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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 45)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4401 PF13109
(AsmA_1)
 click to view
Estimated TM-score=0.52;
hard target.		 >AsmA-like C-terminal region (Length=214)
DRVKIDGNYKNAMIMADLVHGALYLKAHNFSGDYINTILQKDFVEGGLFTLIGALEDQVFNGELKFQNTSLKNFALMQNM
INLINTIPSLIVFRNPHLGANGYQIKNGSVVFGITKEYLGLEKIDLVGKTLDIAGNGIIELDKNKLDLNLEVSTIKALSN
VLNKIPIVGYLILGKGGKITTNVNVKGTLDKPKTQVTLASDIIQAPFKILRRIF
4402 PF13073
(DUF3937)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3937) (Length=72)
MFTNKKLIRFGLSLFVFLGIINFTISYFQTYLETAADIKWVIPEIWKTILLDVPQGILVLLGAIALYDFTKE
4403 PF13066
(DUF3929)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3929) (Length=64)
MVYHLEDGKTIQDIKEFYYRDHNKMLERVKHHVTDNQNVTAIDPQGTLISIACDDIVKVELNYL
4404 PF13065
(DUF3928)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3928) (Length=95)
MYTLKIVSDREAVYQFASYVKVVQGVENVYVEVGEPLYEHPLMKFYVHIAIQATYDNEKALKEIARLVELGRFTYVHYRN
EEIEQAFEAVKYESF
4405 PF13007
(LZ_Tnp_IS66)
 click to view
Estimated TM-score=0.52;
hard target.		 >Transposase C of IS166 homeodomain (Length=72)
KLKAQLAVLRRARFGASSEKIERSIAQLELALEDIEAAEAEIEVSARGVSGSREKAKPSRQPLPDHLPRQEV
4406 PF12991
(DUF3875)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function, B. Theta Gene description (DUF3875) (Length=52)
ILKASTLESKFPIMAVEHDCIVSKDADITVAFRVTLPEVFSVSSAEYEAMHA
4407 PF12982
(DUF3866)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3866) (Length=318)
RAYNYPKLTGEVNIGDEVVLNTTAVELSLGTGGYHFVISNLNNMESNFTPGGHIMKLRYTPLQVKVDAVEEQESPYHDAI
EEFESLENMPVVVGTLHSMLTPFVASYKRNNPSKKLVYIMTDGASLPIYLSKNVDTLKNKKLIDSTITIGNAFGGDYECI
NIYTALITAKEILKADVVFVSMGPGIAGTGTKYGFTGIEQGPILDAVKKLKGMPVAIPRVSFADQRDRHMGISHHSLTVL
NDIVNVEVNIPITTYEDEKLDVVKRQIETKELDKKHHIVYINNKNTEEDLNYFGLSVRSMGRNYQQDKEFFDAASSAA
4408 PF12757
(Eisosome1)
 click to view
Estimated TM-score=0.52;
hard target.		 >Eisosome protein 1 (Length=124)
RNALMAAAQRNVKARLQGMDEKVYNETGKVNPTLMSEWEVKAHQLANASHETRNENKGKIDIGGGKFMDPHEVDAIAARR
MQPLLDDINEKAEIERERLATLKMEEEARKAEQEKQKAREREIK
4409 PF12621
(PHM7_ext)
 click to view
Estimated TM-score=0.52;
hard target.		 >Extracellular tail, of 10TM putative phosphate transporter (Length=98)
FLKPHIYADYATLRRLVPHDVAGSVSNYSPEVERDAYLPPSVKSETPLLWIPRDEMGISKQEIAHTAKVIPITDEGAALD
EKGAVYWVAEKEEGARPP
4410 PF12587
(DUF3761)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3761) (Length=86)
FVLFAVALLCNTAVARQHTQPSSQDSELIEQGDYTNSDGQEIHRPAHTKSGKAPDGASAQCRDGTYSFSTHRRGTCSGHG
GVAAWL
4411 PF12576
(DUF3754)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3754) (Length=132)
FEELILLYTKDASEKDEKSKDETRSSLQLEIFERIPIPDLPVIFPHKKLYFRVIDTVRLDIASILGLTAYFVNYKFENIS
SSPSALFLDVIAVTALVIYATRVVLGYKQTWDRYQLLVNKTLYEKTLASGFG
4412 PF12517
(DUF3720)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF3720) (Length=97)
KAVEAAEGKQELSGPDPPQDKSKVSSPDNKLGNNTQSTGAPGAGGGGVGGQPAELPPKPGGSGTEEQVGELEVMDTSGEE
VAGDKKDHEDGTATGPQ
4413 PF12497
(ERbeta_N)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Estrogen receptor beta (Length=114)
SPASYNCSQSVLPLEHGPIYIPSSYVDNRHEYSTMTFYSPAVMNYSIPGGASNLEGGTGRQTTSPNMLWPAPGHLSPLAI
HCQSSLLYAEPQKSPWCEARSLEHTLPINRETLK
4414 PF12491
(ApoB100_C)
 click to view
Estimated TM-score=0.52;
hard target.		 >Apolipoprotein B100 C terminal (Length=57)
QFRYKLQDFSDQLSDYYEKFITESKRLIDLSTQTYHMFLRYITELLKELQSATVNNM
4415 PF12466
(GDH_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Glutamate dehydrogenase N terminal (Length=95)
MVSKKSLSTSVKGPAKDPAKQSLVGDVEPRCMVNLESVFAVLREQCPVSMQSDVQRLGAAFYCRMETDEFARRTPEQWAA
LVMGMLEFARVRSSG
4416 PF12430
(ABA_GPCR)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Abscisic acid G-protein coupled receptor (Length=179)
RSKTVLGRLLNVFSYGFSMYCLYRIGATTLTTFRRLHAPDTSFSNSDPINNVLALLAKHWDPALDRAAWSRQISFLLAGV
MLLASFNSVLQTFLLFTRLAPSLLQHAQSNIALIVSQISATYVISSALLLRSNLPPEYRGVISEALGAPLEPGFVERWFE
GWFLAACVVSGLGIWLGRK
4417 PF12355
(Dscam_C)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Down syndrome cell adhesion molecule C terminal (Length=118)
SGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDHYGSRGSMGRRSIGSARNPGNGSPEPPPPPPRNHDMSNSSFNDSKES
NEISEAECDRDHGPRGNYGAVKRSPQPKDQRTTEEMRK
4418 PF12335
(SBF2)
 click to view
Estimated TM-score=0.52;
hard target.		 >Myotubularin protein (Length=234)
SIVNDPRHSVSNSARRLEVLRNCINCIFENKIADARKTFPAVLRALKSRAARLALCTELARHVQGNNAMLEHQQFDLVVR
LMNCALQDGSSMDEYGVAAALLPLSTAFCRKLCTGVIQFAYTCIQEHAVWQNQQFWEAAYYQDVQRDIKALYLEPHNNPA
HTPQSPRDGGREFVWRESRGRGNAHSRSQEPTALEIAAEQMRKWPSIDADKQKELTNSEESTLYSQAIHYANRM
4419 PF12321
(DUF3634)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3634) (Length=100)
LYVILIAAIVIFWLIAVDRPVLKVSFDDGHLSKVKGHIPPSFKHNLQDIGEHDPFTGELKVYNQRSGMRLVFSKDVPKKV
QQRIRNVFPHQGFKANKGKK
4420 PF12267
(DUF3614)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF3614) (Length=161)
NFTARFPISAVRYENHYAATMTDDGIGWVPKGHVPDVEIVKRRRSRNRRLPLSHRVAEQSVPALPSSSVEVTSASSDRSS
SSEKASTPSCDSVRSSDWVNVGYSRQNTTKVRESRFTGRGKIGNFTFPRGTVYNAPVDERAYKRVLKLRDTTACSFLRIL
L
4421 PF12168
(DNA_pol3_tau_4)
 click to view
Estimated TM-score=0.52;
very hard target.		 >DNA polymerase III subunits tau domain IV DnaB-binding (Length=77)
LQQNTTQNGGTKKPKAASAKPESVIDRVAQLHGNSAQVSPNSTSKPTEPEVEEAYRWRPSKPVETKVNTKLTPTQLK
4422 PF12015
(DUF3507)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of unknown function (DUF3507) (Length=178)
KSVVETTPLNGHSLFDDDKSLSDWTDNVFTQSVFYHGSDDLIWGKFFVCVYKSPNSNKLNAIIFDKLGTSCFESVDISSN
SQYYPAIENLSPSDQESNVKKCIAVILLQRYPLLSPSDLSQILSNKSENCDYDPPYAGDLASSCQLITAVPPEDLGKRFF
TSGLLQNRFVSSTLLDVI
4423 PF11950
(DUF3467)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3467) (Length=83)
PEQPAPDANPALRARVPDHVAGGCFSTGAIVMTGPSEFIIDFLQTIGRPHRVATRVVIPHPVMPQFVDALQKNLDIYRSR
FGD
4424 PF11872
(DUF3392)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3392) (Length=104)
LIEFLADSGQFIRPWLSEISTAMIACLLVVFGADINRLLRRQLSGTNFVIRTLVFILVNAFGYGFLIITVSPWLANQLSH
IPSQWLICLVAATFIFIGTWAQRN
4425 PF11862
(DUF3382)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF3382) (Length=99)
NLLNALISALVLLVLASFIMGLQLSLEGTRLVVHGADVVRWYWIAAGCAVVFVFQLFRPLLQKGLKKVSGPSFVLPSFDG
STPKQKWLALLLIIAAVAW
4426 PF11780
(DUF3318)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF3318) (Length=141)
RRLLDLMPASGRMLTKIVSKPEQAKVIDATFPLPWNSERPIYINFDLWRRLTKPQRDLLLLRTVNWLTGVKWFKPDIYQG
VALAGLLGGFVESAQADAVGVVVAGGLTTLAMLRIWRTNRSQQTELNADEAAIRVAQRRGY
4427 PF11727
(ISG65-75)
 click to view
Estimated TM-score=0.52;
easy target.		 >Invariant surface glycoprotein (Length=280)
HILLVFSAVASASEESYKIDRYKADRKLDKEGAIALCKLRDVLTNISEETTDYLVEEVQKMGESLKMDMDAINYYVKRVR
SLKESGREDAKINESDSNEIDSLCKEAKAHANKKSRDQVDQTVAKIRRVSGIVKDAATKTLGDENELEDHDNADGIFKVF
NWHCGGDRIGEVHAGSQSCDVIGFRKNFSAGQRNVISCKKWKDEYGETIPHENVTVTQMESYLSRWFEARPKRVGEDICK
DGEYHSPHSCTVWEGWVTGYEETMEKMEELRNNIKKLNRI
4428 PF11594
(Med28)
 click to view
Estimated TM-score=0.52;
hard target.		 >Mediator complex subunit 28 (Length=134)
RVRSYLEQLSKSFVLLDVIREKKVWVIEKTNELSTSVYDFKTTLENEAEQYKLAPEQMLMKHIQSSSESLATQLKTLREK
GQNVFGDGTRIDSTIDYLEKLKTNLSEAENVYKVRDEVLNEARQRIAELTTWTT
4429 PF11189
(DUF2973)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF2973) (Length=68)
MLHLLYILAFTILAFIAVGNLIRNLIMFSFERERSYPTNYSSKNQFIPHPELLDNAGNLIKEPLLVMR
4430 PF11140
(DUF2913)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF2913) (Length=211)
NYHLEIQNVVNTALAELEAEHKAGKLANAPVANNHFLVHWVTKALKAQRFHRCVGDDLTQWQKAGRSKGTESQLLPTFQR
ISAYYAHFFAEQEHTPITDKQIEAFLDEMEQAGWEVSTSEPLVNAGKVQIFTDGQNSLALCSVQCEACFDGEQLVKPMNW
FVRGHHAGFIEKAFAAGFMVHKQTDYKSNVKYHGEYLIFPANQGTQLAEIP
4431 PF10971
(DUF2773)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF2773) (Length=81)
ALNNRHTPPAVLAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNPELDLVRQLALNGKTRAIREQAMRKLDEL
Y
4432 PF10970
(GerPE)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Spore germination protein GerPE (Length=125)
TSQVKFSKVNSVGISSVVQIGDTQELCPKVKVLAVQRTVSLFYGNEAENLDAKEFEVYYEPIPLMLPERSVRTAFYHEKP
VIKVSSIHVEGVSSSSVFQIGSTCGMNGVARVKHIRELFSNDESP
4433 PF10969
(DUF2771)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF2771) (Length=159)
ILALIIAVVIVVVATVLVQNWWNNRPGPEPEEVTVTASVGDESIEVSPYLVCEPGVECPEGEVPNLPVGPDETLKLELPE
PIHNHDWQLLMIYDDPAANNQQLHGPHDTTEVEIPGSVDPVGDSTERPRLVVVEVSSVMIGHDDEGVETPYTTIWSLST
4434 PF10961
(SelK_SelG)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Selenoprotein SelK_SelG (Length=89)
YISNDGQVLESRSPWRLSVIPEMIWGLINFIVLFFQTLINPSKNSKGDRYTSEYRRPGGGGPGGGGPRRRMGGVGGRGGA
PGPPPMAGG
4435 PF10959
(DUF2761)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF2761) (Length=94)
PKQPGYVCPMTGRVAVLVKDYADSDLNGDAPAYWFNPEAEGWGMDPWKLVEGVDPHAQGSSMDVCFADGSSKTVGPLMTF
FLTKTDAARLAAVR
4436 PF10944
(DUF2630)
 click to view
Estimated TM-score=0.52;
easy target.		 >Protein of unknown function (DUF2630) (Length=80)
TDNNIFTKIDALVAEEHELRSKHAAGEISDGEEHDRLKALEVELDQCWDLLRQRRAKREFGENPDTAEARPASTVEGYLN
4437 PF10899
(AbiGi)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Putative abortive phage resistance protein AbiGi, antitoxin (Length=189)
QTFVPRYCFEEIKLSDELERPGFESAIPMVCFCDISLSQMANHIKMYGGYGLGMTKEWGIRKKLNPIIYVNPNSNISESV
SQMAENIYQALDKHCSEITGNIFDEYMNLLNFLKPYDGDFKRGNKTHKKVRFYNEREWRYVPKIEFDSEVKNNLTKEEFL
NPTILENENKKLFEYRLGFKPSDIKYIFV
4438 PF10870
(DUF2729)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF2729) (Length=57)
KLLTYCKLKLVKGFSKKFASLFCRCVVSHLSDEDDSDGDRYYQYNNNCNFIYINIVK
4439 PF10849
(DUF2654)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF2654) (Length=70)
AERKANKLLSKNKRELNRLYKHAQIAAENNNFAQYEYAIKKSRDILKQPYNDELISILWKTTRSQIEDMI
4440 PF10810
(DUF2545)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF2545) (Length=80)
MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLIIRFMVGYGRR
4441 PF10753
(Toxin_GhoT_OrtT)
 click to view
Estimated TM-score=0.52;
hard target.		 >Toxin GhoT_OrtT (Length=54)
YQHMLVFYAVMAGIAFLITWFLSHDKKRIRLLSAFLVGATWPMSFPVALLFSLF
4442 PF10746
(Phage_holin_2_2)
 click to view
Estimated TM-score=0.52;
hard target.		 >Phage holin T7 family, holin superfamily II (Length=56)
SELVSGGMKLAPSALVSGGYFLGISWDNWVLIATFIYTVLQIGDWFYSKYSLWKEK
4443 PF10734
(DUF2523)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF2523) (Length=80)
IAEWLAKISWPLVSRVLVSLGFGYTTYEGADTAITNAISSIQGAFAGLGAEVLQLLAMAGFFDAMSITSGGIVSGLAWMV
4444 PF10705
(Ycf15)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Chloroplast protein precursor Ycf15 putative (Length=86)
ETLVSSIFWTLAPWKNMLLLKHGRIEILDQNTMYGWYELPKQEFLNSKQPVQIFTTKKYWILFRIGPERRRKAGMPIGVY
YIEFTR
4445 PF10561
(UPF0565)
 click to view
Estimated TM-score=0.52;
hard target.		 >Uncharacterised protein family UPF0565 (Length=305)
RINGVKGHQNRTNSIIYCPPLLRTNPQKDKCSAIIYFGGDVQDIPEKMESNRDNKNYIKWNLENTALLLRESFPQSHIIV
VRPMRMEYSTFSCFDNFVRGNNAGIPDHTPMHFSLQHLEELLINLTKKLTKPILDQEFLHKLLAASSSKTLAGDVSCKQN
NVDILQSDIYNSTSGDSNEGDLTDLLWWRENLNLDKASLKLIGFSKGCVVLNQFIYEFHYYKTLTPDDSTMMRLVSRITD
MYWLDGGHGGGKNTWITSRSLLETLCRLCINVHVHVTPYQIQDDHRPWIRKEEKAFTDLLKRLGA
4446 PF10554
(Phage_ASH)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Ash protein family (Length=112)
YASRAFAKSKAECGNSKEHQANNSTPLTRAFFVRSSRTPKECQNKACSSMVACSGQGFALDCLPDVAVFHPVTRYRPTLW
KMLAIAPKNQHQELSKMKAFAYSFLCAIRTPE
4447 PF10490
(CENP-F_C_Rb_bdg)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Rb-binding domain of kinetochore protein Cenp-F/LEK1 (Length=45)
RAEQDDEEFRPEGLPDLVQKGFADIPLGEASPYIIRRTTGRRCSP
4448 PF10367
(Vps39_2)
 click to view
Estimated TM-score=0.52;
hard target.		 >Vacuolar sorting protein 39 domain 2 (Length=100)
LDLLSRRWDRINGAQALRLLPRETKLQNLLPFLGPLLKKSSEAYRNFSVIKSLRQSENLQMKDELYNQRKAVVKISSDSM
CSLCNKKLGTSVFAVYPNGT
4449 PF10347
(Fmp27_GFWDK)
 click to view
Estimated TM-score=0.52;
very hard target.		 >RNA pol II promoter Fmp27 protein domain (Length=161)
DYPLPLIHIPGLKPGQPARQSAMSLRTNFVIAEEYRGKKSTRHIKVNIIPPRTLESDASQEGGFAIDVRRTIGPIKSFSD
MRIDINTALPTRITWGGPCYQPAIQDMMMVIESFTKPQVDPSERVGFWDKIRLNFHSRIHIAWRGDGDLHLALKGTRDPY
C
4450 PF10261
(Scs3p)
 click to view
Estimated TM-score=0.52;
hard target.		 >Inositol phospholipid synthesis and fat-storage-inducing TM (Length=245)
PSYFARKDNLVNVLFVKRGWAWVSAAFAAFVLTHPHHTKNTTTGRGGGQQGGSSSRRLRAVLRWALVTGWWVLVTQWCFG
PPLIDRGFRYTGGKCEEAEQKVRGADNYAASPVDIFSAAACRTAGGRWRGGHDISGHVFLLVLGSFFLLQEAGWVAVRAW
EGASGGGGRRDSRAVVMPDGAVKGVDVEADGRREDPSELGFGGRFVAGVVGLSMWMLLMTAIYFHTWFEKLTGLLVALIG
LYGVY
4451 PF10206
(WRW)
 click to view
Estimated TM-score=0.52;
easy target.		 >Mitochondrial F1F0-ATP synthase, subunit f (Length=97)
FGDYPAEYNPKVHGPYDPARFYGKPDTPFGQVKLGELGSWFGRRNKSPQALAGAVSRAFWRWQHKYVQPKRTGVAPFFQL
TVSAMIFFYCINYGKIT
4452 PF10066
(DUF2304)
 click to view
Estimated TM-score=0.52;
hard target.		 >Uncharacterized conserved protein (DUF2304) (Length=105)
FRITLIIVSVFTLLYMCKKVKQEKLQIEYSIFWTLFAIMLVLFSIFPQIADWLSELVGVYSTTNFIFLLIIFILLVKCFQ
LTMDISKLDNKVKELVQKIAIDEKE
4453 PF10032
(Pho88)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Phosphate transport (Pho88) (Length=185)
LNPQITNLLIILGMMQVSKRVPFDDPNVLNSVRAIYVTSNIIIALVYFYVQSKINAKNDMTTLKYVEPAPMGSTEEPKLV
TTTIKDYDLAQLKTAWRGQLTGVAMMAFMHLYMKYTNPLLIQSIIPVKSLFESNLVKIHLYGQPASGDLKRPFKAAAGLM
GAMQGGATQSDKKAVEAAEKAGRGG
4454 PF09998
(DUF2239)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Uncharacterized protein conserved in bacteria (DUF2239) (Length=185)
SYTAFDGHRRLVSGPLATVALAVRQAAGDATPGTILIFDDATGRAIDLDLRGTADEIRARYAAAPADASAPASADEPRGR
GRPKLGVVSREVTLLPRHWDWLATQPGGASVALRKLVEDARRTHAAADRRRDAQARAYHFMSAIAGDLPGFEEAARALYA
NDLARLAELIAGWPDDVRDHALALA
4455 PF09971
(DUF2206)
 click to view
Estimated TM-score=0.52;
hard target.		 >Predicted membrane protein (DUF2206) (Length=375)
RAILSVIFAISLIVSHYGLSYIYLMSLVMVYIILIFVKSSFFKKIVRKFRPNVDPDSNNWNQTILTSTYVFLFIVFALTW
YMYLSSSSIIYKIFNIGNHIASSIFTDFLNPEAAQGAAAITFKTTSLLHEVAKYLNLLFQFSIFIGILALLMGRLKNYRF
KKEYVVFAMVNFIILIISIVVPYFASALNITRLYHITLFLLAPFSVIGGIILIRFFLTKISNKSWTKDRDIQLKIIYMGV
VVLFLFYSGFIYEISGDNPTSFSLSNIDYPVFNDQEVQGLQWLSTNREHGYVYADGYRLSLLSRSFTVSESKDIPQNFSQ
LKTDSYIFLGNYNTKTGTILIRNKNTTTKNDFYMDYSSLANTKSQIYTNGNVTIY
4456 PF09946
(DUF2178)
 click to view
Estimated TM-score=0.52;
hard target.		 >Predicted membrane protein (DUF2178) (Length=104)
MAIIVSMVALVGWFTAAGNALLVAISITAGVVLLYLCKSKIKEVVEDERDVKVSEKASKLAIEIFAATNILIGVVLIALR
YRYSEYTNIGFTLAFSASSLMILY
4457 PF09877
(DUF2104)
 click to view
Estimated TM-score=0.52;
hard target.		 >Predicted membrane protein (DUF2104) (Length=98)
LYLLYIISFVVGSIAGLVLSYKKYSAPFVAQNVDIVALVLAIVGWVLALNSQLITAVPSYISITVGIFLIALVLGMRPGY
GRYETFTGFVVAGLIWIL
4458 PF09684
(Tail_P2_I)
 click to view
Estimated TM-score=0.52;
hard target.		 >Phage tail protein (Tail_P2_I) (Length=129)
TPPLERAIEAATDEVAEVPLRVLYNPDTCPAHLLHQLAWAWSVDRWDEAWPEAIKRSVIRSAFYVHAHKGTIGALRRVVE
PLGYLIEVXEWWETVPQGVPGTFALQVGVLETGITEEMYQELTRLIDDA
4459 PF09617
(Cas_GSU0053)
 click to view
Estimated TM-score=0.52;
very hard target.		 >CRISPR-associated protein GSU0053 (Cas_GSU0053) (Length=170)
LRCVTEYQPAGGPGDKIFPPTYEGGKYATEERVIDGERVPCVLVDSVQSQANRMELALLEAWEREQLPLPVITVDFHDKD
VLKPLRVTSLEAPHRIADAILRDSTLGGKPFRKCEPGNSLDLVDNGYATPLFELCPTALIFGMWDSTGPRGGLGAKFARA
MVSEIIGLHA
4460 PF09580
(Spore_YhcN_YlaJ)
 click to view
Estimated TM-score=0.52;
hard target.		 >Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) (Length=160)
NHQRYRMQGANKQQRQGMMQGSNQQQRQGMMQGQQHQRSQQGQGHQGQQGQHRGYYDGEDGHLAQRIANRVEDMDKVEDC
RVIVNGDDIVIGVNTLDGDDQRVQQKIHRMTSDLDDHKDIYVSSDREQVDRIRGMDDRLRAGEPFDEVGATFNDMVQDLG
4461 PF09550
(Phage_TAC_6)
 click to view
Estimated TM-score=0.52;
hard target.		 >Phage tail assembly chaperone protein, TAC (Length=59)
FPWEEAIGFGLGVLRLPPEQFWRMTPRELACAVAAVRGSAGAPMDRAGLDALMQAFPDR
4462 PF09521
(RE_NgoPII)
 click to view
Estimated TM-score=0.52;
hard target.		 >NgoPII restriction endonuclease (Length=264)
TNILSAFRTIISNYQTNVQHVTNGSNRANNMGDGLEAFIKDAFANTFNETNEQTKLEVFSRIYSYSGNKNNPPDLILQNS
DAIEIKKLESASTAIALNSSYPKAKLFSNSTMITTACRTCEAWSEKDMLYAIGNVPKTTNQLKSLWLVYGDCFCADKEVY
ERIQQTISSGITSIPNVEFTQTNELGKVKKVDPLGITDLRIRGMWHIENPTKIFNYLYHYDETATFQLICLMKKEKYEAL
PLEDRNAIENLSNLHVTLSDIRIK
4463 PF09482
(OrgA_MxiK)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Bacterial type III secretion apparatus protein (OrgA_MxiK) (Length=184)
VMRVMYHPVSYLHASRFPSGWHREDQAAHPLLNHWILRHYHCPSDDGADRGDPFYRFLLDNWQRLGDAALLIGAHLLRNR
LLSEGRFILLSAPVQSFLALPLPPLTPGALPQEQEEPATTLLQDPDPAAWGAYCLLSMLKRLSPAVYRRACLLFPVEQPL
PQQATSLSPSSINLIKMALHHAQY
4464 PF09139
(Tam41_Mmp37)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Phosphatidate cytidylyltransferase, mitochondrial (Length=341)
LRQLLWEFKAPIRYAFAYGSGVFSQGTASGKDKPMIDLIFGVTYTQHWHSLNLTEHRDHYSFLGRMGSGVVAKVQDGFGA
GVYFNTYVEVNGMMIKYGVVNLDTFCKDLADWETLYLAGRMHKPVKVLRDDARVRLANQANLLSALRVALLLLPEEFTEQ
QLYHTIAGISYLGDPRMNLFTENPHKVANIVSNQLPNFRRLYSPLVDTLPNLVFKNDPKTNIPKDTILLQDMDIVRRGNM
VRRLPKAFRKRLYFQYQRKWQIPQLEYEKLVGTSEEREMMEGRQGGEFEQRIAADMENIRKEVKNVIKGTINWPSTSQSF
KGFFTTGFVKTWRYLGEKIKK
4465 PF08907
(DUF1853)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function (DUF1853) (Length=286)
RDLAWVILAPPMLSDTPWPQRHPLAGSDWVQAPERLQHWLRQLDRDSYGLLHWLAQARTRRLGLYYERLWQFAIQHAPGI
ELIAANMPIRREGHTLGELDMLLRDRDGVHHLELAIKLYLGPQNGDGHDAAQWLGPGCHDRLDRKLAHLCQHQLPISARP
ESREVLEALDIREFSAHLWLGGYLLYPWPGKATPPRGAHPQHLRGRWLHQKDWAEFAAQSPPGRWQPLPRHAWLAPAHYP
AEQTWSAEQLDAWLSDLEPQAPAQLLVRLVKNAQGDWEEAERLFLV
4466 PF08591
(RNR_inhib)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Ribonucleotide reductase inhibitor (Length=101)
NLLSVGMRVRKSVPEGYKTGTYSSFKLWSDQSTVSRPTASTKKRSTAASSQRELMPFCGINKIGGLSAQPVGSSDDEDYE
RDIPGLDDIPGLSSSQESVES
4467 PF08589
(DUF1770)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Fungal protein of unknown function (DUF1770) (Length=107)
AETVQTAHINRHPSPRHDLNPSTAADKAEPVSLREKPDGDDLDSLDDEAEDVQGEDGDDDDIPYSVLRPTPRRPAHQLPP
LPDLRFEQSYLRSIAKADTWWKVAWIT
4468 PF08499
(PDEase_I_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >3'5'-cyclic nucleotide phosphodiesterase N-terminal (Length=61)
QMLDTEDELREMRSDAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVER
4469 PF08488
(WAK)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Wall-associated kinase (Length=102)
DKICGGYRCCQAKIQADRPQVIGVNLESSGGNTTQGGDCKVAFLTNETYSPGNVTEPEQFYTNGFTVIELGWYFDTSDSR
LTKPVGCVNLTETRIYTSAPSC
4470 PF08310
(LGFP)
 click to view
Estimated TM-score=0.52;
hard target.		 >LGFP repeat (Length=50)
LGEPVGEEQVVSDSIRYQQYDNARIYWSEGQGVHSVSGAVLEAYLNAGGH
4471 PF08195
(TRI9)
 click to view
Estimated TM-score=0.52;
hard target.		 >TRI9 protein (Length=43)
MLAAAKLIDSYEMDPDVSWLEVFAYSGVSAALCATIWVAAKAC
4472 PF08039
(Mit_proteolip)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Mitochondrial proteolipid (Length=58)
MLQSIIKNVWIPMKPYYTQVYQEIWIGMGLMGFIVYKIRSADKRSKALKAPAPARGHH
4473 PF07989
(Cnn_1N)
 click to view
Estimated TM-score=0.52;
easy target.		 >Centrosomin N-terminal motif 1 (Length=72)
SLREQENVIDRIEKENFGLKLKIHFLEEALRKAGPGFSEAALKENTELKVDKVTMQRDLQKYKKHLTTAEKD
4474 PF07954
(DUF1689)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1689) (Length=162)
YNSALKFYEKDSALDSKDRLELSRTFVSIARAELWGGWAAFALVFGAPFGYRLYKTGAVRGVKVPRNFVLGLFAMFTTTQ
ACGRYAFNSKLAQLQNDGNFTPRGSFGDDDDQSRPETNQQRQYEMMKLVGYGMAPKWGNYFYTTFHNPEKRLPNPKVKLQ
EM
4475 PF07935
(SSV1_ORF_D-335)
 click to view
Estimated TM-score=0.52;
hard target.		 >ORF D-335-like protein (Length=68)
RYKYGDIIIRERKGRYYVYKLEMINGKVRETYVGPLIDVVESFIKLKEIGGVGISPTTDPPGFEPGTT
4476 PF07889
(DUF1664)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1664) (Length=124)
GGLSSYILPAAAVGAMGYCYMWWKGLSLSDVMFVTKRNMANAVQSMSKQLEQVSSALAATKRHLTQRLENLDGKMDEQVE
VSKTIRNEVNDVKDDLSQIGFDIEAIQQMVAGLEGKIELLENKQ
4477 PF07812
(TfuA)
 click to view
Estimated TM-score=0.52;
hard target.		 >TfuA-like protein (Length=120)
DGYFETVPTVWHKEILWAMSQGIHVYGAASIGALRAAELADFGMKGVGHIYRQYRTGELTDDDEVAVLHGPAEVDYVQVT
EAMVNVRATLEHALQSGIVEPDVASALVEVAKSLFYKDRT
4478 PF07800
(DUF1644)
 click to view
Estimated TM-score=0.52;
easy target.		 >Protein of unknown function (DUF1644) (Length=159)
AAKCSVCLEFPHNAVLLLCSSYNKGCRPYMCATSKRFSNCLEQYKKAYTKVTSADSMDNSSLTSGVEQPTEKMEVPELLC
PLCRGQVKGWTVVEPVRKYLNREKRSCMQDKCSFVGTYKELKKHVRTKHPLARPRAVDPVREEKWKKLENERERNDVIS
4479 PF07778
(CENP-I)
 click to view
Estimated TM-score=0.52;
easy target.		 >Mis6 (Length=516)
SQKRKRVSRGRRSTQTDLAAWRLGERTSGSKPVNLKTGQKQREEDFTSDDDQAQDGERDSLRKALRYFEKGQISVPLRKN
PTLQKHLETVENVAWRTGLPPESIDTLLNVALSGRFAEAVNTRLLKCMIPTTLILETSIVAAVSWLCVGKCSGSNKILFF
RWLIAMFDFVDHKEQINSLYGFIFAFLQDENLCPYICHLLYLLTRRENVKPFRVRKLLDLQAKMGMQPHLQALLSLYKFF
CPELVSISLSTNRKTYFKDSECLWKTALSAVRQRNQGPSPGSPKLILGTTSIQSRRRKWNTSLVVPLCSSQDSNPQSGNR
ELKLVHFLKTDESFPPEQLHTFSQLLQNAHCLELPSQMGSVLKNSLLLHYLNCIKDESVLLRLHYWINNTLKEDCIWHPT
GDHLDNEEFKEFLNLIFRTECFLQEGFSSCEKFLYKSLPSWDGFGFRSQILPLVTWIPLRNFSEIKALLCEPLAQLFFTS
SIYFKCSILQTLRELLQNWLLSHATDMDEEPIINSP
4480 PF07762
(DUF1618)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF1618) (Length=136)
WVDLWRNIIFCDVLAERPKLSYLNLPPALRPRPNMGAGDARSHRNIAVLGNTIKYVEMLPHPDRSSSKPASHRWEVAAWS
IQKANRSWPKDWHTECNLDSTHIKVDSGTTAAALPTLSTLHVGLPTVSLQNDAIIY
4481 PF07734
(FBA_1)
 click to view
Estimated TM-score=0.52;
easy target.		 >F-box associated (Length=156)
GLSLKGNTYWYAIDYETEDCFLHYFDFTRERFENRLPLPQPPSSYSYAQVNISLSSVKEEKLAVLFSPRGRFVIDIWVTN
KTEPDAVSWSYFFKVETTQHLSGFLFENFLIDEEKKVIVIFDIYGGANNAYTISGETGHFRKVDLRQSPYKRPYRL
4482 PF07583
(PSCyt2)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Protein of unknown function (DUF1549) (Length=207)
PIDAFILHRLEAQQLKPSPEADRTTLIRRLSLDLTGLPPSVKQVQEFLADTKPGAYERLVDRLLASPHYGERWARHWLDV
ARYADSNGFTIDGPRSIWKYRDWVIEAINANMPFDQFVTEQLAGDLLPKPTTEQLIATGFHRNTLINQEGGTNPEQFRVE
AVVDRVNTTGAAFLGLTVGCAQCHKHKYDPITQRDFYQLYAIFNSTA
4483 PF07292
(NID)
 click to view
Estimated TM-score=0.52;
hard target.		 >Nmi/IFP 35 domain (NID) (Length=88)
LLTLEDEEVAHKLTQMGKHTVNLDGKTADLKVVPFTVGMGVKFELHVTISGKKINVSEIPELPIPDEWMRDKLELNFYKS
KHGGGEVE
4484 PF07259
(ProSAAS)
 click to view
Estimated TM-score=0.52;
very hard target.		 >ProSAAS precursor (Length=188)
MARSPLLCGPQAGGVGLSVLLLLGLLRPVPALGTRPVKEPRGLGAPSPPMAETGASRRFRRAVPGGEAAGAVQELARALA
HLLEAERQERARAEAQQAEDQQARILAQLLRLWGSPRPSDLSLGQDDDPDAPATQLARALLLTRLDPAALAAQLLPVPAS
VLRTRPSAYDDRPTGQGAEDAGDWTPDV
4485 PF07227
(PHD_Oberon)
 click to view
Estimated TM-score=0.52;
hard target.		 >PHD - plant homeodomain finger protein (Length=119)
CKNSACRAVLSVADTFCKRCSCCICHLFDDNKDPSLWLECTSDSSHGESCGLSCHIECALQQGKVGVVNLGQLMQLDGSY
CCASCGKVSGILGYWKKQLTIAKDARRVDSLCYRIYLSF
4486 PF06887
(DUF1265)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1265) (Length=47)
EELQKNYEDIMYVCNMLIIAEDAHFTNVQSCCIATLVFYHVRDFIRI
4487 PF06798
(PrkA)
 click to view
Estimated TM-score=0.52;
hard target.		 >PrkA serine protein kinase C-terminal domain (Length=250)
IKKMKLYDGESVEGFKQKDVAELQAEAEGEGMSGVDPRYVINRISSALITKDTKCINALDILRALKEGLDQHPSITRDER
EKLLNFIVLARKEYDEVAKKEVQRAFVYSYEESARTLFDNYLDNVEAYCNGVKVKDPISGEELDPDEKLMRSIEEQIGVT
ENAKKSFREEILIRLSSYARKGKKFDYNSHERLREAIERKLFADLKDVVKITTSTKTPDPEQLKRINAVIDRLISNHGYC
PICANELLKY
4488 PF06796
(NapE)
 click to view
Estimated TM-score=0.52;
hard target.		 >Periplasmic nitrate reductase protein NapE (Length=52)
TDQKDQSTRGREWKAFLFITVFLFPILSVMVVGGYGFIVWMLQLFVFGPPGH
4489 PF06763
(Minor_tail_Z)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Prophage minor tail protein Z (GPZ) (Length=192)
MKGLENAIRNLNSLDRQMVPRASIWALNRVAQKAVSVATRKVARETVAGDNQVRGIPLKLVRQRVRLFKAGTDGKRSARI
RINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQ
AFESATQSLIDEEMPKQLGYALKQQLRLYLSR
4490 PF06756
(S19)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Chorion protein S19 C-terminal (Length=71)
GNHGGNYGGHQRGYGRPRWSVQPAGATLLYPGQNSYRRYASPPEYTKVVLPVRAAPPVAKLYLPENNYGSH
4491 PF06749
(DUF1218)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1218) (Length=96)
AAVLLLLAQVTVSAIGGCGCCCGNGKPRGIPSSKTNRVVGIVFAVASWIAAVIAVVLFVEGAAWNANVARDTAPVCYFLK
DGVFAAAAVLALAATA
4492 PF06741
(LsmAD)
 click to view
Estimated TM-score=0.52;
hard target.		 >LsmAD domain (Length=71)
FGVKSTFNEELYTTKLDRGPQMRELEKEALRLAREIEGEDTQDLHLAEERGIHFHDKFDLDEETKYSSVTR
4493 PF06738
(ThrE)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Putative threonine/serine exporter (Length=238)
VCLLAGKMMMQNGGETYRVEDTMMRIAAAYGMKDSQSFVTPTGILFALDGSSPTTRLIRISERSTDLNKVTLVNDISRRI
TRGELTPDEAHRLLKQAEAAPAAYPPWLQIVLAALASGCFLLMFQGRMADFIPAVLAGGLGFAALIWFHRLVPIKLFAEL
VASVVVGMLSVLLVQAGLGQELDRIIIGSVMPLVPGLLLTNAVRDLIAGHLVSGLSKGAEAFLTAFAIGTGVAFVLSV
4494 PF06709
(DUF1196)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1196) (Length=51)
MTVPLEAFVMCVFLMPTLPFKGVAKGIYAKQHSIKNYHIHKTKMLHVDIFR
4495 PF06673
(L_lactis_ph-MCP)
 click to view
Estimated TM-score=0.52;
easy target.		 >Lactococcus lactis bacteriophage major capsid protein (Length=347)
MGVNETQEMMKQAIEAGVKVRELETKVEELNKEREELKKEREANIPSEKPQDVERKFMRELGDKMTEMPEQGFLREFANA
SALNVVNSLGSITSKYARKSGIYDGAMKARFQGLTLAEDGVDDTFIEGTFKAGTDKNKAQTASKRSLRPQMAEAYLQMDK
ATVRGVNDSGALSEYVMSEMVNRVIQKVEHNMILGSADGSNGFYGLKTATDGWTKQIEYTDLFDGITDAVAECSISDAIT
IVMSPQTFAELRKAKGTDGHSRFNELATKEQIAQSFGAVNLETRVWMPKDEVAVYNHDEYVLIGDLNVENYNDFDLRYNV
EQWLSETLVGGSIRGKNRSAYLTKKAS
4496 PF06667
(PspB)
 click to view
Estimated TM-score=0.52;
hard target.		 >Phage shock protein B (Length=71)
AMLVMPLVIFMIFVAPIWLILHYRSKKQVNQGLSAEEQASLQSLAEQAEKMSDRIQTLEAILDSEAPEWRN
4497 PF06634
(DUF1156)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1156) (Length=72)
ALPLEAINKAAAREKSIRHGHPSTLHLWWARRPLAAARAVIFAQMVDDPSAHPDLFPTKEKQEKERNRLFKI
4498 PF06633
(DUF1155)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1155) (Length=42)
MSATLSTTLSFEPPLSLLAEPGTWFADTMDFRKKHSVRWYES
4499 PF06592
(DUF1138)
 click to view
Estimated TM-score=0.52;
easy target.		 >Protein of unknown function (DUF1138) (Length=66)
GKYIIGSLVGSLGIAYVCDAIVSDKKIFGGTVCKTATDKEWFQATDAKFQAWPRVARPPVVMNPTS
4500 PF06493
(DUF1096)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1096) (Length=51)
GTTLREKRQSCGCAPAVQPSCSCQRTTYTQPQQYSCSCQNTAPVQKSCSCA

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