LOMETS results for example

[Click result.zip to download all results on this page]

Input Sequence in FASTA format

>LM975179036 (167 residues)
QDAQHSFRRLLKASEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDI
VNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSGATLILQVASLSGGRLRLTGEE
RIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC

Predicted Secondary Structure

Sequence	20 40 60 80 100 120 140 160 \| \| \| \| \| \| \| \| QDAQHSFRRLLKASEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSGATLILQVASLSGGRLRLTGEERIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC
Prediction	CHHHHHHHHHHHCCCCCCSSSCCCCCCCCCCCCHHHHHHHHHHCCCCCCSSSCCCCCCHHHHHHHHHHHCCCCCCCHHHCCSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHCCCCCCCSSSSSSSCCSSSSSCCCCSSSSC
Conf.Score	78999999999857999578767777899887899999999984899867867777899999999998599988996679899867887888778888859999958888998686589755789899999999985657998668999959979995787778759
	H:Helix; S:Strand; C:Coil

Predicted Solvent Accessibility

Sequence	20 40 60 80 100 120 140 160 \| \| \| \| \| \| \| \| QDAQHSFRRLLKASEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSGATLILQVASLSGGRLRLTGEERIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC
Prediction	85214102300400431433506643643430210000000000145030203552537302520322140432643640220003454425413323000000004517657040423433414036401520472354100000000004520000112141458
	Values range from 0 (buried residue) to 8 (highly exposed residue)

Top 10 Templates Identified by LOMETS

Rank

PDB
Hit

ID1

ID2

Cov

Norm.
Zscore

Download
Alignment

                  20                  40                  60                  80                 100                 120                 140                 160

                   |                   |                   |                   |                   |                   |                   |                   |

Sec.Str.
Sol.Acc.
Seq

CHHHHHHHHHHHCCCCCCSSSCCCCCCCCCCCCHHHHHHHHHHCCCCCCSSSCCCCCCHHHHHHHHHHHCCCCCCCHHHCCSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHCCCCCCCSSSSSSSCCSSSSSCCCCSSSSC
85214102300400431433506643643430210000000000145030203552537302520322140432643640220003454425413323000000004517657040423433414036401520472354100000000004520000112141458
QDAQHSFRRLLKASEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSGATLILQVASLSGGRLRLTGEERIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC

4xb6D

0.16

0.96

2.29

CEthreader

QTKRMIRRAILKAVIPGYQVPFGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLT--EDQIIIFQVPIPYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPA-----LQLFGAGRRIYAVPPFTRVESL

4xb6D

0.17

0.16

0.93

0.81

SparksX

QTKRMIRRAILKAAIPGYQVPFGGREMPMPYWGTGGIQLTASVIGESDVLKVIDQGADDTIRNFFKRVTGVNTTERTDDATVIQTRH-----RIPETPLQIIIFQVPIIATTYVKVNGRYVMDPPIPKFDNPKMDMMPAL------QLFGAGRRIYAVPPFTRVESL

4xb6D

0.16

0.15

0.94

0.46

HHpred

-TKRMIRRAILKAAIPGYQVPFGGRMPMPYGWGTGGIQLTASVIGESDVLKIDQGADDVSIRNFFKRVTGVNTTERTDDATV--IQTRHRIPE-TPLTDQIIIFQVPIPEPGHVKVNGRYVMPSPIPKFDNPKMDMMPAL------QLFGAGKRIYAVPPFTRVESL

4xb6D

0.16

0.95

0.65

FFAS3D

--KRMIRRAILKAAIPGYQVPFGGREMPMPGWGTGGIQLTASVIGESDVLKVDDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPL--TEDQIIIFQVPTTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPAL-----QLFGAGRRIYAVPPFTRVESL

5cefA1

0.14

0.11

0.79

0.64

MUSTER

TVGQRFIELLAAH--PYALHALGASSRSAGQQYARVV-------------WKLPSPIPDAVRHM-VVHECRPDAPGFAECGVVFSDADVAGDIENAFADLVVYSNAKNYRRDP----LCPLIVPLVNPSHLSIIPYQREQ--LGLK-----KGYIVTNA--------

1rkqA

0.12

1.00

0.69

Neff-MUSTER

PAVKNAIAAARARPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTG

1vl7A

0.07

0.05

0.76

0.53

PPAS

------YAGFIQEFQSAIISTISEQGIP--------GSYAPFVIDDAKNIYIYVSGLAVHTKNIEA-----------PLVNVLFVDDEAKTN--------------QIFARRRLSFDCTATLIERESQKWNQVVDQFQERFGQIIEVLRGLADRIFQL-TPKEGRFV

4xb6D

0.17

0.16

0.93

0.61

HHsearch

QTKRMIRRAILKAAIPGYQVPFGGR-EMPYGWGTGGIQLTASVIGESDVLKVIDQGADVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETP---LTDQIIIFQVPIPEPLYVKVNGRYVMPSPIPK--FDNPKMDMMPA---L-QLFGAGRRIYAVPPFTRVES-

4heqA

0.13

0.10

0.74

0.70

SP3

EGAEAIAKTLNSE---GETTVVNVADVTAPGLAEGYDVVLLG-----CSTWGDDEIEQEDFVPLYEDLDRAGLKDKK-VGVFGCGDSSYTYFCGAVDV-----IE-KKAEELGATLVASSLKIDGEPLDWAREVLARV-----------------------------

1s8eA1

0.12

0.11

0.95

0.62

PROSPECTOR2

MEFAEAFKNALEQENVDFILILFHSSRPSPGTLKKAIALLQIPKEHSIPVFAVRTQRGPSVLNLLEDFGLVYVIEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAW---------FEANKEILVREVSEARGELPEGYLYYALYSGSPVVYPGSLKPRFV

(a)	Templates are ranked in descending order of the following score: score(i,j)=Z(i,j)/Z₀(i)·conf(i)+seqid(i,j), where Z(i,j) is the Z-score of j-th template of i-th server; Z₀(i) is the Z-score cutoff for defining good/bad templates for the i-th server; conf(i) is the confidence of i-th server which is defined as the average TM-score to native of all predictions calculated from a large-scale benchmark test; and seqid(i,j) is the sequence identity to query of j-th template of i-th server. (See here for details)
(b)	ID1 is the number of template residues identical to query divided by number of aligned residues.
(c)	ID2 is the number of template residues identical to query divided by query sequence length.
(d)	Cov is equal the number of aligned template residues divided by query sequence length.
(e)	Norm. Zscore is the normalized Z-score of the threading alignments. A normalized Z-score ≥1 means a good alignment.
(f)	Download Alignment list the threading program used to identify the template provide the 3D structure of aligned regions of threading templates.
(g)	Sec.Str. is predicted secondary structure, with H, S and C representing helix, strand, and coil, respectively.
(h)	Sol.Acc. is predicted solvent accessibility, where values range from 0 (buried residue) to 8 (highly exposed residue)
(i)	Images of the top 10 PDB hits are listed below, together with the threading programs used to detect them:

4xb6D
CEthreader,SparksX,
HHpred,FFAS3D,
HHsearch

5cefA1
MUSTER

1rkqA
Neff-MUSTER

1vl7A
PPAS

4heqA
SP3

1s8eA1
PROSPECTOR2

Full-Length Models Built on Top Templates

LOMETS uses MODELLER to construct full-length models from top 5 templates. By dragging your mouse on the images, you rotate and zoom the structure.

Download Model 1
Download Model 2
Download Model 3
Download Model 4
Download Model 5

Top Templates and Function Annotation from Component Threading Programs

LOMETS combines templates from multiple individual threading programs, as listed in the following tables.

(a)	Templates are ranked in descending order of normalized Z-score, as explained by (e) below.
(b)	ID1 is the number of template residues identical to query divided by number of aligned residues.
(c)	ID2 is the number of template residues identical to query divided by query sequence length.
(d)	Cov is equal the number of aligned template residues divided by query sequence length.
(e)	Norm. Zscore is the normalized Z-score of the threading alignments. A normalized Z-score ≥1 means a good alignment.
(f)	Download Alignment provides the structure of aligned region for each template.
(g)	Gene Ontology (GO) term and Enzyme Commission (EC) number list the function annotations for template proteins, as collected by BioLiP database.

Templates from CEthreader

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	4xb6D	0.16	0.16	0.96	2.29	template_1	GO:0016829,GO:0051539,GO:0098848,GO:0051536,GO:0046872,GO:0005515	GO:0019700	GO:1904176	4.7.1.1
2	3e77A	0.11	0.11	1.00	0.62	template_2	GO:0003824,GO:0004648,GO:0008483,GO:0016740	GO:0006564,GO:0008652,GO:0008615	GO:0070062,GO:0005829	2.6.1.52
3	1yhyA1	0.07	0.07	0.96	0.61	template_3	GO:0000287,GO:0030976,GO:0003824,GO:0003984,GO:0050660	GO:0009082		2.2.1.6
4	5n2iA	0.09	0.08	0.89	0.50	template_4	GO:0016651,GO:0050661,GO:0070967,GO:0000166,GO:0016491	GO:0006740,GO:0055114		1.6.99.-
5	3w24A1	0.08	0.08	0.96	0.48	template_5	GO:0004553	GO:0005975		3.2.1.8
6	5xgbA3	0.12	0.11	0.91	0.48	template_6		GO:0006355
7	4yzpA1	0.12	0.12	1.00	0.48	template_7	GO:0004553,GO:0016798	GO:0005975		3.2.1.4
8	4zeoH2	0.08	0.07	0.85	0.46	template_8	GO:0003743	GO:0044237,GO:0006413
9	5j1sB	0.11	0.11	1.00	0.45	template_9
10	2ji8A1	0.06	0.05	0.96	0.45	template_10	GO:0003824,GO:0030976,GO:0000287,GO:0008949,GO:0046872,GO:0016831,GO:0016829,GO:0000166,GO:0042802,GO:0043531	GO:0033611		4.1.1.8

Templates from HHpred

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	4xb6D	0.16	0.15	0.94	0.46	template_1	GO:0016829,GO:0051539,GO:0098848,GO:0051536,GO:0046872,GO:0005515	GO:0019700	GO:1904176	4.7.1.1

Templates from SparksX

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	4xb6D	0.17	0.16	0.93	0.81	template_1	GO:0016829,GO:0051539,GO:0098848,GO:0051536,GO:0046872,GO:0005515	GO:0019700	GO:1904176	4.7.1.1
2	3clkB1	0.11	0.08	0.75	0.67	template_2
3	1rf6A1	0.12	0.11	0.93	0.64	template_3	GO:0016765,GO:0003866,GO:0003824,GO:0016740,GO:0005515	GO:0009073,GO:0009423,GO:0008652	GO:0005737	2.5.1.19
4	5ijgA1	0.09	0.08	0.90	0.61	template_4	GO:0030170,GO:0003824,GO:0003962,GO:0016740			2.5.1.48
5	2pqcA1	0.10	0.09	0.94	0.61	template_5	GO:0016765,GO:0003866,GO:0003824,GO:0016740	GO:0009073,GO:0009423,GO:0008652,GO:0009635	GO:0005737	2.5.1.19
6	2ch1A	0.13	0.11	0.89	0.61	template_6	GO:0008453,GO:0004760,GO:0003824
7	1nsjA	0.08	0.08	0.93	0.61	template_7	GO:0004640,GO:0003824,GO:0016853	GO:0006568,GO:0000162,GO:0008652,GO:0009073		5.3.1.24
8	5ktkA	0.11	0.10	0.86	0.59	template_8
9	3roiA1	0.11	0.10	0.89	0.59	template_9	GO:0016765,GO:0003866,GO:0003824,GO:0016740	GO:0009073,GO:0009423,GO:0008652	GO:0005737	2.5.1.19
10	2yvwA1	0.11	0.10	0.90	0.58	template_10	GO:0008760,GO:0016765,GO:0003824,GO:0016740	GO:0019277,GO:0009252,GO:0007049,GO:0051301,GO:0008360,GO:0071555	GO:0005737	2.5.1.7

Templates from FFAS3D

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	4xb6D	0.16	0.16	0.95	0.65	template_1	GO:0016829,GO:0051539,GO:0098848,GO:0051536,GO:0046872,GO:0005515	GO:0019700	GO:1904176	4.7.1.1
2	3db0B	0.09	0.06	0.68	0.54	template_2	GO:0048037
3	2arzA1	0.16	0.12	0.77	0.52	template_3	GO:0048037
4	1vl7A	0.05	0.04	0.69	0.48	template_4	GO:0048037
5	3ri6A1	0.16	0.13	0.81	0.47	template_5	GO:0030170,GO:0003824
6	4tpsA	0.12	0.08	0.71	0.47	template_6		GO:0008156,GO:0030435
7	5z0yA1	0.15	0.11	0.74	0.47	template_7	GO:0004372,GO:0030170,GO:0003824,GO:0008168,GO:0016740	GO:0019264,GO:0035999,GO:0032259,GO:0006730		2.1.2.1
8	2fyfA1	0.11	0.08	0.78	0.46	template_8	GO:0004648,GO:0048037,GO:0003824,GO:0008453,GO:0004760,GO:0008483,GO:0016740,GO:0030170	GO:0006564,GO:0009058,GO:0019265,GO:0008652,GO:0008615	GO:0005777,GO:0005737,GO:0005576,GO:0005886	2.6.1.52
9	2ig6A	0.10	0.07	0.74	0.46	template_9	GO:0048037,GO:0000166
10	3kgxB1	0.17	0.13	0.79	0.46	template_10	GO:0003824,GO:0008453,GO:0004760,GO:0016597,GO:0008483,GO:0016740,GO:0005102,GO:0030170,GO:0042802,GO:0042803,GO:0043621	GO:0046487,GO:0046724,GO:0019265,GO:0042866,GO:0051384,GO:0051591,GO:0009436,GO:0019448,GO:0042853,GO:0007219	GO:0005777,GO:0005739,GO:0005759,GO:0005782,GO:0043231	2.6.1.44,2.6.1.51

Templates from Neff-MUSTER

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	1rkqA	0.12	0.12	1.00	0.69	template_1	GO:0016787,GO:0050308,GO:0000287,GO:0016791,GO:0046872	GO:0016311	GO:0005829	3.1.3.23
2	1nf2A	0.09	0.09	1.00	0.61	template_2	GO:0000287,GO:0016791,GO:0016787	GO:0016311	GO:0005829
3	3fvvA	0.13	0.13	0.96	0.59	template_3
4	3qjaA	0.11	0.10	0.90	0.57	template_4	GO:0004425,GO:0003824,GO:0004640,GO:0016831,GO:0016829,GO:0000287	GO:0006568,GO:0000162,GO:0008652,GO:0009073,GO:0046391	GO:0005618,GO:0005886	4.1.1.48
5	1l7nB	0.10	0.10	0.92	0.57	template_5	GO:0004647,GO:0016791,GO:0000287,GO:0016787,GO:0046872	GO:0006564,GO:0016311,GO:0008652	GO:0005737	3.1.3.3
6	3l7yA	0.08	0.08	0.98	0.56	template_6	GO:0016787,GO:0046872
7	1vlwB	0.11	0.10	0.89	0.56	template_7	GO:0016829,GO:0003824			4.1.2.14,4.1.3.16
8	5b69A	0.11	0.10	0.95	0.55	template_8	GO:0016765,GO:0000287,GO:0047294,GO:0046872,GO:0016740	GO:0006650,GO:0006629,GO:0008654,GO:0046474	GO:0005737	2.5.1.41
9	4dydA1	0.12	0.11	0.87	0.55	template_9	GO:0003857,GO:0016491,GO:0070403,GO:0000166	GO:0006631,GO:0055114
10	3niwA	0.11	0.11	0.95	0.55	template_10	GO:0016787,GO:0000287,GO:0016791,GO:0046872	GO:0016311	GO:0005829

Templates from MUSTER

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	5cefA1	0.14	0.11	0.79	0.64	template_1	GO:0004073,GO:0050661,GO:0016620,GO:0051287,GO:0046983	GO:0006520,GO:0055114,GO:0008652,GO:0009086,GO:0009088,GO:0009090		1.2.1.11
2	4jejA	0.16	0.15	0.96	0.62	template_2	GO:0047294,GO:0046872,GO:0016740,GO:0000287,GO:0016765	GO:0006629,GO:0008654,GO:0046474,GO:0006650	GO:0005737	2.5.1.41
3	3ovpA	0.11	0.10	0.89	0.61	template_3	GO:0016857,GO:0003824,GO:0004750,GO:0046872,GO:0016853,GO:0042802,GO:0042803	GO:0005975,GO:0006098,GO:0044262,GO:0019323,GO:0009052	GO:0005829,GO:0070062	5.1.3.1
4	1wdlA2	0.11	0.09	0.83	0.61	template_4	GO:0003824,GO:0003857,GO:0016491,GO:0004165,GO:0004300,GO:0008692,GO:0016853,GO:0016829,GO:0005515	GO:0006631,GO:0055114,GO:0009062,GO:0006635,GO:0016042,GO:0006629,GO:0008152	GO:0036125	1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8
5	3zgyA1	0.15	0.13	0.83	0.59	template_5	GO:0050661,GO:0016491,GO:0000166	GO:0055114	GO:0016020,GO:0016021	1.5.1.-
6	5ujmE1	0.09	0.07	0.82	0.59	template_6	GO:0003688,GO:0005524,GO:0000166,GO:0005515,GO:0003674	GO:0006260,GO:0006270,GO:0000082	GO:0000808,GO:0005634,GO:0005664,GO:0000784,GO:0005829,GO:0005654
7	3mggA2	0.13	0.11	0.83	0.59	template_7	GO:0008168,GO:0016740	GO:0032259		2.1.1.-
8	4ol9A1	0.14	0.11	0.83	0.59	template_8	GO:0008677,GO:0016491,GO:0050661	GO:0015940,GO:0055114,GO:0033317	GO:0005737,GO:0005829	1.1.1.169
9	6aphA1	0.06	0.05	0.80	0.57	template_9	GO:0004013,GO:0016787,GO:0051287	GO:0006730,GO:0019510	GO:0005737	3.3.1.1
10	1x77A	0.10	0.08	0.84	0.57	template_10	GO:0016491,GO:0010181,GO:0052873,GO:0000166,GO:0016655,GO:0042802,GO:0042803,GO:0003955	GO:0055114	GO:0005829

Templates from HHsearch

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	4xb6D	0.17	0.16	0.93	0.61	template_1	GO:0016829,GO:0051539,GO:0098848,GO:0051536,GO:0046872,GO:0005515	GO:0019700	GO:1904176	4.7.1.1
2	2nn6H3	0.17	0.05	0.29	0.30	template_2	GO:0003723,GO:0005515,GO:0004532,GO:0000175,GO:0008312	GO:0034475,GO:0071051,GO:0000467,GO:0071038,GO:0043928,GO:0071034,GO:0034427,GO:0071049,GO:0071035,GO:0006364,GO:0030307,GO:0043488	GO:0000178,GO:0000176,GO:0000177,GO:0005634,GO:0005737,GO:0005730,GO:0005654,GO:0005829	3.1.13.-
3	4hlbA	0.21	0.05	0.25	0.29	template_3
4	4ifdD2	0.12	0.04	0.31	0.28	template_4	GO:0003723,GO:0005515,GO:0003674	GO:0043628,GO:0071051,GO:0034427,GO:0070478,GO:0070481,GO:0070651,GO:0016075,GO:0034475,GO:0071028,GO:0006364,GO:0071038,GO:0000467,GO:0071035,GO:0071042	GO:0000176,GO:0000177,GO:0005730,GO:0000178,GO:0005634,GO:0005737
5	4dioA2	0.13	0.10	0.75	0.25	template_5	GO:0016491,GO:0016597,GO:0016743	GO:0055114,GO:0006520		1.6.1.2
6	5xyuJ	0.12	0.06	0.50	0.18	template_6	GO:0003735,GO:0003723,GO:0000049	GO:0006412	GO:0005840,GO:0005622
7	1j3lA	0.16	0.12	0.77	0.18	template_7	GO:0008428,GO:0047443,GO:0016829,GO:0046872	GO:0051252,GO:0043086		4.1.1.112,4.1.3.17
8	2nn6B2	0.10	0.03	0.31	0.18	template_8	GO:0003723,GO:0005515,GO:0004532,GO:0017091,GO:0000175	GO:0090503,GO:0016075,GO:0034475,GO:0071051,GO:0071028,GO:0034427,GO:0006364,GO:0045006,GO:0000460,GO:0000956,GO:0030307,GO:0051607,GO:0071044,GO:0043488,GO:0043928	GO:0000176,GO:0000177,GO:0005730,GO:0000178,GO:0005634,GO:0005737,GO:0005829,GO:0045111,GO:0035327,GO:0005654	3.1.13.-
9	2du3A1	0.11	0.08	0.74	0.18	template_9	GO:0000049,GO:0004812,GO:0005524,GO:0016874,GO:0000166,GO:0042802	GO:0043039,GO:0006412		6.1.1.27
10	2jxpA	0.13	0.10	0.71	0.17	template_10		GO:0043165	GO:0019867

Templates from SP3

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	4heqA	0.13	0.10	0.74	0.70	template_1	GO:0010181,GO:0009055	GO:0022900,GO:0055114
2	5tgzA2	0.11	0.08	0.74	0.70	template_2	GO:0004930,GO:0004949,GO:0009055,GO:0010181	GO:0007186,GO:0022900,GO:0055114	GO:0016021
3	3ovpA	0.12	0.10	0.82	0.69	template_3	GO:0016857,GO:0003824,GO:0004750,GO:0046872,GO:0016853,GO:0042802,GO:0042803	GO:0005975,GO:0006098,GO:0044262,GO:0019323,GO:0009052	GO:0005829,GO:0070062	5.1.3.1
4	2y4oA3	0.13	0.08	0.66	0.68	template_4	GO:0047475,GO:0016874,GO:0046872,GO:0000166,GO:0003824	GO:0010124		6.2.1.30
5	5buqA3	0.15	0.09	0.61	0.66	template_5	GO:0003824,GO:0005524,GO:0008756,GO:0016874,GO:0000166	GO:0009234		6.2.1.26
6	3kaqA	0.15	0.11	0.74	0.66	template_6	GO:0009055,GO:0010181	GO:0022900,GO:0055114
7	5zkpA2	0.12	0.09	0.74	0.65	template_7	GO:0004930,GO:0009055,GO:0010181,GO:0004992	GO:0007186,GO:0006935,GO:0022900,GO:0055114	GO:0016021
8	1bu5A	0.12	0.09	0.73	0.64	template_8	GO:0010181,GO:0009055	GO:0055114,GO:0022900
9	3gggD1	0.13	0.10	0.75	0.62	template_9	GO:0004665,GO:0008977,GO:0070403,GO:0000166	GO:0006571,GO:0055114
10	3qovA3	0.07	0.04	0.62	0.62	template_10

Templates from PPAS

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	1vl7A	0.07	0.05	0.76	0.53	template_1	GO:0048037
2	5e46A	0.11	0.09	0.84	0.53	template_2	GO:0016829
3	5wlyA	0.07	0.07	0.96	0.50	template_3	GO:0016462,GO:0008758,GO:0016787,GO:0046872,GO:0030145	GO:0009245,GO:0006629	GO:0005737,GO:0019897,GO:0016020,GO:0005886	3.6.1.54
4	4jejA	0.14	0.14	0.96	0.50	template_4	GO:0047294,GO:0046872,GO:0016740,GO:0000287,GO:0016765	GO:0006629,GO:0008654,GO:0046474,GO:0006650	GO:0005737	2.5.1.41
5	3q58A	0.10	0.09	0.92	0.49	template_5	GO:0047465,GO:0003824,GO:0009385,GO:0016853,GO:0016857	GO:0006051,GO:0019262,GO:0005975		5.1.3.9
6	2wtbA2	0.11	0.10	0.95	0.49	template_6	GO:0003857,GO:0004300,GO:0008692,GO:0004165,GO:0003824,GO:0016491,GO:0016853,GO:0016829,GO:0016508	GO:0006631,GO:0055114,GO:0006635,GO:0006629,GO:0008152	GO:0005777,GO:0009514,GO:0005618,GO:0005730,GO:0009506,GO:0005829	1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8
7	4xaaA	0.11	0.10	0.94	0.49	template_7
8	1su1A	0.15	0.13	0.85	0.49	template_8	GO:0016787,GO:0046872,GO:0008081,GO:0030145,GO:0042802	GO:0051289	GO:0005829
9	5ujmE1	0.10	0.08	0.84	0.49	template_9	GO:0003688,GO:0005524,GO:0000166,GO:0005515,GO:0003674	GO:0006260,GO:0006270,GO:0000082	GO:0000808,GO:0005634,GO:0005664,GO:0000784,GO:0005829,GO:0005654
10	3ihbA2	0.18	0.14	0.77	0.47	template_10	GO:0004359,GO:0016787	GO:0006541		3.5.1.2

Templates from PROSPECTOR2

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	1s8eA1	0.12	0.11	0.95	0.62	template_1	GO:0016787
2	5zjbA	0.08	0.07	0.94	0.60	template_2	GO:0009385,GO:0047465,GO:0016853,GO:0016857,GO:0003824	GO:0019262,GO:0005975,GO:0006051		5.1.3.9
3	5udbE1	0.13	0.11	0.86	0.58	template_3	GO:0003688,GO:0005524,GO:0000166,GO:0005515	GO:0006260,GO:0006270,GO:0006267,GO:0030466,GO:0031938	GO:0000808,GO:0005634,GO:0005664,GO:0005656,GO:0031261
4	2wtbA2	0.11	0.11	0.96	0.58	template_4	GO:0003857,GO:0004300,GO:0008692,GO:0004165,GO:0003824,GO:0016491,GO:0016853,GO:0016829,GO:0016508	GO:0006631,GO:0055114,GO:0006635,GO:0006629,GO:0008152	GO:0005777,GO:0009514,GO:0005618,GO:0005730,GO:0009506,GO:0005829	1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8
5	5zknA	0.10	0.09	0.92	0.58	template_5	GO:0047465,GO:0003824,GO:0009385,GO:0016853,GO:0016857	GO:0006051,GO:0006053,GO:0019262,GO:0005975	GO:0005829	5.1.3.9
6	4iusA	0.17	0.16	0.94	0.58	template_6	GO:0016740			2.3.1.128
7	4utuA	0.11	0.10	0.95	0.58	template_7	GO:0047465,GO:0003824,GO:0009385,GO:0016853,GO:0016857	GO:0006051,GO:0019262,GO:0005975		5.1.3.9
8	1yxyA	0.13	0.12	0.90	0.58	template_8	GO:0047465,GO:0003824,GO:0009385,GO:0016853,GO:0016857	GO:0006051,GO:0019262,GO:0005975		5.1.3.9
9	4jejA	0.11	0.10	0.95	0.56	template_9	GO:0047294,GO:0046872,GO:0016740,GO:0000287,GO:0016765	GO:0006629,GO:0008654,GO:0046474,GO:0006650	GO:0005737	2.5.1.41
10	3ovpA	0.11	0.10	0.94	0.56	template_10	GO:0016857,GO:0003824,GO:0004750,GO:0046872,GO:0016853,GO:0042802,GO:0042803	GO:0005975,GO:0006098,GO:0044262,GO:0019323,GO:0009052	GO:0005829,GO:0070062	5.1.3.1

Templates from PRC

Rank	PDB Hit	ID1	ID2	Cov	Norm. Zscore	Download Alignment	Gene_Ontology_(GO)_term (Molecular_Function)	Gene_Ontology_(GO)_term (Biological_Process)	Gene_Ontology_(GO)_term (Cellular_Componenet)	Enzyme_Commission (EC)_number
1	5jqkA3	0.12	0.07	0.54	0.14	template_1	GO:0016787,GO:0070006
2	5wcoA	0.16	0.07	0.41	0.12	template_2
3	2f40A	0.12	0.01	0.10	0.12	template_3
4	1gefA	0.20	0.05	0.25	0.12	template_4	GO:0008821,GO:0003676,GO:0004518,GO:0003677,GO:0004519,GO:0016787,GO:0046872,GO:0000287	GO:0090305,GO:0006974,GO:0006310,GO:0006281		3.1.22.4
5	4xb6D	0.14	0.08	0.59	0.11	template_5	GO:0016829,GO:0051539,GO:0098848,GO:0051536,GO:0046872,GO:0005515	GO:0019700	GO:1904176	4.7.1.1
6	3k0bA	0.10	0.07	0.65	0.11	template_6	GO:0003676,GO:0008168,GO:0003723	GO:0032259
7	2invA	0.13	0.02	0.14	0.11	template_7	GO:0016740			4.2.2.18
8	1fcfA	0.17	0.12	0.72	0.11	template_8	GO:0008236	GO:0006508		3.4.21.102
9	2nn6H3	0.17	0.03	0.18	0.11	template_9	GO:0003723,GO:0005515,GO:0004532,GO:0000175,GO:0008312	GO:0034475,GO:0071051,GO:0000467,GO:0071038,GO:0043928,GO:0071034,GO:0034427,GO:0071049,GO:0071035,GO:0006364,GO:0030307,GO:0043488	GO:0000178,GO:0000176,GO:0000177,GO:0005634,GO:0005737,GO:0005730,GO:0005654,GO:0005829	3.1.13.-
10	4mjzA	0.10	0.08	0.81	0.11	template_10	GO:0004590,GO:0016757,GO:0016829,GO:0016740,GO:0003824	GO:0006207,GO:0006221		4.1.1.23

[Click result.zip to download all results on this page]

References:
1.	W Zheng, C Zhang, Q Wuyun, R Pearce, Y Li, Y Zhang. LOMETS2: improved meta-threading server for fold-recognition and structure-based function annotation for distant-homology proteins. Nucleic Acids Research, 47: W429-W436 (2019).
2.	S Wu, Y Zhang. LOMETS: A local meta-threading-server for protein structure prediction. Nucleic Acids Research, 35: 3375-3382 (2007).