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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 47)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4601 PF15085
(NPFF)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Neuropeptide FF (Length=109)
SQALHIQGGLDKNDILPGSSEENMPDRLLGLESENRDSDTDDRVLTSLLRALLHGAQREARESVLHQPQRFGRSSRGQVV
LEDQMHSRDWEAAPGQIWSMAVPQRFGKK
4602 PF15061
(DUF4538)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4538) (Length=57)
LKGWRYGAFIGSIVGLIGLACYPIIIYPMMHVDEYKKIQKINRAGINQEDIQPGNMR
4603 PF15031
(DUF4528)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4528) (Length=126)
KPKASEVLSAHLRQRGLPHWTSYFVKYSSVRNDQFAKSHFNWSVDGQNYHILRTGCFPYIKYHCTRRPYQDLSFEDKFYT
GLKIINFGIPCLAYGIGAWFLVTTTEDVKMPQGTVKVYFWYKEDHD
4604 PF15017
(WRNPLPNID)
 click to view
Estimated TM-score=0.51;
hard target.		 >Putative WW-binding domain and destruction box (Length=73)
DQFSSFLFWRDPLLTFSDELLGLLKEGNESPQTEERAEQRASAGQSDDEDKENEPDDEVDEEDDDDGGGWITP
4605 PF15013
(CCSMST1)
 click to view
Estimated TM-score=0.51;
hard target.		 >CCSMST1 family (Length=75)
DKPLQYFNSPASRWRAEHTRSGQDNEDMPWYQPYVVIASMAVFMLYFCVLREENDIDRSLEKSLYEHIPGLEEKQ
4606 PF14990
(DUF4516)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4516) (Length=46)
MPAGVSWPRYLRMFTASVLSMFAGAQVVHQYYRPDLTIPDVPPKPG
4607 PF14971
(DUF4510)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4510) (Length=161)
CAPEVPAAASQPTFLPWVPEHGGGELDLVVRELQALEEELRAAAERRRAAWEAKAGGCGRGPEWSAARRASREAVEKELG
ALQQCWEQDGGPAQPHGPHRLVRREDGAAGDRDLRAAVVIRTLRSQEACLEAVLRRLQGQCRQELARLVGALPGLIWIPP
P
4608 PF14929
(TAF1_subA)
 click to view
Estimated TM-score=0.51;
hard target.		 >TAF RNA Polymerase I subunit A (Length=360)
EALLKHQWQRAAEYMHSYLQILEDSDSNKRQAAPEIIWKLGSEILYYHPKSSVETFNTFADRMKNIGVLNYLTISLQHAL
YLLHHGMFDDASRNLSQAETWRYGEKSSSQEALINLVQAYKGLLQYYTWSKKKKELSELDEDDYAYSTASQNMFKHSWKT
STNFSALIQTPGVWDPFVKSYVEMLEFYGDQDGAREVLTNYAYDEKFPSNPNAHVYLYNFLKREKAPREKLISVLKILYQ
IVPSHTLMLEFHRLLRKSDKEEHHKLGLEVLFGVLDFAGCTKNMTAWQYLAKYLRQILMGSHLAWVQEEWNSRKNWWPGF
HFSSFWAKSDWKEDKALAYEKAFVAGILLGKGCRYFRYIS
4609 PF14632
(SPT6_acidic)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Acidic N-terminal SPT6 (Length=90)
SSEEEEDDDDEEEARKVREGFIVDEDEDEEEGGESDGDVRPVHKRKRKHRDREEEAQLDEEDLDLIGEQFGERPKPQTQS
KFKRLKRGYR
4610 PF14449
(PT-TG)
 click to view
Estimated TM-score=0.51;
hard target.		 >Pre-toxin TG (Length=66)
QTFSAVLDFLPFIGNAKAGQEASTGVDLITGQELDEWDRGIAAASIFLGGIGKVGGRTLKNIVKGS
4611 PF14380
(WAK_assoc)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Wall-associated receptor kinase C-terminal (Length=106)
NCKTFSNGPDGGDSFVFTSGELEAPVESELARRCSQVIVVPVNGSILNSSNQSALPSGGYGEVLNKGFDLAWTSRKDGQC
YQCEKFQGQCAYSQNRIFLSCLCSDG
4612 PF14331
(ImcF-related_N)
 click to view
Estimated TM-score=0.51;
hard target.		 >ImcF-related N-terminal domain (Length=258)
ADKAAWTGFLQLLKKHRRRRPINGVIVTVPVSDLLQGTEAGRQAQAQAIRDRLKELHDQLGVRFPVYVLVTKCDLLGGFV
EFFDALGREERAQVWGMTFPLQDGMDGDAALAVFPAEFEQLEQRLQERVLARMQQERDPHKRALVYSFPQQFAGIEDVLK
RFLDDVFASNRYERQALLRGVYFSSGTQEGSPLDRVMSAMAASFGLERQALAPNAASGRSYFITNLLQQVVFPEADLAGV
NHALEKRRRMIQWGTVAA
4613 PF14267
(DUF4357)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4357) (Length=54)
REQLLNQGVLEQQKNVYVFTSDYFFSSPSAAAAAVLGRRANGWAEWKDEDGKTL
4614 PF14217
(DUF4327)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4327) (Length=67)
YSLDVIQDEARQLVEKGVISRQQPIYTLCQYIPPREWVCVECELEKCDFLLRDRIADLIGREEWDND
4615 PF14209
(DUF4321)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4321) (Length=48)
LWWLSYEQEFGINAPIVLDLSVLKLTFGLMFKINIASIIGMVLAIFIY
4616 PF14194
(Cys_rich_VLP)
 click to view
Estimated TM-score=0.51;
hard target.		 >Cysteine-rich VLP (Length=56)
TPAQRRRANALVRKTCCNYDNGNCLLLDDGEECVCPQTISYSVCCKWFRWAVLPQD
4617 PF14162
(YozD)
 click to view
Estimated TM-score=0.51;
hard target.		 >YozD-like protein (Length=55)
MKEIEVVIDTEEIAEFFYRELIRRGFVPTQTELEELADITFDYLLEKCIIDEELD
4618 PF14138
(COX16)
 click to view
Estimated TM-score=0.51;
hard target.		 >Cytochrome c oxidase assembly protein COX16 (Length=78)
LLFGLPFISIIVAGSFVLTPATAIRYEKHDRRVRQMTKEEELGLGKDRRQVDIREEYYRLAAKDLDNWEQKRVERFKG
4619 PF14058
(PcfK)
 click to view
Estimated TM-score=0.51;
very hard target.		 >PcfK-like protein (Length=135)
SSNFETTIQAYLENRAKTDSLFAETYRKANKSIEECIKYIYSKARKLAKGGNAVGVDDATVYGWAVHYYDEDDIKVKDVK
ERVEVVAPTTVQEPVVQEPVKEEKPEPVKQKSARKKTKQELQKIFDSRQLSLFDM
4620 PF14047
(DCR)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Dppa2/4 conserved region (Length=65)
DKWCVVHGCSLPADAGGWVQLQFHAGQAWVPEKKGRVNALFLLPSGTFPPPHLEDNLLCPTCVRR
4621 PF14035
(YlzJ)
 click to view
Estimated TM-score=0.51;
hard target.		 >YlzJ-like protein (Length=66)
LYTPMQLELVLEGFDRTEYPEYREINYDGVPLLVERTEHGKNRIVKLLSTNPYDYLRAELAPGNLI
4622 PF14022
(DUF4238)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF4238) (Length=284)
NQHYVPRGYLRGFTIPGEKSLIWQYDKNTGEIFKRPKSVNRICSEFQYYAQKNEDGSTDKETMENAFHEIEDKTPRIIKK
INSLNNAEKVIISEDEKAVLSFFTAMQLTRVPNFRNGIEEMYRKVVEIGLSHQVDKARKDGTLPVSIDSLYKQGKINIDI
ESFVSLKAMLATAQEGAINLMGKVWHFAMPAKGMSFVTSDNPVFFQAPEKYRELNSQIGPFHPVSEVTLPLSSDLLLIFS
PSANYSKSEYDLINMTAVQLDEKDTDNLNKRSILAAKQYVYSSE
4623 PF13978
(DUF4223)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF4223) (Length=54)
MKKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTA
4624 PF13974
(YebO)
 click to view
Estimated TM-score=0.51;
hard target.		 >YebO-like protein (Length=80)
ISLVVLLVGLVIWFFVNRASSRANEQIELLEALLDQQKRQNALLRRLCEANEPEEKDAPKDAVVEENKDEDDFIRLVAER
4625 PF13922
(PHD_3)
 click to view
Estimated TM-score=0.51;
easy target.		 >PHD domain of transcriptional enhancer, Asx (Length=68)
QQPQQQAVHPLLQLRQSGENTPPGSEAATAPANNCACSLNAMVICQQCGAFCHDDCIGAAKLCVSCGI
4626 PF13890
(Rab3-GTPase_cat)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Rab3 GTPase-activating protein catalytic subunit (Length=155)
SKAEGRLHPYNNMTLLNSMEPLYVPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGTHLRARMQSACLLSDMESFKAANPGC
VLEDFVRWYSPRDYVKEEVADERGNTVVKGELSARMKIPGNMWVEAWETARVTPARRQRRLFDDTKEAEKVLHYL
4627 PF13763
(DUF4167)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4167) (Length=78)
RGRNNNNRSNNNKGPNPLTKSYESNGPDVKIRGTAQHIAEKYSQLARDAQSSGDPVAAENYFQHAEHYFRIIAAAQEQ
4628 PF13747
(DUF4164)
 click to view
Estimated TM-score=0.51;
easy target.		 >Domain of unknown function (DUF4164) (Length=86)
KTIEAALKELKQAISSLENAVDMRIERQREQGEIEGEVRRVHADRSRLAQELDQAEFRANRLEEVNREVSRRLVTAMETI
RAVLDR
4629 PF13726
(Na_H_antiport_2)
 click to view
Estimated TM-score=0.51;
easy target.		 >Na+-H+ antiporter family (Length=87)
NPVVISVIVMSVLCLFKLNVLLSILLAAMTAGVAAGMPIKETMNTLIDGMGGNSQTALSYILLGTFAMAISKTGLATILA
KKISQVV
4630 PF13598
(DUF4139)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4139) (Length=285)
IKLSYVTNNASWEPAYDVQVESINQPVKLSYKATIFQNSGINWDNVKLTLSTINLSDRAQTPHLSPWSIELYNANSKRSL
SYYEISGANSLYTRFRLPMPCNIATGGKGQVVLIKQSEVLGDYRYVVAPRIDTTAFLQVQVKNWQKLNLLPGKASIFFAG
SYVGQQRIDTTDDQDTWDLSLVRDDKIMVSRKKEKHLTSKAGFWGNRIRQQYSYVTQVKNTHNEPISLVVFDQIPLSSDE
AITIAGLDYGGGIYDRNSGDVHWKVNLAAGDSQQFTLGYTVNSPK
4631 PF13552
(DUF4127)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF4127) (Length=504)
IMYIPLDERPCNYEFPKMIIDISDIDMIRPPKEILGCKKKPADVDKLWEWMRQNIEGITHLVVSIDMLVYGGIVPSRIHQ
KQVEECLSKLLRLRELKKANNNLKIFAFNLIMRTPSYNSSEEEPDYYKEYGERIFRFGAFSDKIDLNIATEEEIKEFNAL
KREIPEEILEDYLRRREVNHKINLSVVDLVKESIIDFLIIPMDDSSKYGFSPMERRKIMKYIDELDLTDRIYSYPGADEV
GCTLTARAFNDIKGVKPAVFTRYSSENGKNVIPLLEDRRLGETVKYQIIAAGGIVTEDSEKADFILMINPPSEITQQIGD
SWNSYLTRKDIGDPERNLNEFVEAIKDYIEKGKNCSVADVAFLNGADNSLMKLIKKYGLLKKLLSYGGWNTSANTLGTVI
AHSMASSFYINSDNFTEDRKERSYRFLFLRYLEDWGYQYEVRTKVAKEIDKYGVSYFDLGEKEKIISEVIKGELEKFKKE
NLNEFDYEFNVYMPWNRLFEVGIE
4632 PF13400
(Tad)
 click to view
Estimated TM-score=0.51;
easy target.		 >Putative Flp pilus-assembly TadE/G-like (Length=47)
GATAITFGLLLVPLLGFAGLAVDYSRASNDRSRLQNAADAAALAAAS
4633 PF13062
(DUF3924)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF3924) (Length=62)
MNTLTIELPKETAEKLDLLKQAYEKKTGASISESTLVQTLISKEFIQAITPFDLQQFVNGKE
4634 PF12992
(DUF3876)
 click to view
Estimated TM-score=0.51;
easy target.		 >Domain of unknown function, B. Theta Gene description (DUF3876) (Length=92)
SCSESRFKDCDRLCGSWSSVEGKPDVLIYKEGDAYKVTVFARSGKTRKLKPETYLLVEENGNLFINTGYRIDIAYNEAAD
VLTFSPNGDYVR
4635 PF12926
(MOZART2)
 click to view
Estimated TM-score=0.51;
hard target.		 >Mitotic-spindle organizing gamma-tubulin ring associated (Length=89)
SAPDSPALVVTSNVQKYAIKKKKVLNAEEMELFELTQAAGITVDQEVFKIIVDLLKMNVAPQAVFQTLKAMCAGQRVADS
NGGESSTIS
4636 PF12856
(ANAPC9)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Anaphase-promoting complex subunit 9 (Length=128)
RLIKSKLLNLHQSSKQKTTWKYHPNKSVPSFIIRKPINMNGYDYSVFTNYPTEIDLQHGEHLPPAIKESQIKSWESAERI
STNVIFGNSSESEDDIDELDEDEHTEASRSSKVNSRKNNVIQAIPGYT
4637 PF12805
(FUSC-like)
 click to view
Estimated TM-score=0.51;
hard target.		 >FUSC-like inner membrane protein yccS (Length=285)
ALLVTLLCFSVAAFAVELLFPYPWLFVSGMALSAFGMILLGALGERYAAIASATLILSIYTMIGVDQRGGEVADVWHEPL
LLVAGAAWYGLLSVLWNALFSNQPVQQSLARLYFELGEYLRIKSSLFEPLRQLDVEGQRLALARQNGKVVVALNQAKETI
LNRLGHGRPGPKVSRYLKLYFIAQDVHERASSSHYPYNRLAEAFFHSDVLFRCQRLLNQQGKACQALARAIRLRQPFDYD
DSEQALEDLQASLEHLRQQSNPAWKGLLRSLGALAANLATLDRKL
4638 PF12749
(Metallothio_Euk)
 click to view
Estimated TM-score=0.51;
hard target.		 >Eukaryotic metallothionein (Length=65)
MDTQTQTKVTVGCSCNPCKCQPLCKCGTTAACNCQPCENCDPCSCNPCKCGVTESCGCNPCKCAE
4639 PF12601
(Rubi_NSP_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Rubivirus non-structural protein (Length=66)
VCAVGGGPRRVSDRPHLWLAVPLSRGGGTCAATDEGLAQAYYDDLEVRRLGDDAMARAALASVQRP
4640 PF12551
(PHBC_N)
 click to view
Estimated TM-score=0.51;
hard target.		 >Poly-beta-hydroxybutyrate polymerase N terminal (Length=40)
DTADRALHAAQARLTGGISPISIASAAFNWTLQLANAPGR
4641 PF12505
(DUF3712)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF3712) (Length=127)
LGTFSLQSLSANPKIRRAYINQTTELTVADEDAFGRFTAYMVTSQNFTWRLKSDNLEARALKLPISKGLKFTKDITLNGI
NNFQNNAVITDFQLPSDSPAGGINYVATTELYNPSPFKLGLGVVSFA
4642 PF12442
(DUF3681)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF3681) (Length=91)
NAEKLPAAMISCGVVEAAAAIFLAAFKAPGGIFLHHGKAPFYLYYGIIGGVAIFGFAEAWAGFWVSGDLNGRRIVGKTIL
WVGMLPLVLFM
4643 PF12395
(DUF3658)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (Length=112)
KNEPPLSQHERENFEKEWLALANTREVLRIWQNRTIHSVSEDYYDLFIINRAKKLHNEMKTKDFIKSVRLIGEVLGHLDQ
YVGDEFLEYRLRKLIEKRAFEMEGSLEAMAFY
4644 PF12313
(NPR1_like_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >NPR1/NIM1 like defence protein C terminal (Length=205)
RRLTRPKDYHAKTEQGKETNKDRICIDVLEREMRRNPMAGDACMSSHTMADDLHMKLLYLENRVAFARLFFPSEAKLAMD
IAHAETTSEFAGLSASNSKGSNGNLREVDLNETPIVQNKRLLSRMEALTKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYL
EKGTHEEQRIKRTRFMELKDDVHKAFNKDKAEFSRSGISSSSSSS
4645 PF12271
(Chs7)
 click to view
Estimated TM-score=0.51;
hard target.		 >Chitin synthase export chaperone (Length=298)
GFGSFVYLCRNTGSYPFCNLFWRQLSKANFTLPVVTRAPVGILPRCGIPLAGNGRFGNVADIIFCAISFIFIVYLSQRCL
GNAPSITGRIEIRAMFVLYAVLMLLQTVTAGSIFEQGSLPLLILTCLHAGAVAAFFWCLLANAFVATQYVEDGTPSSLIP
FYGFAGIFFATTAYISADTAFSYTNLFKSTPPRDLRNIALFILLVIWPAVSVLLYAGIMSYIVVNILGEKRPLMYYLGAL
VVFIGAQLAYLFLGTAICQGTNRFIDSAFIATLLETTAMGLLFIGWRTITESKWEDQV
4646 PF12251
(zf-SNAP50_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >snRNA-activating protein of 50kDa MW C terminal (Length=204)
QTMLVLGSQKLTELRDSICCVSDLQIGGEFSNTPDQAPEHISKDLYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESH
DRGYGKFQTARMEDFTFNDLNIKLGFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRKLYPLLTKKHWLWTRKCFVCKMYT
ARWVTNNDSFAPEDPCFFCDICFRMLHYDSEGNKLGEFLAYPYV
4647 PF12233
(p12I)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Human adult T cell leukemia/lymphoma virus protein (Length=99)
MLFRLLSPLSPLALTALLLFLLSPGEVSGLLLRPLPAPCLLLFLPFQILSNLLFLLFLPLFFSLPLLLSPSLPITMRFPA
RWRFPPWRAPSQPAAAFLF
4648 PF12141
(DUF3589)
 click to view
Estimated TM-score=0.51;
hard target.		 >Beta-mannosyltransferases (Length=463)
CEDVNIPETMSINKYYQFQEDLYQVVEILQDQLDNDPAFKDLAPFFEGKIPEMIKNQTVTDHFYKFMGTSVWLKQYGVHL
MISRVLFTRTGIRFKPQLSLMYGQLFNENWQELHNVTLRIPDSFSEQPGSSSDMAFTFPTFLPIPFFHDSNNVKYRYYGP
EDGRILLVQNQNGFEEPIVVFNSFTKTKENDNSKKVKLHRSMFVGWLFQSQTGKENTDAFKDTKYDNVTYTKVRQFTIAN
ETSTKRQEKNWTPFIDPQERTTHDGNIYLIYEWNNLLVLKCELTNFTSNAFSYCHRIYNETSQDKIGPLRGGTELIPVNH
IKTDNQIWIGFIRSHIGKCGCGTTMYHPHLVILQRQGDLFRVSHMSSSISFNIPAKSLTNNNPNKCGVGVANVLMANGIS
NWEIDETSGIDYLTLTFSSGDEDTSIVHIKDFSKMLERLDLDEPWNETTDKMRDCVLIESKQF
4649 PF12133
(Sars6)
 click to view
Estimated TM-score=0.51;
hard target.		 >Open reading frame 6 from SARS coronavirus (Length=62)
MFHLVDFQVTIAEILIIIMRTFRIAIWNLDVIISSIVRQLFKPLTKKNYSELDDEEPMELDY
4650 PF12084
(DUF3561)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF3561) (Length=107)
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFVSWLCALAIPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLVTVGIMFGALFMWLLG
4651 PF12025
(Phage_C)
 click to view
Estimated TM-score=0.51;
hard target.		 >Phage protein C (Length=68)
DLSLRSSRSSYFATFRHQLTILSKTDALDEEKWLNMLGTFVKDWFRYESHFVHGRDSLVDILKERGLL
4652 PF11879
(DUF3399)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF3399) (Length=102)
MQSKRNGLLSNQLQSSEDEQAFVSKSGSSFETQHHHLLHCLEKTTNHEFVDEQVFEESCMEVATVNRPSSHSPSLSSQQG
VTSTCCSRRHKKTFRIPNANIS
4653 PF11703
(UPF0506)
 click to view
Estimated TM-score=0.51;
easy target.		 >UPF0506 (Length=58)
CKEYGESCMKTVFNKCCGSNVCQLTGPFNGKCVRCIQTGYSCLHNGECCSRNCWLFRC
4654 PF11661
(DUF2986)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2986) (Length=43)
MNRKKKINQTLQKRLKKQHAKLHPSNKPRYISKAERAKLAAEQ
4655 PF11279
(DUF3080)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF3080) (Length=319)
DEYLERLARVLDTAPVPRAELPAASIPPRRRERILALPELDLGMLDFLSLYGCELQYVVGERNSVMGKVMQPINQLRYEI
RFIRAAEACLPEVDDEELTEALESAIESKRDSLPLAVWNATWGTEEVERQFTLSKGYYPVAEAGNPASDLVRDLQQLNRQ
VEAILAQKLEISLKNLGQVHQRWQADVLAGQTINSARLLISTLNAGTELLGSRLEGRPLCLNGQPNNESEIVQNFFFSIY
IEKIQPYMSDVSRARDSLIAGFAELARQQQAVMPESFTPWYQRHLAADTPDSLWQELDQAMMRHTRHWQDLLGQCGLRP
4656 PF11262
(Tho2)
 click to view
Estimated TM-score=0.51;
hard target.		 >Transcription factor/nuclear export subunit protein 2 (Length=334)
WQKITPELYANFWALQLGDLYCPDKIYRQEKDRLRAEEVAISRDRSDMSRRGQERKVEKRKELMQLQIGLSEENSEHLLR
QAKWKIYLNKQFQTSFPEPRAKPDTISDILLEQCFIPRMLLSKADAEYTYKFIKALHEGNAPGFQLMSLYDRLFNANRLR
ALIFTSTVMEAEYLGRFLKLILEDLSRWHKNATVPNEKDKSRDQPRLGVYEKEAKGPPDQPRLGFALTFDDNDKPLTFVE
HEQFRDLLFRWHKNLNSALRSCLEGTEWMHIRNAITVLKAVLDFFPAIDFMATKFSSLLQTITKQESAAKPSPDSEVGGR
VDLSVAAQGAMSEL
4657 PF11157
(DUF2937)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2937) (Length=159)
LRSYLRLTLFAFGLLLGVQVPGFIDDYAKRVEAHRLESQQSLKGFQETAQKFFKGDMDALVAHYRVSDDPVMRSDAKSVG
HLVQRSALLEREWQAMQGPWYAQAWHLATGADHELFQETLRAYRYQVLFTPDAILWGVISALLLAWLAELLVLIFGWLF
4658 PF11146
(DUF2905)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2905) (Length=62)
KLLITIGVVLIVLGVLWPLLQKSGLGRLPGDIAVEKENFKFYFPITTSIIVSIVLSLILWFF
4659 PF11084
(DUF2621)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2621) (Length=139)
EGWFSWFIVLWTVILLGLMSIGGYFMFRKFLKRLPKEDGMSILDWEEHYINKTRHLWNDEQKQLLEELVSPVPELFRDVA
KSKIAGKIGELALKEKASQITQDLIIKGYIIATPKRDHKFLVKKLQEKEIDYSHYESLL
4660 PF11072
(DUF2859)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2859) (Length=146)
VEDRGGASALPYYQSLNPQPDQATPPAPMPAPRVGNAADAEAAMLPVRSTQLSPGDVQRRVIRAPGLTPLFLIGDDERSR
AWLRQRQAALRELQAVGLVVNVESMAALTALRRLAPGLTLSPASGDDLAQRLGLRHYPVLITSTGI
4661 PF11023
(DUF2614)
 click to view
Estimated TM-score=0.51;
hard target.		 >Zinc-ribbon containing domain (Length=111)
KYSSKINKIRTFALSLIFIGFIVMYGGIFFRNSPIIMTIFMILGLLCIVASTVVYFWIGMLSTKTVQVKCPNCGKATKIL
GRVDICMHCNEPLTLDKNLEGKEFDEKYNRK
4662 PF10866
(DUF2704)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF2704) (Length=167)
VKTEQAEASGDNNRKVVDANVDEYTVDGLKLKSKYVAYYKCLKILVDFLVMYVSKEVSMKEYEQVYTLGRQLYEVLRSIF
VDEPFKLWLERNTQEFDNNKDKILETLQSELKFALADKNKLKTCTFKDIITNLLNTKLDCKYDCVDEYIKPNCIVDTYNC
CNLVFKK
4663 PF10809
(DUF2732)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2732) (Length=74)
MRNIVTRSFNTDSDALAILLTDAKKEERKDRALAVSIRLEALAIHIIKEGMSCTEAAELLRREATRFENESQEL
4664 PF10795
(DUF2607)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2607) (Length=94)
TRLRCPHYRAQSIALCAMLLMLWLNVAYVDHHLDTNPAHHAQHHCQLFSGFQNGLSSALPILPVISGSEIRSSVEKTQRR
PSVHYAYLARSPPH
4665 PF10784
(Plasmid_stab_B)
 click to view
Estimated TM-score=0.51;
trivial target.		 >Plasmid stability protein (Length=70)
QYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVM
4666 PF10768
(FliX)
 click to view
Estimated TM-score=0.51;
hard target.		 >Class II flagellar assembly regulator (Length=134)
MRIYGPNGTTLGTPASQARRTGSGTFVLPDTSSAQETRSAAAPKAAANIDALLALQGVEEDPVERRKRSVARGKTALDVL
DELKMGLLSGNLDASTVMRLRDAAANLKSSSGDPGLDSVLSEIELRVEVELAKA
4667 PF10742
(DUF2555)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2555) (Length=55)
KKDISAMTTADVQELANRLEEDDYSNAFEGLNDWHLLRAIAFQRPELVEPYIYLL
4668 PF10737
(GerPC)
 click to view
Estimated TM-score=0.51;
hard target.		 >Spore germination protein GerPC (Length=173)
IQQLERQLKEMQTEMNTMKQRPATTIERVEYKFDQLKIERLDGTLNIGLNPTDPNSVQNFEVSQTTPDIGMMQQEESAQL
MQQIRQNVDMYLTEEIPAVLEQLENQYGSRLDDTNRHHVIEDIRKQIDSRIHYYMSHIKKEENTPPKQYAEHIAEHVKRD
VIRAVEHFLEHIP
4669 PF10696
(DUF2501)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2501) (Length=79)
QKLVSATNTENVKNQLLDKLGLSSQQEKQQQTDYTQGLAGLLNTSDGKQLNLNSIGNTPLAEKVKTKACDVVLKQGANF
4670 PF10506
(MCC-bdg_PDZ)
 click to view
Estimated TM-score=0.51;
easy target.		 >PDZ domain of MCC-2 bdg protein for Usher syndrome (Length=64)
RLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLAL
4671 PF10496
(Syntaxin-18_N)
 click to view
Estimated TM-score=0.51;
hard target.		 >SNARE-complex protein Syntaxin-18 N-terminus (Length=89)
SDITPLWKASLKTVKIRSKTLGINQENAKNSILPHSRQKSEFVTKSKEVVNSITKLRDFLVEHRKAYINASSHLSLGVSR
MTDSERDQI
4672 PF10457
(MENTAL)
 click to view
Estimated TM-score=0.51;
hard target.		 >Cholesterol-capturing domain (Length=167)
SDVRRTFCLFVTFDLLFISLLWIIELNTNTGIRKNLEQEIVHYRFNTSFFDIFVLALFRFSGLLLGYAVLRLRHWWVIAV
TTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEEERWYLAAQAAVARGPPLFSGARSEGQ
FYSPPES
4673 PF10364
(NKWYS)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Putative capsular polysaccharide synthesis protein (Length=137)
IEGKKNDAIHRDMERTYQHLEFCFDHYINLNYFANWFDNELNKNFGIDVIKSDIDNNEPFYLFKNKKTEVMLIKCEHLNK
LDSDIAKFLNVDGFILKNSNEAKNKWYSNIYSHFKDTYDFSKLFYMYDLPLYRHLYS
4674 PF10332
(DUF2418)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF2418) (Length=105)
RDVWELAVWDPLPVSLQLFSLFSPGHVLVYMLFLPLENLDPRPSVTVFNCLALQVILSVQMLFLQSRFSQQIKDTAIIHK
EVLHEYDTKFVHPRLHPLVRDVGTQ
4675 PF10172
(DDA1)
 click to view
Estimated TM-score=0.51;
hard target.		 >Det1 complexing ubiquitin ligase (Length=63)
DFLKGLPSYNQTNFTRFHSDSGVKTTSRRPQVYLPTTDHPSEQVITTEKTNILLRYLHQQWDR
4676 PF10164
(DUF2367)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Uncharacterized conserved protein (DUF2367) (Length=107)
PSYGTIPAAQVGFQPPPPYPYPAAPGFSGGPPPASVQPPYSSTYTIIQQPATTSVVVVGGCPACRVGVLEDDFTCLGILC
AIVFFPIGILFCLALRQRRCPNCGATF
4677 PF10011
(DUF2254)
 click to view
Estimated TM-score=0.51;
hard target.		 >Predicted membrane protein (DUF2254) (Length=376)
SSYWFVPTLMAASAIALAFTMLTLDRAGKSGPIEKLAWIYTGGPDGARTLLSTIAGSMITVAGTAFSITIVALTLASSQF
GPRLLRNFMQDTGNQVVLGTFIATFIYCLLVLRTVRGDDYNVFVPQISVTVGIVLAIASIGVLIYFIHHASTSIQAWHVI
TEVGSDLDKAIDRLFPQKIGYGGSGEKRRWVEEIPVGFDREASPILATSSGYLQAIDNDKLMKIAQSKDLLVRLKHRPGK
FVVQGSELVRVWPGERVNKTLSQQLNEAFILGKQRTEQQDVEFCVNQLVEVAIRAISPAVNDPFTAIRCIDQLSAGLCRL
AEREFPSPYRYDDDNNLRVIVDPVTFAKLTDDAFNQIRQYSKPDVAVRIRMLEAIA
4678 PF10001
(DUF2242)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Uncharacterized protein conserved in bacteria (DUF2242) (Length=121)
CEAARRTLLSQGYIIKQAKADLVDGHKHFQPDQDTHVEIEFHVVCAPNDKDGKSSTLFVSATQDRYALKKTNNSASVGLS
VLGSVSLPIGSTSDSLVKVASETIPAGRFYDRFFGLIEHYL
4679 PF09999
(DUF2240)
 click to view
Estimated TM-score=0.51;
hard target.		 >Uncharacterized protein conserved in archaea (DUF2240) (Length=135)
XVAAPFKARAQDRLGQGEFVVALSLEREWFSPDQAKRLVDVALGRGLLASEDGDLVPQFDPAEVTVPEGFTPDESVLREQ
STFESALDAVVAAGVEKQRAVAAINERQRALAVTIEAAAVLYAREQGVAVDRLAV
4680 PF09991
(DUF2232)
 click to view
Estimated TM-score=0.51;
hard target.		 >Predicted membrane protein (DUF2232) (Length=287)
AIYAILLLISMYVPILGTVVTFALPLPFILLTLRHRLSNVIVIFVAALLITVIVGQPLSLIKTVMFGLIGVVLGYMYKKE
KKPVEILIAGTLAYLIGILLIYVASIKFFNIDLMKQMQNMFSESMAQSEKIVNAAGMPVSKEQKELFAQMSDILQTLFPS
ILVLVSVCFSWITLILSGSVLRKLKYDVTPWPKFKDIQLPKSIIWYYVICILLATFIKVEPTSYLHMVFSNLNVIFALLL
VLQGLTFITFLAHRKGFTKGVPIISFIACMFIPMLFPLVTILGIIDL
4681 PF09875
(DUF2102)
 click to view
Estimated TM-score=0.51;
hard target.		 >Uncharacterized protein conserved in archaea (DUF2102) (Length=103)
YIVISSDKVLPSDAAMKIYESESPVTVKETCFGLIVSGAKNDVQTVVEEIRQLDKNHIFVKDRGFPPGDERRCRASRGGG
PRPGFHFLREEVEMLPAIGAALD
4682 PF09777
(OSTMP1)
 click to view
Estimated TM-score=0.51;
hard target.		 >Osteopetrosis-associated transmembrane protein 1 precursor (Length=244)
CRRLLTAFAEGSATLSGCLARRARPVRLCQACGGLYRSLLTQYGDIARAVGNSSESHNCAKSILTSDRLQVVVTLSSFFN
DTWEAANCANCIKNNSEGLSNSTQEFMDLFNKSLACFEHNLQGQAMDLSPNNYTEVCKNCNGTYKKLNDLYNKLQRLNRH
GDESGHSAHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSSFILFLPVVFYLSSFLHSKQKKRILILPKRIQSNA
SLVN
4683 PF09767
(DUF2053)
 click to view
Estimated TM-score=0.51;
easy target.		 >Predicted membrane protein (DUF2053) (Length=149)
TLFHFGNCFALAYFPYFITYKCSGLSEYNAFWRCVQAGATYLFVQLCKMLFLATFFPTWEGGAGVYDFVGEFMKSTVDLA
DLLGLHLVMSRNAGKGEYKIMVAAMGWATAELVMSRFLPLWVGARGIEFDWKYIQMSFDSNISLVHYIX
4684 PF09740
(DUF2043)
 click to view
Estimated TM-score=0.51;
hard target.		 >Uncharacterized conserved protein (DUF2043) (Length=105)
EIPILSFGLDLKYWGEDDVVPAEVPRNNADCHRFWRPSDESCCTSRDSAEVYRARVITFVGPGLKATRRCRAPLKNGELC
SRMDFRRCPLHGNIIDRDEMGYPID
4685 PF09538
(FYDLN_acid)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (FYDLN_acid) (Length=108)
MAKPELGTKRLCPSCGAKYYDLNRNPITCPKCGTLFDIVSSSRAAKASRVVQQEDEDEDEEDLVAPELVSLEEADAEVEG
DIVPDLGDDDEAAIDDDADDDVFIEDEE
4686 PF09072
(TMA7)
 click to view
Estimated TM-score=0.51;
hard target.		 >Translation machinery associated TMA7 (Length=62)
GREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELRAKAAGKGPLATGGIKKSGKK
4687 PF08983
(DUF1856)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF1856) (Length=47)
KFNKEDSDSVSRRQTSYTHNRSPTNSMGIWKDSPKSSKSIKFIPVST
4688 PF08845
(SymE_toxin)
 click to view
Estimated TM-score=0.51;
easy target.		 >Toxin SymE, type I toxin-antitoxin system (Length=51)
ERFTRVGYRPIKGNHNTPAINIAGQWLKDAGFTTGQPLKLRIMPGCIVITT
4689 PF08811
(DUF1800)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF1800) (Length=440)
TLRRITFGPLPNEVARARAIGLEAFILEQLNPESIPEPDILAPFDFETLEMNAGELLRVDPPGRPIGELMGATLARAVFS
PRQLYEKMVVFWSDHFNIYIRKGIERALKPVDDRLVIRPHALGRFHDLLSASAHSPAMLYYLDNASSTKEKPNENYAREL
LELHTLGVDGGYTHQDIVEVARALTGWSITRPRRFFGGGGEFVFRPRLHDTGPKTILGQSFPAGQGVEDGEQLLDLLSHH
PSTARFISTKLVRRFVADEPPEDLVTRATQTFQETDGDIAEVMRTILTSDELRASLGGKLKRPFEYLVSALRQTQAEIEP
NRALFRYLTMMGQPLFHWPTPDGYPDVAAAWMGTGSLLARWNFALALAFNTIPGVRVDWDVLAGEASAPEGALDTLSDRF
LGAPLPEEARSLILDFLNTLDAGFVLPALGALLLASPYFQ
4690 PF08469
(NPHI_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Nucleoside triphosphatase I C-terminal (Length=148)
HIFTPEERRYVNVHFIIARLSNGDSTVDEDLLDIIRTKSKEFTQLFKVLKESSIEWIYEHHKNFSPIDDESGWTSLISRA
IDMNSKPREIIHVAEGQNIWYSHSNRLITIYRGFKTEDGKIYDTDGNFIQNMPDNPIIKIHNDKLVYL
4691 PF08188
(Protamine_3)
 click to view
Estimated TM-score=0.51;
hard target.		 >Spermatozal protamine family (Length=48)
ARRRHSMKKKRKSVRRRKTRKNQRKRKNSLGRSFKAHGFLKQPPRFRP
4692 PF08175
(SspO)
 click to view
Estimated TM-score=0.51;
hard target.		 >Small acid-soluble spore protein O family (Length=48)
AKRKANHVIPGMNAAKAQGMGAGYNEEFSNEPLTEAQRQNNKKRKKNQ
4693 PF08157
(NUC129)
 click to view
Estimated TM-score=0.51;
hard target.		 >NUC129 domain (Length=63)
YTAMHLKDQSLTGLHQQTAKDFVYSHLYGPGTNRTSANEFFSLANKKDPVKKAAVQFVDKSWG
4694 PF08101
(DUF1708)
 click to view
Estimated TM-score=0.51;
easy target.		 >Domain of unknown function (DUF1708) (Length=397)
EVAPDEVQELIHVCTQELKSRALDTPFLLLPFRPGSDATSARSFIKSFFRDAYEGGGSYRGEGLRAELRLTEPMVLCSIM
KWCWSRLPGGVVTWDVYELFRVGEQDSGMAKHAFDTFVPISVDSEARKQIIIDFFDLLAAISARGKTNGLGGRKLSRMAG
WWAFEHPDSGKGFDGGYKSWTGAADATSHLFFAYLRSLAPEDMSLTGINTLPRSLQALLNQTEYPPEPPTLMRTTTTKVV
MIVDTVSPTPFALLRRAKHFEYRDDDRVLQKFSHYDDPIRALTEECQRPNVLPTLRGQDGTTNHSVMGGFPFVWVLPPIG
EVTRVQSSQSHLRLGEDDLEPGELASVSHVDLDETFWWVWMTSLAIEEPNERKAVFGRCALLETNISGGKWLILEEQ
4695 PF07956
(DUF1690)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of Unknown function (DUF1690) (Length=134)
WKGSAPTSVSQDMLDSLQSSTETDASRAQTLELQIQARVAEELKRLQAKEDAKLKEAEEKLSELTDKDEKDSPSRQTVSK
EVEALRAKLEGRKKVRELPDTVESARSEVIRCLRENDRRPLDCWKEVEKFKDEV
4696 PF07937
(DUF1686)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF1686) (Length=179)
VGVSWNTALYSVAVAGIIAYQLWVLSRSYRTEGVSGMLRQDWSAIGCMVPMMVGLPHAGMIRSGVYSLTMAASGAVMLYV
QDAMRSGMSLKQVCAIGGGNLVLAVACLAGSKKLFMPGACGLSQRICVGLVVFVALLVVVSYAEKGRSGGKKYSSTVGSV
VFVMTLAAVTLGSWVCGRD
4697 PF07898
(DUF1676)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF1676) (Length=156)
NCDDSYSLTCLKLDVVSWVDKLSENEDISVLPGVSIVRENSSAKVTTSDIVTELAREFPDDPNARLDAFMLKKVSGFLNN
HSIKLNLWNAAQDESAGTARKKDKKGGDGMGMILAAGAMMKGMLMALALGGIAALAGKALMTGLISLLLSAIIGLK
4698 PF07777
(MFMR)
 click to view
Estimated TM-score=0.51;
very hard target.		 >G-box binding protein MFMR (Length=93)
MGSSDDVKSPKSEKTSPPATEHNGVHMYPDWAGIQAYYGPRVALPPYFNSAIAPRHPPPPYMWGPPQPMVPPYGAPYGAI
YAPGGVYAHPAIP
4699 PF07600
(DUF1564)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF1564) (Length=166)
MDILLFDSNQKIQSTLIENAVGTDSLLVPNVYWDRLNLKEKKALRGKLPFLLRKYSKQIASMKRLHNRAGKIKYNRSVGK
MKKLSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLEDLGVGDSTVETLNRGVPSFHWTYKMIWKINRRQNLISRELEF
EPNPMT
4700 PF07577
(DUF1547)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of Unknown Function (DUF1547) (Length=56)
DILAAVRKHLDKVYPGENGGSTEGPLPANQNLGKVISDMEQTGTAEETIVSPGNGS

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