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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 27)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
2601 PF17267
(DUF5333)
 click to view
Estimated TM-score=0.60;
hard target.		 >Family of unknown function (DUF5333) (Length=110)
PALRDVPEIENGLFAVAIADEIRDHCDSISARLMRAIGVLQRLKSRANALGYSDAEIRAYIESDAEKARMRAKGEAFLSQ
NGVRYGQPETFCAFGRSEIQKNSAIGALLR
2602 PF17179
(Fer4_22)
 click to view
Estimated TM-score=0.60;
easy target.		 >4Fe-4S dicluster domain (Length=95)
RCLSCANCTMVCPTCFCSNIEDTTDLTGNHTERWRRWDSCFSLDYSKVAGGNFRTSVKARYRQWMTHKLASWIDQFGISG
CVGCGRCITWCPVGI
2603 PF17094
(UPF0715)
 click to view
Estimated TM-score=0.60;
hard target.		 >Uncharacterised protein family (UPF0715) (Length=119)
YVYTLAFSSLSFGLIFGLYLFVYSGFMAIALVTIAIIAFYALITYLVFAAPLQVWLRRRRRKFSLINFLIYIAVAFSAVF
LFWFVDYPPNALTMFRSFEYYIMSIVAAFIYWFWDSIFL
2604 PF17036
(CBP_BcsS)
 click to view
Estimated TM-score=0.60;
easy target.		 >Cellulose biosynthesis protein BcsS (Length=144)
IFRASVLPGWRVKRGNVEIKVFAGPALESHALKPDVPTDKLRGSNFGARIATELWWEPTPAMMVAAAASATTIGSGYSAR
AAAGWRLWDRFWIGPEIAASADEYSTQYRIGAHLTGFKTGPVEWSVGAGYLEDSFDRNGIYGRI
2605 PF17034
(zinc_ribbon_16)
 click to view
Estimated TM-score=0.60;
hard target.		 >Zinc-ribbon like family (Length=128)
CNFCRKPIFPFSNRNECNNLPTPIQRGVSKAGPAKHLGKSCPHCGQPLPKCSVCGFSLGDEDVPQKDDFSQKPQNYVKEV
NLQKSRFGLWFSFCLNCGHGAHASHASEWFSTHTICPVPNCDCECKLK
2606 PF16580
(Astro_capsid_p2)
 click to view
Estimated TM-score=0.60;
trivial target.		 >C-terminal tail of astrovirus capsid projection or spike (Length=245)
ADDQYTPHFVYDFQGARVSTAESGVFCLAAIPAATTSSRYNGQITSPSIGYKNASGTGTSFSLETASWWNILDVTQTGVL
FGQPKLGVGVMQTMKTLKQHIKDYTEPAIQKYYPGTTNIDDRLKQRMNLAEGDPVISMGDTNGRRAALFFRTSDEKYILF
FSTTEDPGAEYQNLKMLYFWNWSYSDNKQQFLDHLRTVQFANLDDSQPALCDSDDDGLSDVTSLFEQADLEDETDFKFKM
SIQTS
2607 PF16370
(MetallophosC)
 click to view
Estimated TM-score=0.60;
hard target.		 >C terminal of Calcineurin-like phosphoesterase (Length=148)
EHVHGTVCGAWWTGPICSDGTPSGYGVYEVNGSELQWYYKGTGLQRNEQLRVYAPGRDKANSAAVVANVWNWDPQWKVEW
FEDGVAKGTMKQQVGLDPWAVELFAGPELPQKHKFVEPTKTDHLFYAQPAAGAKEITVKATDRFGNTY
2608 PF16302
(DUF4944)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4944) (Length=131)
GNKVKYEGSGKSGLWMSNLEKSDKTSIGPNYFLNLYWQGSKKEEKWTVVERITLYVDGEKYQDDNVDEYDLSEYTGDEMP
GGGRMEDHISTFDYMPEDEVIGHDVLVKVEWRTGQKKQTEAIKLHKKPWYK
2609 PF16292
(DUF4938)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4938) (Length=302)
PLRIRHLAALYGPNIYRPQPGVVLRVGAAADYSDRLRTALKGGALAIGLVIAQLHVEAKPDNDDMLMSAFFTTPEPAIGA
ELCRYVVDGINAELGHDESWDPDEPLLALRDRRQAQALPVAALQLMANARHRDIPTTILDDGRLLIGQGERGWIVAPADL
RAAPDLQPPWSRLGRILIIAVTGERYRQQAIAEQAARHQGIILDQANRASVITALADPACTALIVGFDTDSLIREGLPFD
RCDLAIITDRAGSRPPTAADDDEWLRALGLPMLCSVAPTLINLTDPALHPLLSYAPNGVIGW
2610 PF16233
(DUF4893)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Domain of unknown function (DUF4893) (Length=171)
WRQIVTAPDRDRLARWRAAWIAGLDKATAAGSAAQVAAQGPLLKPDAALDDPLPPQGDYSCRVIKMGAQTKGLMDYVAYP
YFNCRISMLDGRLHLAKLNGSQRPVGDIFPDEGRRMIFLGAMTLGDEARPLPYGRDGERDMVGVVERVAPQRWRIAFPYP
RWESTIDIFEL
2611 PF16201
(NopRA1)
 click to view
Estimated TM-score=0.60;
easy target.		 >Nucleolar pre-ribosomal-associated protein 1 (Length=198)
LGLAFEALSSNDEEMRRAAGLALVRYKRHMEGRKEFLDRNVWFHFYGGVQNGLGALGKVMDTVCPRLPHVSANFLAKASI
VLTTPLAQLYKPIADYILSKETYNLAVVPNFNFMFLSADVDHHGHREFLLGVIADGVKCEEDFDVLDLSGALETLMVFFS
CPFATIDTNLRILGVINTIARIPKCAAMLMDKYAIVAW
2612 PF16185
(MTABC_N)
 click to view
Estimated TM-score=0.60;
hard target.		 >Mitochondrial ABC-transporter N-terminal five TM region (Length=243)
SYCEANSSISHTWVDEGISPCFYFTLVPAILLTISFFLGTIHCICYQKYGTAMEPKFIPRSRLYGFQLALSVLLVVQFLG
GIVWQATTGGELPGYVVLYGCFSVLAWAWAISLLRVERRRVLVMDRTRGHSTFLLLFWALAFSAENLAFVSWYSPHWWWA
LENNKQQVQFALWLIRYICTGLLFFIGLKAPGLPRRPYMLLINEDERDVENSGQSLLGRTEENQSTWKGFRQKVRLLVPY
MWP
2613 PF16092
(DUF4821)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4821) (Length=251)
ARRAESSDAPEISNLILPSTKDVFGRLNVIYLLEKANLAVTLNSANNEVIAHAAFLDYPNLDLVDQACWEPWLHNNYNID
KCTPLNTLFMHLYVARPDFCIGSSKEIVRTVFNAVTELHYIFLFAPVGSTLEPALAAVFEPVETLQTSNTDYMAFVCHRH
RHCPVLHIRRARVEDHDDLIPIFAQQTDKLGSTYGDYFLAELIEAQDEDNHAAVCESEGTAVGFISLSGDINVKLLNECF
ELGPYHGLHKP
2614 PF16076
(Acyltransf_C)
 click to view
Estimated TM-score=0.60;
hard target.		 >Acyltransferase C-terminus (Length=75)
LVKGHWPKEIHFHIKYHPSSSLPSSDEELGEWLKKRWREKDELLTQFYETNSFPGPVLRETLMSRLKILALLVGW
2615 PF16012
(DUF4780)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Domain of unknown function (DUF4780) (Length=176)
VEERLKVVIAFEGYPKSSIRLRQMESFQRCLNTIIEMQLHNGLLKETPSFVDYYLNRGAIVVVCKDLESRDWIVRVFPGL
EERMKEKIVLLNSTVKRVYLAVMKLPRTCWPMKARDVFKLLQYFNPKLKTVLWKIYSQKVMNGVEVTSFIMDRVSGEIVR
GYSFNNVIDYSQMEFD
2616 PF15941
(FidL_like)
 click to view
Estimated TM-score=0.60;
very hard target.		 >FidL-like putative membrane protein (Length=90)
GYTDSDAGWLYLQRYVKFNYTSKRISPTERQYRISKWESSASSIDQSPDVIFDYFMREMSDSHDGLFLNAQRLNDKALLL
SSINSPLFIC
2617 PF15860
(DUF4728)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4728) (Length=92)
VYLGIILLNLLSSALLVLGTMKERHLMLLPWLINSAVGLVFSIVYHLALFVAAFSSGADFGHVLPALIPTALILALQIYI
YMGIYSLFKQIQ
2618 PF15616
(TerY_C)
 click to view
Estimated TM-score=0.60;
hard target.		 >TerY-C metal binding domain (Length=132)
DVACVTLVGRCQKTRKPYLIKYERELQDVATLDFKFEVPIYRLTGCYPLDEDYFAWSDTRVVDLKVNTSDLIGAPGCPHC
GNATAFAVCGCGKLLCINGPEEATCPWCEKQVTFTPRPASEDDGFDVGRGRG
2619 PF15607
(Ntox44)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Bacterial toxin 44 (Length=106)
FANLVTDNAPFDLKSTSRSNLDKIPSYAAIVIGEWSMLNGRLTRYDDYGNISYGYWGRAYGYTTKTLLRGSNDNQIKKDE
SGQTDGNGDEQRDIDAIKMGIKQYDN
2620 PF15588
(Imm10)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Immunity protein 10 (Length=108)
FRAACIVTKDPEDFCHLVGFADKKHDTEHYLMLQRSFEEDEDEQDEELGMDTYHVEWCGQQRPRYGGIERFVLKRSGAEL
TFKREAEEDMDEPKQMSIAFDLSAGEYE
2621 PF15584
(Imm72)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Immunity protein 72 (Length=81)
PKNESSTGEVNSGEEIPVEGIWEPWFPGDEVGCPNYFLKGSIAHQYLLEGTNDEYDVRWRLLWEDTRYQGGSIPEEESTY
F
2622 PF15505
(DUF4648)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4648) (Length=78)
VVAVTDYHIHGPLELLPHRNDRLQVFCRESEERRFGRLQNGQQGQPLAKTMTRHVGISEPKPLILCGNRAYGKSLISQ
2623 PF15461
(BCD)
 click to view
Estimated TM-score=0.60;
hard target.		 >Beta-carotene 15,15'-dioxygenase (Length=286)
SAVLLGLPHGAVDHLAVARTRGERPDWRAIARVFALYGVVGGAYAAAWFLAPAAAFVLFIAVTWFHWGQGDLYALRALAD
ADHLRSLPQRVGTVLVRGGLPMLVPLLAFPDWYRRVATDLVSLFAPDAVAAIGWAFRTDVRTALAIAYGALVVATLAVGF
TRADARRPWLLDAGETLGLLAYFALVPPVLAIGVYFCLWHSLRHVARLLLVDDDATAALENRDPTAALARFARDAAPLTV
ASLALLGGLYFLVPNPPGSVPEWVALYLVFIAVVTLPHVVVVSIMD
2624 PF15456
(Uds1)
 click to view
Estimated TM-score=0.60;
hard target.		 >Up-regulated During Septation (Length=142)
MHLLTETAMGDSMGYEVLSFEEVEELKKEYSLLSTRVEATKRKLALETKLRDAARSLSRLHSPKSSRTSEDYGSDPSPGS
HRKRRSIFGRNGDDNYDKADEELATSTRKCEDLAQELWRLERRTQDIQRRLLQHTAGILQMT
2625 PF15287
(KRBA1)
 click to view
Estimated TM-score=0.60;
hard target.		 >KRBA1 family repeat (Length=42)
PMNQAGSAQSSPLEALETYLKDIPLNRSIRPQPLSNPWCLSP
2626 PF15209
(IL31)
 click to view
Estimated TM-score=0.60;
easy target.		 >Interleukin 31 (Length=128)
SHMLSILRPDAKDQQKIIKELQYLSKILLEEYREAEKGVPESTKYTLPCSTSDPHPSNNINSSAILPYFQGIKQHINNKS
VVDEITGQLKKLVSQDTSEINVSVPTDPFERKCFILAILQQFAKCVDG
2627 PF15125
(TMEM238)
 click to view
Estimated TM-score=0.60;
hard target.		 >TMEM238 protein family (Length=68)
GSCLPLFVMAIVFDALGVVLLFVGIFGNVRTQGVFYGDFLIHTGALVLFASLALWLMWYVGNIRVKDE
2628 PF15051
(FAM198)
 click to view
Estimated TM-score=0.60;
easy target.		 >FAM198 protein (Length=312)
SSIRIYSTRAPPWFSNEDITAMRFLADSKITQIDEVAHRDFSSLILFKSATNRSDNATKCCGVVKRPVDMSEVFAFHLDR
ILGLNRTLPAVSRRFHSLGEGQPCPVVLWDPSLGPVADQPSEKLNWGSYQTSLKHKCWHRGVTPKPEWGCSSIHHHEWSK
LVVFDFLLQIYERLDKNCCGFKPRPEDTCVELGYHEECRDKDSIELTHIIHRRHDPHHLVFFNNKGYFDRDEDNLDFRLL
EGIKELPDQCVSVLMSQRLREKLLQSLFLDQEYWDSQGGRQGIEKLIDVIERRAKVLLTYINAHGIKVVPMN
2629 PF14687
(DUF4460)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4460) (Length=110)
SRTLSGADAINALRPFYFAVHPDFFGQHPKEREVNENSLKRLNGYLENLQKPGFRSFKPTQLTFYVREREPNSSNVQESF
SASGFRAVSFTLHTRDLLSTVLDILNSCSL
2630 PF14652
(DUF4457)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4457) (Length=319)
LNFTMTWGDPHYLGLTGMEIVGRDGKALPFTLAELSACPHDLSILPEYHNDTRTLDKLIDGVNITNEDSHMWLIPFTSGA
DHTITINFNKSEDIAGIRFWNYNKSPEDTYRGGKIVHLTLDGHTISPPEGFLIRKGPGNCHFDFAQEILFVDYIHEKQIT
DTQLRSHSKCMEFAAMDYEAPLMPCGFIFQLQLITSWGDPYYIGLNGLEMFSEHGEKINLTENNIAAFPESINVLDGVCG
DVRTPDKLIDNVNDTCDGRHMWLSPILPGMVNRIYVVFDQPTTVSMIKMWNYAKTPHRGVKEFGLLVDDLLVYNGILNQ
2631 PF14400
(Transglut_i_TM)
 click to view
Estimated TM-score=0.60;
hard target.		 >Inactive transglutaminase fused to 7 transmembrane helices (Length=160)
FRHQNYGVPWTPGETRQVWDVEARIEFNANGGEVKASLAAPHTQKGYTLIGESASSPGYGVSYVNSDSGRRAEWSIRQAT
GAQTIYYKAQFLVDPQAKVDEQPPTGEIAKPTLSAPQQAAANALIERAMSRSADNETFARELIKTLNDPDSQNAALILND
2632 PF14392
(zf-CCHC_4)
 click to view
Estimated TM-score=0.60;
hard target.		 >Zinc knuckle (Length=49)
LDVRNPLRNSKSVQVPSGEVVSVTFDYERIRKRCFFCQRLTHDKVDCPY
2633 PF14352
(DUF4402)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4402) (Length=121)
GIRETQSLDFGTLVSPAADSTVTVDYNGSRRSSGNIHLHSSKASNGVFQLEGIAGRKVNVTFPSSVDIGGGMVVSDFTAD
TGLSFPLEAERQNMNVGATLNVPADTPEGEYSGQYTVIVSY
2634 PF14319
(Zn_Tnp_IS91)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Transposase zinc-binding domain (Length=91)
FRDGEARFLSEYGHTLSREQRQVLRAVIRCRTAELGGHLQQCDDCGHQRIQYNSCRNRHCPKCQAMARAAWLEKRESELL
PVPYFHVVFTL
2635 PF14291
(DUF4371)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4371) (Length=235)
SFTKHGFTNWKKPERLRVHVGCSNSVHNDAWRSCQDLMKQEQHIQTMYSRHSNQTKSEYRARLQASIDCVRFLLRQGLAF
RGHDESEESSNRGNFLELLKFLADHNEDIKAVTLENAPSFLKVTCPDTQKDIVSACAIETTNAIIREMGDAFFSILVDES
RDVSIKEQMVVVLRYVNISGQVVERFIGIEQVSSTTAQSLKEAIDRLFSRHGLSMSRVRGQGYDGASNMQGEFNG
2636 PF14284
(PcfJ)
 click to view
Estimated TM-score=0.60;
very hard target.		 >PcfJ-like protein (Length=145)
YMDYLHMLEELNTPLNNDSVLYPENLQVAHDNAMNTLNLLKSEIEEKQYQERKNQIKALEAEIDDLLFLTPHSLQEIIQE
GSILRHCVGSQHYIERHTQGKTTIVFIRRKEKPDMPYFTLEYRNQQVIQIQGKCNRQEVPEKIKQ
2637 PF14176
(YxiJ)
 click to view
Estimated TM-score=0.60;
hard target.		 >YxiJ-like protein (Length=110)
FNELQKMHSPLHKPFPNCDIRKIRKDFNNMFTEDDCISADLNYYWMHTAGTLSYVLNNNEQEIVFNQIKWLRKSFFEWFP
QYRFLETEIMKYPILYRDFMNYEKTRKLLL
2638 PF14154
(DUF4306)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4306) (Length=84)
WLQYVIILPILFFSLFITSWTASYLSISEDWKQHIVFTPQTAEDSNQIYEIDKLLYAFKYNPVFTTIFVLSIVYLIGIMI
TRWL
2639 PF14145
(YrhK)
 click to view
Estimated TM-score=0.60;
hard target.		 >YrhK-like protein (Length=61)
EIGRVVTYFLGSVLFLIGSIYFYPEYSVLWDGDAGVFASWCFVVGCIMFFSGANLDFIQTI
2640 PF14118
(YfzA)
 click to view
Estimated TM-score=0.60;
hard target.		 >YfzA-like protein (Length=90)
KERPSRIRNWLKTIGAFFVMQLIYIILDMNSWIPNFKEGGVGDRLVNSEFFTEWFAPYKTKQFNVLTAVMAILLFLNVVT
SAIKDAFSRK
2641 PF14110
(DUF4282)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4282) (Length=85)
DFSFKEFIALQIVKYLYIIGIVIAGVSALGMIGSGFSTMQYSFLGGLFQVLLSPVAFLLMVVLTRLVLEALIATFRIAEN
TTKLV
2642 PF14102
(Caps_synth_CapC)
 click to view
Estimated TM-score=0.60;
hard target.		 >Capsule biosynthesis CapC (Length=121)
LGVAVSMVMYEKRHLTTGSIVVPGYIAVFIIHPLVILATFINAFITYAFVNLFLRRYFLLYGRTKFTILAVTSTTIQFGM
LRITPSGQWLWERDIPLFIGVGYIVPALIAHDMARQGVWKT
2643 PF14067
(LssY_C)
 click to view
Estimated TM-score=0.60;
hard target.		 >LssY C-terminus (Length=191)
IYVPDYFIGRTRTSDGLLGDPVNLAFLGTAEQIQSALAAAGWTRADPVTLRSSWRIITSTLSRRSYDEAPVSPLFLFGRQ
QDFAYQQEVDGNPAQRHHVRFWRCPDGWLLPGGRRVDWLAAGTFDTSVGLSLFTLQVTHRIDADTDVERDHIVKTVTDAE
PRVVVDVIPDFSTGYHARNGGGDSIRTDGDL
2644 PF14027
(Questin_oxidase)
 click to view
Estimated TM-score=0.60;
hard target.		 >Questin oxidase-like (Length=328)
FHNHIVHHILTIYALGATPDEIRAAYDHNKTYQRPVLPTTQSVVESMHDKTQFQQHLGNEKHFPNYLAFFQQEIEKKGVA
DVLNEYLFSGSECAETMLARLFGGLLHPLIHLGFGLEFDQPAIVAEALAQTAVHEDWIGRLYLLPVEKAAGGIGKPGKKT
MLQILNEIRADKKLAGSVKWEDGNKIRDGVLKRAPDEMIKYAAQVSVSAEQMEEKLAELLNLVAYFTGAAQRPPKQVKLD
FFLMHCVTSSIFLSKIVTLPYLDTRTKLRVLEWKGRADLVFYVSRGVPNLLLEEVTTYEAPNDWKTIFHESSVHPRDDGH
LSKLVRAL
2645 PF13976
(gag_pre-integrs)
 click to view
Estimated TM-score=0.60;
hard target.		 >GAG-pre-integrase domain (Length=66)
NLYVFQGSMSRDSVNLVENDTSSELWHRRLSHMSEKGIDSLAKKNLLSGVKQAKLKKCVHCLAGKQ
2646 PF13963
(Transpos_assoc)
 click to view
Estimated TM-score=0.60;
hard target.		 >Transposase-associated domain (Length=79)
RSWMYTGRQSRKKFTPEWLENTTEFVERAFRILPPGRQAVLCPCARCQFRLYRPKDEIQLHLFKNGFAPGYTVWVYHGE
2647 PF13843
(DDE_Tnp_1_7)
 click to view
Estimated TM-score=0.60;
hard target.		 >Transposase IS4 (Length=355)
DIFNRFFTPDLIEVLVTETNRYARGKEAVHWVDTSAEEIRAFLGVTIRMGLKQVPDLYDYWSNSTVLSVDGIKHVFPRKR
YEELLHNLHCADNGSAIPAGQPGHDKIHKIRNVLNILNRNFQDNWTPHQQNSVDEGMIPFKGRIGFKQYMKDKPTKWSIK
VWKLVDSVRAYLLHFKIYTGKTDNPGANLGEKVVLDLCTSLPRGIPWKLYFDNFYTSLSLASSLLEQGIFCTGTTRPNRV
GFPHQLHMARLKTGESKWMMKEPRFFALKWKDTKDVYVLSTMAKPGVEDVRRKEKGHVEGVIKQCPSVVVDYRKYMGGVD
TNDQHLSYYKCSRKSSKWWMPVFMQMLDMAIVNAW
2648 PF13821
(DUF4187)
 click to view
Estimated TM-score=0.60;
easy target.		 >Domain of unknown function (DUF4187) (Length=53)
EDEEEEELEPSEKLEHLTMYLRRTHQYCIWCGTKFDDDRDMADNCPGDTAQDH
2649 PF13814
(Replic_Relax)
 click to view
Estimated TM-score=0.60;
hard target.		 >Replication-relaxation (Length=188)
LRDVWEFRFLNSEQLLSLHVGGVRNIKQRLSLLYQHGYLDRPTVQKTARLASSHIVYSLGRKGAETLAKNAEEREGILRR
IRENEHTLPLIAHSLMISQFRVCLTLALKKQSEIKLTRWAQGNDLKSALSKRGANPPLVPDAFFVLETPTHKYPLFLEAD
RATMTQERFVSKLKMYWRHNREQSFQNT
2650 PF13789
(DUF4181)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4181) (Length=113)
VLVSFNVLMRKLLKVEKKKFFSYNHVNEKHAKIDWTIRITFIAVLVLGYIINMSRDPSDWLWYLEPWYLAFVFIIGSEGA
RAMLEWKYAENRNAYKLTLSQLLFIVILLVTIF
2651 PF13787
(HXXEE)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function with HXXEE motif (Length=117)
WLAFAAYLLHQFEEHGVDLFGQPYAFRTDLCRILSYRDPIACPVPLSFITAVNVGTVWIAGLISGLLVRRMPPIGLSFFA
IPLVNALTHIGSAVVEWRYNPGLLTACVLFVPLNIWT
2652 PF13700
(DUF4158)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4158) (Length=164)
ILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRGDANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVAKQVQA
EPASWAKYGERDVTRREHAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALSVIDRA
CSEA
2653 PF13683
(rve_3)
 click to view
Estimated TM-score=0.60;
easy target.		 >Integrase core domain (Length=61)
DIKLKLIQPGKPTQNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAI
2654 PF13605
(DUF4141)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4141) (Length=53)
RITMIICLCLLFAGRASAQWVVSDPGNLAQGIINASKNIIHTSKTATNMVSNF
2655 PF13565
(HTH_32)
 click to view
Estimated TM-score=0.60;
trivial target.		 >Homeodomain-like domain (Length=68)
VQTIIKKAKRKGAVLPAQRAGRPRATSETMEQVILNVVTSDPTLSARAIQEQLRADYQLEVSFETIRR
2656 PF13551
(HTH_29)
 click to view
Estimated TM-score=0.60;
easy target.		 >Winged helix-turn helix (Length=64)
RARIVLACADGMSNMGAARSLGVAVKTVAKWRRRFAAEGMAGLDDACRIGRPKADLVLDDAERA
2657 PF13272
(Holin_2-3)
 click to view
Estimated TM-score=0.60;
hard target.		 >Putative 2/3 transmembrane domain holin (Length=106)
LTSWLVAAIILVAAIALFSPQQLPVALYKLSLVSLAAVVAYWLDRGLFPYARPDSYLETDWRHGSDGLTPEADYRVAKGY
ELVFAAAMLRRAVIVLGVVVGVALGL
2658 PF13267
(DUF4058)
 click to view
Estimated TM-score=0.60;
easy target.		 >Protein of unknown function (DUF4058) (Length=253)
MPSPFPGMNPYLEHPELWPEVHSRLIVAIADAIFPHLRPKYRVAIEKRVYQMTDGNSVLVGIPDVTIGRYIKATDKEPSN
IAVASPPAKPITVNIPIPEEVRESYLEVREVGTGEVITVIELLSPKNKRPGEGRKAYDTKRQQVFGSSTHLVEIDLLRGG
EPMPILGNQIQSDYRILVSRSELRPRAELYPFNLPEQIPTFVLPLRKGDTEPLLDLQSVIQDLFDRAGFDLAIDYSREPV
PPIGEDDIVWVSE
2659 PF13194
(DUF4010)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF4010) (Length=210)
VFISGIGFLGYVLIKLVGPRRGVGLTGLLGGLASSTAVTLSFTQRSRHAPGLARPFAVAILLAWTIMFFRVIVEVAVVHA
ALLSRLWLPMTAGAGAALAYTIYLYLTASSRQQEEEDNLKNPFELGPAITFGLLYAVILLVANAAQMYLGDTGVYLSSLV
SGVADVDAITLSMAELTRQGNLTEDVATRAIVLAVIANTLVKGGLVLSTG
2660 PF13129
(DUF3953)
 click to view
Estimated TM-score=0.60;
easy target.		 >Protein of unknown function (DUF3953) (Length=41)
MILFLGLMMLVMGLEEFQKERKAYGWLFVVVCVFSLFVSIQ
2661 PF13047
(DUF3907)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3907) (Length=147)
KQVEAFLQQTVETISDYLNNTTITSLLNEQADGDKAYYELLLSDLRRLVVYCEEGLEACRVVLHDEPFRKAAAEKTLYRI
YHSCIEEFFAPKNEGWYEDSRSAYTGRNSIKFRQTPPPSLKNLIASLESGFQTIREELEFYETDYRT
2662 PF12957
(DUF3846)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Domain of unknown function (DUF3846) (Length=95)
VLLVEPEKYPKEIEIDDSLEAMQEVVGGDIEEYMPFDDDVAIICNEEGKVRGLPLNRAVYVQDNDKKEMVDIICGKFFIC
YAPPESESFQSLPDD
2663 PF12791
(RsgI_N)
 click to view
Estimated TM-score=0.60;
easy target.		 >Anti-sigma factor N-terminus (Length=53)
EIHKNKAVVLTPDCEFLVIKRRRDMYLGQQVKFNIKDVRKNVRPMNRYASIAA
2664 PF12615
(TraD_N)
 click to view
Estimated TM-score=0.60;
hard target.		 >F sex factor protein N terminal (Length=98)
YCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMRDLIRSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWS
AFVLATVVALVICLITFF
2665 PF12547
(ATXN-1_C)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Capicua transcriptional repressor modulator (Length=57)
GICAGKPVTRTPSNSLSSTSLPFPPPPLSVESLKAAVTTLSPHTVIQTTHNATEPLS
2666 PF12528
(T2SSppdC)
 click to view
Estimated TM-score=0.60;
easy target.		 >Type II secretion prepilin peptidase dependent protein C (Length=86)
YHQILQQSFQHQWQQRQAWRFAMQQLEAYEAGVSYHSFNLDDATSPSGKNWQFSLLEQQQSGECRQVTARVMTPRRYQAT
LNRWFC
2667 PF12473
(DUF3694)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Kinesin protein (Length=146)
YIPAVVDHRGGMPCHGTYLLHQGIQRRITVAIAHENGNDIEWKEVKELVIGRIRNTPEADETIIDPNILSLNILSSGYFW
PKHDDKTFYRFEAAWDSSMHNSLLLNRVTPYGEKIYITLSAYLEMENCTQPTVITKDFCMVFYSRD
2668 PF12358
(DUF3644)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3644) (Length=78)
IVTAIISWTYLMHAYYKKKGIDYRYYRMGGKRKRYDKTKNGAYKYWELERCINQINCPLDKPTASNLKFLIGIRHEIE
2669 PF12268
(DUF3612)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3612) (Length=175)
TVVSPYPHWHYFDAYAPGKLKAVYRGNGIPLPWGNMRQVQDPCQHWAVFRMINEPTEGTSAQISILNVENEPRIYCCESI
KVEDLAGNNHVLCAGIDLNPAIEAQGGDALSIASELKQACVAHGGSASIPKVIKKELMSVAKILNINWVERGIETEARVI
CSRGAVCPRDPSCYQ
2670 PF12246
(MKT1_C)
 click to view
Estimated TM-score=0.60;
hard target.		 >Temperature dependent protein affecting M2 dsRNA replication (Length=237)
RFLQLRGYVDSKHQLTTWGKALESALSSLQPSDNLEEPTFLAVELIRLGILSAKDWFPNTSGGPMRGSDEEQRNNLLISR
VACFGKIQHKPIGYSGPLSRQLLSFRSLVSTVRTALRDLMEVVLASLLLSGDANRERDDWTDLSLSLPFIDDNDCGLAIA
VRTYLDDLPQEPEPTTDAIREEVKAKGKEWFQHSHSFSENLEVSFHLWDAVYKAVQVANKESGVDAKVWNEANQWLS
2671 PF12098
(DUF3574)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3574) (Length=97)
QQDLYFGRNIAGGGEVSEADFQAFIDAEITPRFPDGLTVYDANGQFLDSTNSLIQEPSQVVTLIFENTLENQAEVDQIIE
AYKQQFQQESVLEVVNA
2672 PF12021
(DUF3509)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3509) (Length=84)
FDQISAAFAPEYRVNLSIERLDGSIMLTLSDDSGVVARRLVSAAQRNDPVRLQRVIDSIRLGLAIELGQNPLQVLAALTR
DHRH
2673 PF11984
(DUF3485)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3485) (Length=203)
ALILLASTLVAVQVIDFREKTPPAKPFAQFPVHVGQWQGVRGHLDQDIIDRLDLSDYTTIDYRGPDGKTVSLYVAYYQSQ
TKGESIHSPETCLPGSGWKFEKSGVSNLPVVAGRRNSLPVNSAVMSKGENRQLVYYWFPQRDRIVTSTYALKFYNFWDAL
TRQRTDGALVRLITPVYPDERIEDARVRLTAFAGDMMPVLSEY
2674 PF11906
(DUF3426)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3426) (Length=152)
ACVLGLLLLALQVVYVYRSAIATAAPPLRPLLTSLCQPLGCQIGYARRIERIFITSSSLQPPRGQAGAPADGHSHLVLSV
SLRNRYDQPQHWPALRLDLTDLSDTVVVRKVLQPRDYLPPGQAEGPFEPGAEINVTVPIEVAGVQVNGFQLD
2675 PF11875
(DUF3395)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF3395) (Length=143)
PRERKNRRRVIARRQKELKKLVPIKRAESLQATELMTEQVRRRQAKEERQDGLVITKAEYGHYPSKKKGNDVGKEYEVVD
VTIPVAGLVDRSQLVIPKNMVKFHILGFYDPAPLLPKTLKIWYTYHGAQHYVEATDSEAIACP
2676 PF11839
(Alanine_zipper)
 click to view
Estimated TM-score=0.60;
easy target.		 >Alanine-zipper, major outer membrane lipoprotein (Length=63)
AEEADQKATEASSKAEEASSKAEEASSKAEEASSKAEEASSKAEEADQKATEASSKAEEASSK
2677 PF11827
(DUF3347)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3347) (Length=170)
QLRGKHSMMNPPPKKRHTHTPPKRIKLPKQALKRLKPLYTAYFTLQRALADDKPKRAHKAYKQLGAFLRRPLTLHARTQK
TWQKLRVGLYDAFKKGNTHTTLAPQRAAFEDISKQVIQLEQRFGHAGKKEHFLAYCPMAFNNRGAYWLQDQKDLLNPYFG
HSMLRCGEIK
2678 PF11755
(DUF3311)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3311) (Length=59)
CLVAPFVAMLWVGSYAKTDPTFIGIPFFYWYQMLWVLISTVLTMIAYKLWQRDQRGRKG
2679 PF11672
(DUF3268)
 click to view
Estimated TM-score=0.60;
very hard target.		 >zinc-finger-containing domain (Length=119)
SIRCPYCGGTAILRDASFVYGEKSYGGKVYVCSNYPKCDAYVGVHPGTRIPKGTLADQELRKKRMLAHQIFDQIWLRGIL
SRPDAYHWLADKFCLSDEQAHIGMFGNYMCDQVIRESKK
2680 PF11457
(DUF3021)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3021) (Length=141)
RRGMSGFPLGVFIGYTITIILSLFWGEGYYWAVVPALVEQCGNEINAVILQFILSGVLGSVCAASSVIWENDNWSILKQT
VIHFVIISFTMLPIAYFAHWMDHTFIAIVKYFCIFIAIYIAIWAVEYSVWKHKINQINDKI
2681 PF11372
(DUF3173)
 click to view
Estimated TM-score=0.60;
hard target.		 >Domain of unknown function (DUF3173) (Length=56)
TMVKGDLMALGYGNGESVTYIAKAKRLMVEKGYSYYKNPRLARVPVYVLEELFGYD
2682 PF11361
(DUF3159)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3159) (Length=185)
LGGFSGLIYSTLPVLVFVPVNTFAGLTAAIWSALGVAAAILVWRLVRRSPIQPAISGFLGVGICALIAYRMGEAKGFFLF
GIYTSLVYAGVFLVSMLVRWPLVGVIWGVLNGHGTEWRSDRRVVRLYDLATTTWVIVFGARYLVQSQLYDTDRTGWLAFA
RIAMGWPLTAVALAVTVWAVRRAGH
2683 PF11338
(DUF3140)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3140) (Length=91)
DFDEAVNMTASELKKWLETDESKSVGQKKDGGESTGHESGRHIVRILEKKKADLTDDDYAHMRKVVGYVKRHSAQKPKGD
ITDTDWRYSLM
2684 PF11276
(DUF3078)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF3078) (Length=91)
LTQASFTNWAAGGENSVAVNGLLSTFANYKKGRSSWDNTLNLAYGMLKQGEDGVRKTDDRIDFMSKYGYKATERWYYAAL
VNFKTQFADGY
2685 PF11227
(DUF3025)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Protein of unknown function (DUF3025) (Length=210)
LSFIAQDDLPPGTAYEAHIAATGCVPTRHNLHDFFNALMWFAFPRIKAALNARQSAAIDALGVGPTRGGLRDALTLFDEN
AVLFACADPRLSAALRGFEWHTLFVAGRAAWGERCEVRPFGHALLEKLIAPYRACTAHAWIVDVPADYFGWSADARDAWL
DRAVADRLAGDDDLTPRRFAPLPVLGIPGWWTENEAASFYDDATVFRRGR
2686 PF11202
(PRTase_1)
 click to view
Estimated TM-score=0.60;
hard target.		 >Phosphoribosyl transferase (PRTase) (Length=251)
SSYAPEDVGWLLQDLSDTRLEAPTEEREEAIQSGGAHYAESLPVEYQPSAEYQALFTAALDASAARIARAVGTVTETVLA
ERGPRPVLVSLARAGTPVGVLMRHWARHRHGLDLPHYAISIVRGRGIDATALRWLAAHHDPADVVFVDGWTGKGAITREL
AAAISAFEESSGISGFDPEIAVLADPGGCVRTYGTREDFLIPSACLNSTVSGLISRTVLRADLVGPDDFHGAKFYRELAE
SDVSGDFLAAV
2687 PF11141
(DUF2914)
 click to view
Estimated TM-score=0.60;
easy target.		 >Protein of unknown function (DUF2914) (Length=60)
TITHQWQHDLKVVKSEKFLLDSSRQRFTSTLGAEDFSRGMWQINVLDQKGELLGTHRFDI
2688 PF11132
(SplA)
 click to view
Estimated TM-score=0.60;
hard target.		 >Transcriptional regulator protein (SplA) (Length=73)
KQQVKAGDQVYVIYRNPHAANVAHIKEAEVVEHPLHEGELALFLFDTYHAFAEDDAVFSSYEEAERLYRELFD
2689 PF11005
(DUF2844)
 click to view
Estimated TM-score=0.60;
very hard target.		 >Protein of unknown function (DUF2844) (Length=142)
AHAELGGAPMSPPADDQAASVRALQRAMRSADGVQASAAAYTVREITLGSGTVIHEYTSAAGTVFGLAWQGPTMPDLASL
LGSYFPQYTAGVQAAHKARGWRAPVSVDTSGLVIRTGGHMGAFSGQAWLPAALPAGVAGTDI
2690 PF11001
(DUF2841)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2841) (Length=133)
EIGNEEKIEAYYESAFRAFQQINCRQVAKAYIKIIEPRKQVKHPYNGGRGAPGEKGDPEKTKPDWWPTGVIHREPDHLKK
PERIRLLVHIFRKLGKTHGITADKLEEAGRDAQRQIKPRERLDILDEIYKVRR
2691 PF10994
(DUF2817)
 click to view
Estimated TM-score=0.60;
easy target.		 >Protein of unknown function (DUF2817) (Length=353)
FTETYYQARALFRERARGAHATLHTLRLDHLQDLDLTIDVAVMEGSKKNVVVHVSGTHGAEGFAGSAIQSAALQRYSTWM
THSDADPTVIFVHALNPYGFAQFRRNNEHNVDLNRNWLSDDEIQALTKRDANAFGYLDVYDLLNPSVTDVESWACPLMLR
QIWHFATKGWSSFKRAVVTGNYHFPASLFFGGFKKQPSIVLLEEFLQRNIDFQSLERFAVVDVHTGLGKSGEETLFLTGK
GSSEVMSRVFAHEIKENVANSXANSTNAVTSGYDAVAGVVCDGIAQLVPVNRRXHVVSVAQEFGTVPPPFVLKAMVEENA
MYHQAPTRRLPYAERARDVFYVHRSVSWKQSVL
2692 PF10921
(DUF2710)
 click to view
Estimated TM-score=0.60;
easy target.		 >Protein of unknown function (DUF2710) (Length=104)
SGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELA
DRVNLAITALRDEVEAENRARYGG
2693 PF10905
(DUF2695)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2695) (Length=53)
LLDYVDERLGEQPCDHTARHAQRWAQSHRIEWETLAEGLQEFGGYCDCEILMN
2694 PF10823
(DUF2568)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2568) (Length=90)
LRFLLELCGLIVFGYWGFQTGDNMMMKFLLGLGVPILFAVVWGTFLAPKSTRRLREPWRSLIELIIFALACWALYSTGAV
NLSVAFGGIY
2695 PF10821
(DUF2567)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2567) (Length=166)
LTVTGALIGALWAWLAPPIHGVVALTKKGERVKAFLGNESDHFFVSAFLIAGMLGVLAVVAAMLLWQWRAHRGPVMVAAL
AIGAAAGAGSAAAVGALLVHWRYGAIDIAGAPVSPEHRVHYVIEAPAVFFGHSPLQVAATILLPAATAALVYALMAVSTQ
RDDLGA
2696 PF10801
(DUF2537)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2537) (Length=79)
TPWGTGLTVAAFVAAVVGVAIVVLSRGLISIHPLLAVGLNLVAVGGLAPTVWGWRRKPVLRWFVLGSAVGVAVGWIVAL
2697 PF10799
(YliH)
 click to view
Estimated TM-score=0.60;
hard target.		 >Biofilm formation protein (YliH/bssR) (Length=126)
MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRDNFFELNRELHDQALRQGLHLDQEEWNALRRAEGALA
AAAVCLMSGHHDCPTFIAVNADKLENCLTTLTLSIQSLKAHSPLTQ
2698 PF10755
(DUF2585)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2585) (Length=163)
LYAMGRIPICECGYVKLFEPGVNTSGNSQHLADWYTPSHIIHGFLFYGLAWLLFRKKPLSMRLSFAVLIEAAWEILENSP
LIIDRYRTATMALGYTGDSILNSAMDTVFMALGFLFAARVPVWLTVVIAIFFEIFTGWLIRDNLTLNVVMLVWPVEAIKQ
WQN
2699 PF10752
(DUF2533)
 click to view
Estimated TM-score=0.60;
hard target.		 >Protein of unknown function (DUF2533) (Length=83)
SEVHQAITAHSNKQHALVKQFLQLDAKRERYIEEAVHHCQNGQPFTVENINEVTKQINELARQGIVPQRKYVTVDMVKEY
VER
2700 PF10568
(Tom37)
 click to view
Estimated TM-score=0.60;
easy target.		 >Outer mitochondrial membrane transport complex protein (Length=125)
CLAAIAYLTQAVPKDHWVLVASSDPSLSPTRELPVLKDGPTCISGFRNIIDYLRQCNGEWYLDRKLDAQQKADCTAFTSF
IESNGQPLVDLSLYVSTENYTGVTRSAYSSILPWPTQYITPPRRR

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