SEQ2FUN

Download tab-separated tables

All RNAs: rna.tsv.gz

All ligand-RNA interactions: interaction.tsv.gz

All DNAs that interact with RNAs: dna.tsv.gz

All proteins that interact with RNAs: protein.tsv.gz

All small molecule ligands (regular ligands and metal ions) that interact with RNAs: ligand.tsv.gz

Match to ATtRACT motifs for protein binding: attract_fimo.tsv.gz

Full GO terms for each RNA, including the parent terms: parent.tsv.gz

Documentation for the above tables: readme.md

Download FASTA format sequences

Molecule type	All sequences	Non-redundant sequences (clustered at 100% sequence identity cutoff)	Members of each cluster
RNA (length ≥10)	rna.fasta	rna_nr.fasta	rna.tsv.gz
RNA fragment (length ≤9)	fragment.fasta
DNA	dna.fasta	dna_nr.fasta	dna.tsv.gz
Protein	protein.fasta	protein_nr.fasta	protein.tsv.gz

Download PDB format structures

All RNA chains: chain.tar

All interaction partners (i.e., ligands) for each RNA chain: ligand.tar

Download source code

The source code for database curation and web interface display: https://github.com/kad-ecoli/furna