FURNA

Download all results in tab-seperated text for 1853 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	1a9n:Q (2.38Å)	24	N/A	URS000080E0B0	N/A	Homo sapiens 9606	9716128	504	Assembly1 protein:B:6~99 1,4~13,15~17
2	1a9n:R (2.38Å)	24	N/A	URS000080E0B0	N/A	Homo sapiens 9606	9716128	504	Assembly2 protein:D:6~98 5~13,15~17
3	1b7f:P (2.6Å)	12	N/A	URS000080DF5A	N/A	Drosophila melanogaster 7227	10217141	398 1356	Assembly1 protein:A:123~289 3~12
4	1b7f:Q (2.6Å)	12	N/A	URS000080DF5A	N/A	Drosophila melanogaster 7227	10217141	398 1356	Assembly2 protein:B:123~289 3~6,8~12
5	1d4r:A (2.0Å)	29	N/A	URS000080DDD1	N/A	Homo sapiens 9606	10574798	s72	Assembly1 rna:B:1~29 1~14,16~28
6	1d4r:B (2.0Å)	29	N/A	URS000080DDD1	N/A	Homo sapiens 9606	10574798	s72	Assembly1 rna:A:1~29 1~13,16~28
7	1d4r:C (2.0Å)	29	N/A	URS000080DDD1	N/A	Homo sapiens 9606	10574798	s72	Assembly2 rna:C-2:1~29 2~28
8	1dz5:C	22	N/A	URS000080DE18	N/A	Homo sapiens 9606	10742179	518 346 M319_0.6	Assembly1 protein:A:1~101 24~25 protein:B:1~101 13~19 rna:D:34~55 8~13,20~29
9	1dz5:D	22	N/A	URS000080DE18	N/A	Homo sapiens 9606	10742179	518 346 M319_0.6	Assembly1 protein:A:1~101 40~45 protein:B:1~101 50~51 rna:C:8~29 34~39,46~55
10	1e7k:C (2.9Å)	17	N/A	URS000080E042	N/A	Homo sapiens 9606	11163207 10545122	708 705 52 183 123 125	Assembly1 protein:A:4~128 29~32,42~43
11	1e7k:D (2.9Å)	17	N/A	URS000080E042	N/A	Homo sapiens 9606	11163207 10545122	708 705 52 183 123 125	Assembly2 protein:B:6~128 29~32,42~43
12	1e8o:E (3.2Å)	50	GO:0006617 (P) SRP-dependent cotransla... GO:0035195 (P) miRNA-mediated post-tra... GO:0005786 (C) signal recognition part... GO:0016442 (C) RISC complex	URS000080E0CE	RF00017 RF04277	Homo sapiens 9606	11089964	M054_0.6 M109_0.6 M044_0.6 445 M151_0.6	Assembly1 protein:A:2~75 112~114 protein:B:2~95 113,135~136 protein:C:5~75 121~124 protein:D:2~95 119,121,123~129
13	1e8s:C (4.0Å)	86	GO:0006617 (P) SRP-dependent cotransla... GO:0035195 (P) miRNA-mediated post-tra... GO:0005786 (C) signal recognition part... GO:0016442 (C) RISC complex	URS000080DFFF	RF00017 RF04277	Homo sapiens 9606	11089964	M054_0.6 M109_0.6 445 M151_0.6 M044_0.6 509
14	1ei2:A	25	N/A	URS000080DF33	N/A	Homo sapiens 9606	10637322	M325_0.6 M175_0.6	Assembly1 NMY:A:26 5~8,14,17~18
15	1jid:B (1.8Å)	29	N/A	URS000080DDD1	N/A	Homo sapiens 9606	11641499	s72	Assembly1 protein:A:5~118 141~143,147~151 MG:B:301 142,154~155 MG:B:302 152~153
16	1l1w:A	29	N/A	URS000080E199	N/A	Homo sapiens 9606	12153712	s72
17	1l9a:B (2.9Å)	126	GO:0006617 (P) SRP-dependent cotransla... GO:0005786 (C) signal recognition part...	URS000080DE1E	RF00017 RF01856	Homo sapiens 9606	12086622	1164 M168_0.6 M347_0.6 1373 1212 s55 110 s71 s72	Assembly1 protein:A:1~87 140~144,146~147,149~151,195~19 8,204~205 MG:B:110 164~165 MG:B:111 226~227 MG:B:242 170,172 MG:B:243 171~172 MG:B:244 227~228 MG:B:246 166~167 MG:B:249 208~209
18	1lmv:B	10	N/A	URS000080E2FE	N/A	Saccharomyces cerevisiae 4932	12426583	403 168 387	Assembly1 rna:A:1~9 1~10
19	1lpw:B	10	N/A	URS000080E2FE	N/A	Saccharomyces cerevisiae 4932	12426583	403 168 387	Assembly1 rna:A:1~9 1~10
20	1mfq:A (3.1Å)	128	GO:0006617 (P) SRP-dependent cotransla... GO:0005786 (C) signal recognition part...	URS000080DE1E	RF00017 RF01856	Homo sapiens 9606	12244299	1164 M168_0.6 M347_0.6 1373 1212 s55 110 s71 s72	Assembly1 protein:B:14~120 141~143,147~151,195~198,203~20 4 protein:C:323~438 184,192~195,207~208 MG:A:501 192~194 MG:A:502 183,185 MG:A:505 116~117
21	1na2:A	30	N/A	URS000080DF2D	N/A	Homo sapiens 9606	12525685	58 1188 1125 122 s66 s65
22	1qc8:A	25	N/A	URS000080DF33	N/A	Homo sapiens 9606	10393977	M325_0.6 M175_0.6
23	1un6:E (3.1Å)	61	N/A	URS000080E224	N/A	Xenopus laevis 8355	14603324 10926492	463	Assembly1 protein:C:104~190 7,10~11,14,68~70,75,98~99
24	1un6:F (3.1Å)	61	N/A	URS000080E224	N/A	Xenopus laevis 8355	14603324 10926492	463	Assembly2 protein:B:104~189 10~11,13~14,68~69,75,98~99 protein:D:133~190 8,112~113
25	1ymo:A	47	N/A	URS000080DFA1	N/A	Homo sapiens 9606	15749017	58 1188 1125 414 122 s66 s65
26	2euy:A	34	N/A	URS000080E1BE	N/A	Homo sapiens 9606	16373493	993
27	2kx8:A	42	N/A	URS000080E360	RF00100	Homo sapiens 9606	20816986	335 s100 991 1368	Assembly1 ARG:A:392 303,319~320
28	2l2j:A	42	N/A	URS000080E153	N/A	Homo sapiens 9606	20946981	872 815 926 970
29	2l2k:A	42	N/A	URS000080E153	N/A	Homo sapiens 9606	20946981	872 815 926 970	Assembly1 protein:B:43~113 6~9,14~16,29~31,38~39
30	2lkr:A	111	GO:0030621 (F) U4 snRNA binding GO:0045131 (F) pre-mRNA branch point b... GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000348 (P) mRNA branch site recogn... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... GO:0005686 (C) U2 snRNP	URS000080E147	RF00026 RF00004	Saccharomyces cerevisiae 4932	22328579	383

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.