N/A N/A N/A 24931373
    199774 3wse:C (2.5) BS02 FE2 N/A N/A N/A 24931373
    199775 3wse:D (2.5) BS01 FE2 N/A N/A N/A 24931373
    199776 3wse:D (2.5) BS02 FE2 N/A N/A N/A 24931373
    199777 3wse:E (2.5) BS01 FE2 N/A N/A N/A 24931373
    199778 3wse:E (2.5) BS02 FE2 N/A N/A N/A 24931373
    199779 3wse:F (2.5) BS01 FE2 N/A N/A N/A 24931373
    199780 3wse:F (2.5) BS02 FE2 N/A N/A N/A 24931373
    199781 3wsf:A (2.0) BS01 FE N/A N/A N/A 24931373
    199782 3wsf:B (2.0) BS01 FE N/A N/A N/A 24931373
    199783 3wsf:C (2.0) BS01 FE N/A N/A N/A 24931373
    199784 3wsf:D (2.0) BS01 FE N/A N/A N/A 24931373
    199785 3wsf:E (2.0) BS01 FE N/A N/A N/A 24931373
    199786 3wsf:F (2.0) BS01 FE N/A N/A N/A 24931373
    199787 3wsg:A (1.996) BS01 FE2 N/A N/A N/A 24931373
    199788 3wsg:B (1.996) BS01 FE2 N/A N/A N/A 24931373
    199789 3wsg:C (1.996) BS01 FE2 N/A N/A N/A 24931373
    199790 3wsg:D (1.996) BS01 FE2 N/A N/A N/A 24931373
    199791 3wsg:E (1.996) BS01 FE2 N/A N/A N/A 24931373
    199792 3wsg:F (1.996) BS01 FE2 N/A N/A N/A 24931373
    199793 3wsh:A (2.8) BS01 FE N/A N/A N/A 24931373
    199794 3wsh:B (2.8) BS01 FE N/A N/A N/A 24931373
    199795 3wsh:C (2.8) BS01 FE N/A N/A N/A 24931373
    199796 3wsh:D (2.8) BS01 FE N/A N/A N/A 24931373
    199797 3wsh:E (2.8) BS01 FE N/A N/A N/A 24931373
    199798 3wsh:F (2.8) BS01 FE N/A N/A N/A 24931373
    199799 3wsh:G (2.8) BS01 FE N/A N/A N/A 24931373
    199800 3wsh:H (2.8) BS01 FE N/A N/A N/A 24931373

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).