Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

This page contains 3D structural models for spike proteins from different lineages. The structure models are generated by the D-I-TASSER D-I-TASSER pipeline, which utilizes deep convolutional neural-network based distance-maps/contact-maps/hydrogen-bonds predictions to guide the I-TASSER fragment assembly simulations. Benchmark and blind CASP tests showed that D-I-TASSER generates models with a higher accuracy than I-TASSER/C-I-TASSER does, especially for the protein targets lacking homologous templates. For multi-domain targets, the D-I-TASSER structure of individual domains are assembled by DEMO into full length structure.

Updates:

References:

Table I: Complex structures reconstructed from D-I-TASSER models

Bulk download options:

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218