| # | PDB (Resolution) |
Length | EC number & GO term |
RNAcentral | Rfam | Taxon | PubMed | ATtRACT motif |
Ligand & binding nucleotides |
|---|---|---|---|---|---|---|---|---|---|
| 4201 |
5xy3:4 (3.2Å) |
154 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000527ECE | RF00002 | Trichomonas vaginalis 5722 |
28809395 | Assembly1 rna:1:2~2755 1~3,5~14,16~23,25~38,41~42,53~ 54,103,105,108,112~113,141~153 ,155~160 protein:C:3~370 22~23,27~29 protein:G:42~238 152~159 protein:L:2~186 30~32 protein:N:2~204 144~146 protein:P:3~158 4~5,14,16 protein:X:38~138 60~61,98,112,121 protein:Y:2~135 23~25,70,72~75,84~85 protein:h:2~123 36~39,50,61,64~67,79,86~87,96~ 97 protein:j:2~79 33,35~37,42~44,58~59,93~94,103 ,110 protein:l:2~51 47,51~54,75~76,111~112 |
|
| 4202 |
5xyi:2 (3.35Å) |
1490 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000BC4699 | RF01960 | Trichomonas vaginalis 5722 |
28809395 | Assembly1 protein:A:11~219 860,873,889,1101~1102,1104,113 0~1133 protein:B:19~238 694~695,704~706,716,740,750~75 3,767~768,864~865,874~876 protein:C:47~264 1~5,9~10,12~14,894,906~907,954 ~955,1099,1106~1109,1441 protein:D:5~214 501,1083~1087,1138~1143,1229~1 230,1232~1233,1245~1247,1322~1 323 protein:E:2~248 81~84,101,108~110,112,184~186, 193~195,228~232,312~316,329,33 1,377~381,385,600~601,604~606, 621,633~634,644 protein:F:1~193 971,974~975,1214,1281~1283,133 3~1336,1341~1342,1378~1379,138 9,1392~1394,1415~1419,1421 protein:H:2~165 560~561,563~565,575~580,590,65 5,676~680 protein:I:2~194 94~95,107,177~179,199,201,203, 233,250~253,258~268,271,277,28 4~285,316~317,322~324,327~331, 1481~1484 protein:J:5~166 2~3,20~23,402~406,409~410,435~ 436,455,476,514~516,609~611,61 3,615~616,618~619,634 protein:K:1~91 1025~1028,1041,1065,1074,1244 protein:L:4~155 103~104,188~191,236~240,254~25 8,265~266,268,276~279,281,303~ 304,532~533,552,554,656 protein:M:1~118 1036~1038 protein:N:2~151 548~551,657~658,679~682,684,68 6~689,697~699,759~760,770~773, 775~776,778~783,785~787,839,85 4~855,881~882 protein:O:25~159 705~707,715~716,719~727,737~73 8,747~749,809~811,826~827,1549 ,1565,1567~1569 protein:P:11~131 987~989,991,1019,1049~1051,126 2~1264,1266,1268~1270,1355~135 7,1359~1364 protein:Q:2~140 1000,1003,1147~1148,1160~1161, 1174~1175,1185~1187,1220,1226~ 1227,1274~1276,1292~1293,1386~ 1387,1389~1392,1409~1412,1414~ 1416 protein:R:3~120 1121,1126,1128,1142,1193~1199, 1209~1211,1222~1224 protein:S:9~143 981~982,984~986,1267~1272,1311 ,1341,1346,1352~1355,1370~1373 protein:T:2~147 1167~1169,1172~1176,1277~1278, 1286~1290,1306~1312,1329~1330, 1332,1336,1349~1350,1370,1396~ 1397,1407 protein:U:21~121 1002,1005~1007,1088~1090,1144~ 1145,1154~1155,1157,1188~1190, 1238,1297,1324,1409~1411 protein:W:2~130 534,557~560,595~597,647,649~65 0,681~683,787,854~856,858~859, 904~905,907,909~911 protein:X:3~142 18,26~29,242~243,281,289,365~3 66,487~494,496~498,506,520~522 ,531~534,555,910~914,917,940~9 41,945,1522,1535 protein:Y:5~117 152,376,445~446,448,454~456,61 5,623,625~628 protein:Z:18~90 1337,1340~1342 protein:a:2~102 750,752~756,762~764,850,886,89 9~900,951~952,961~962,1433~143 5,1546,1569~1577 protein:b:2~83 684,690~692,777~779,869~870,87 9~880 protein:c:7~67 970,1422~1423,1425 protein:d:5~56 1006~1008,1012~1014,1025,1088, 1241~1243,1261~1262,1297,1299, 1361,1400~1403 protein:e:8~49 407~408,410,427~428,467,489,50 6~509,515 protein:g:21~332 1149,1151,1193~1194,1200~1201 protein:n:2~25 924~925,927,934~936,1459~1461, 1553~1555,1563~1564 |
|
| 4203 |
5xym:A (3.08Å) |
2665 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00003A7753 | RF02541 | Mycolicibacterium smegmatis MC2 155 246196 |
28875450 | Assembly1 protein:0:2~56 15~16,607~608,674,1380~1382,13 84,2242~2244,2247~2249,2272~22 73,2281~2284,2839,2841~2842,30 39~3040,3106,3108,3110~3111 protein:1:6~52 740,2511~2513,2572,2574~2575,2 597~2599,2626 protein:2:2~47 53,124~126,212~213,549~550,555 ~560,800~802,804~805,870,888~8 89,906,1427,1485~1486,1496,183 3~1834,1841 protein:3:2~64 244~246,249~250,252~257,686,68 8,726~728,747~748,952,2577,258 6,2588~2590,2610,2618~2621,264 5~2648 protein:4:1~37 1152,1245~1246,2692~2694,2705, 2753~2755,2766,2969~2970,2980~ 2984 protein:C:2~274 808~811,824,846~847,882,891~89 2,897~900,902,1649~1650,1713~1 714,1723~1725,1788~1793,1916,2 008~2012,2017~2020,2023~2026,2 032~2041,2043~2047,2061~2062,2 064~2065,2128~2129,2198~2199,2 204,2299~2301,2311,2430,2448~2 449,2466,2817~2818,2824~2827 protein:D:3~214 862,1251,1875~1878,1891,1894,1 896,2220~2221,2224~2226,2251~2 252,2277~2280,2738~2740,2798~2 799,2801~2802,2805~2807,2845~2 849,2860~2865,2906~2909,2951,2 956~2960,2998~3001,3011~3013,3 034~3035,3045~3047,3054~3055 protein:E:2~209 37~38,405~408,533~535,539~540, 542~543,560~561,683~685,687,69 5~696,702~704,709,711~714,716, 777~778,789~794,919,1320,1322, 1362~1363,1366,1373~1375,2286~ 2287,2671~2672 protein:F:9~184 2525,2529~2532,2534~2535,2537~ 2542 protein:G:13~176 2753,2756~2758,2885~2886,2893~ 2895,2970~2976,2984~2986 protein:H:1~39 2319~2320,2424~2425 protein:J:2~147 6~8,618~619,628,652~654,1116,1 126~1128,1130,1132~1134,1143,1 252~1253,1258~1263,2267,2742,2 866~2867,2869,2995,3007 protein:K:1~122 1885~1888,2178~2179,2222~2223, 2774~2775,2788~2789,2901~2903, 2910~2911,2953,2955 protein:L:3~146 247,252,254~255,661~663,682,69 3~694,717~718,722,724,727~731, 733~734,768~769,780~781,922~92 6,928~931,943~944,949~951,1062 ~1063,1308,1321,1362~1363,1368 ,2586~2587,2619~2621,2632~2633 ,2641~2644,2655~2656 protein:M:1~135 989~990,992,1025~1030,1072,107 4~1079,1150,2478,2502~2505,269 4,2696,2710~2712,2722~2723 protein:N:2~117 1393~1394,1396~1397,1405,1412~ 1413,1677,1679,1870~1874,2228~ 2229,2236,2916~2917,2928~2929, 2933~2935,3041,3062~3064,3074, 3093~3094,3096,3104~3106 protein:O:9~127 2519~2522,2561~2562,2603~2605 protein:P:2~112 1973~1974,2909~2912,2945~2946, 3069~3073,3099 protein:Q:2~125 17~20,29~30,536~538,540,622~62 6,654~656,658~659,675~679,1111 ,1113~1119,1130~1133,1135,1271 ~1276,1278,1315~1316,1333~1334 ,1345,1366,1368~1370,2245~2248 protein:R:3~102 659~660,662,666~667,932~933,10 95,1113~1115,1117,1284~1285,13 05~1306,1340~1342 protein:S:7~117 23~26,577~578,580~581,583~585, 598,607~608,610,865~866,869,13 84,1389,1440~1441,1443,1835~18 36,2236~2241 protein:T:4~96 58~59,64,71,144~145,1430,1454, 1456~1460,1510,1517,1818~1820, 1822 protein:U:1~105 83~86,383~384,386,393~394,412~ 414,420~422,571 protein:V:7~183 993~995,1160~1161 protein:W:8~83 761~762,974~976,1040~1041,2488 ~2490,2497~2499,2504~2506,2556 ~2561,2563,2579~2584,2590~2592 ,2613~2614 protein:X:2~63 167~168,190,202~203,463,470~47 2,478,486~489,491,1482~1483,23 05~2306,2316,2318,2425~2427,24 44~2445,2457~2459,2660 protein:Y:6~66 61,72,76~78,96~97,111~112 protein:Z:2~59 967~969,1045~1047,1088~1089,10 91,1109~1110,1121,1279,1302 protein:a:2~24 1068~1069,1081,1099~1100,1103, 1105~1107,1122~1123,1147,1255, 2255~2256,2258,2683~2684,2716 rna:B:2~117 979~981,1033~1036 MG:A:3204 541,544 MG:A:3210 673~675 MG:A:3213 851,879 MG:A:3215 869,1835 MG:A:3216 901~902,2816 MG:A:3217 902,2815 MG:A:3220 945,2656~2657 MG:A:3223 1068,1082~1083 MG:A:3224 1120,1275 MG:A:3225 1386,2233 MG:A:3226 1387,2232 MG:A:3227 1389~1390,1868~1869 MG:A:3228 1432~1433,1450 MG:A:3230 1476,1489 MG:A:3231 1512,1825 MG:A:3232 1513,1824 MG:A:3234 1891~1892 MG:A:3237 2195,2819 MG:A:3242 2288,2729 MG:A:3246 2495~2496 MG:A:3248 2536~2537 MG:A:3252 2938,2941 MG:A:3255 502,2634 MG:A:3257 936,1305 MG:A:3260 1477~1478 MG:A:3264 671,2728,2730~2731 MG:A:3267 2724~2726 MG:A:3268 665,2675,2726 MG:A:3269 2000,2002~2003 MG:A:3270 848,879 MG:A:3271 858,2003~2004 MG:A:3272 944,2654~2656 MG:A:3274 2800~2802 MG:A:3275 1460,1823 MG:A:3276 803~804 MG:A:3277 1890~1892,2777 MG:A:3281 1383,2842 MG:A:3282 905,908 MG:A:3283 197,199 MG:A:3284 1432~1433,1450 MG:A:3286 600~602 MG:A:3298 621,2263 MG:A:3299 671,2730 MG:A:3301 1367~1368 MG:A:3302 796,894,2298 MG:A:3305 855,1842~1843 MG:A:3310 1069~1070 MG:A:3312 1144,1146~1147 MG:A:3313 1134,1265 MG:A:3321 1512~1513,1515,1823~1824 MG:A:3323 1875,2233 MG:A:3324 1885~1886 MG:A:3337 2803~2804 MG:A:3338 2809~2810 MG:A:3341 2803,2808,2837 MG:A:3343 2909,2948 MG:A:3345 2928,2930 |
|
| 4204 |
5xym:B (3.08Å) |
116 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000047BBB1 | RF00001 | Mycolicibacterium smegmatis MC2 155 246196 |
28875450 | Assembly1 rna:A:6~3115 12,79~81,95,97~98 protein:F:9~184 43~44,46,55~58 protein:O:9~127 7~9,28~31,47~53,60,112 protein:V:7~183 75~78,96,101~102 protein:W:8~83 12~13 protein:Z:2~59 83~84 protein:a:2~24 87~88 |
|
| 4205 |
5xyu:A (3.45Å) |
1379 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001AF2F7 | RF00177 | Mycolicibacterium smegmatis MC2 155 246196 |
28875450 | Assembly1 protein:C:2~203 1035~1041,1086~1089,1091~1093, 1170~1171,1174,1185,1187,1259 protein:D:2~200 12,401~404,406~408,429~430,436 ~439,469,490,523~527,599~600,6 02 protein:E:35~193 10~13,19~23,539~540,846,903~90 5,1050~1051,1053~1054,1058,106 0~1062,1380 protein:F:1~85 716~718 protein:G:2~153 914~915,917,921,1221,1271~1274 ,1280,1328,1333,1355,1357~1360 ,1362~1363 protein:H:2~132 566~567,569~570,578~580,620,62 2~624,633,735,803~808,857~860 protein:I:25~148 949,1097~1099,1110~1111,1128~1 130,1159,1167~1169,1214,1230~1 232,1324~1325,1327~1332,1350~1 356 protein:J:4~101 946,951,955,1039,1041,1095,110 4~1106,1131~1133,1179~1180,123 5,1260~1261,1349~1351 protein:K:24~138 655~657,663~665,668~672,675,68 6~688,696,698,757~758,760,776, 1507 protein:L:2~124 37~41,363,481~483,498~503,507, 509,518~519,531~533,542~544,54 7~548,862~863,893,1475 protein:M:2~113 929~932,934,1206~1209,1284,128 8~1292,1304,1310~1313 protein:N:2~61 956~958,961~965,976~977,1028~1 029,1040,1094,1168~1169,1183~1 184,1197~1198,1200,1298~1299,1 340~1342,1351 protein:O:2~87 560~561,636~637,639,647~648,70 8,710,719~722,730,732~734,788~ 789 protein:P:2~96 47~48,106~108,132~134,228~230, 309~310,325,375~377,390~393,44 9~450,587~588,604~607 protein:Q:5~97 123~124,126~127,136~137,193~19 5,200,225~226,234~235,237,253~ 255,264~265,276~277,280,544,56 6,577,616~617,625 protein:R:27~81 643,645,653~654,699~701,713~71 6 protein:S:4~82 940~941,968,995,997~998,1201~1 204,1206,1208,1295~1296,1300~1 304 protein:T:3~85 100~101,103~104,129,173,175,18 2~184,206,208~209,259~263,322~ 324,332~333,1421~1423,1442~144 3 protein:U:2~26 551~553,795,869,872~873,884~88 5,897~899,1377,1388,1470~1471, 1483~1484,1493~1495,1500,1502~ 1504,1513 MG:A:1607 926~927 MG:A:1616 112~113,289 MG:A:1618 299,538 MG:A:1622 556,739~740 MG:A:1625 762,774 MG:A:1627 1034,1178~1179 MG:A:1628 959,1205 MG:A:1633 1483~1484,1489 MG:A:1634 1484,1489,1492 MG:A:1637 552,554 MG:A:1641 1034,1178 |
|
| 4206 |
5y85:B (2.001Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly1 rna:A:1~18 1~6,13,15~16,18,38~43,45~50 MG:B:101 42~43 MG:B:102 43~44 MG:B:105 7,38 |
|
| 4207 |
5y85:D (2.001Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly2 rna:C:1~18 1~6,13,15~16,38~43,45~50 MG:D:103 7,38 MG:D:108 43~44 MG:D:109 42~43 |
|
| 4208 |
5y87:B (2.132Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly1 rna:A:1~18 1~6,13,15~16,18,38~43,45~50 MN:B:102 42~43 MN:B:103 43~44 MN:B:105 14,45 MN:B:107 7,38 |
|
| 4209 |
5y87:D (2.132Å) |
50 | GO:0003824 (F) catalytic activity | URS0000CBFF28 | RF02681 | metagenome 256318 |
29081514 | Assembly2 rna:C:1~18 1~6,13,15~16,18,38~43,45~50 MN:D:102 7,38 MN:D:105 42~43 MN:D:106 43~44 |
|
| 4210 |
5y88:B (3.46Å) |
117 | GO:0000386 (F) second spliceosomal tra... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000245 (P) spliceosomal complex as... GO:0000350 (P) generation of catalytic... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0034403 (P) alignment of 3' and 5' ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000053F313 | RF00020 | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 protein:A:127~2085 32~36,40~41,76~77,79~84,86,94~ 97,100~105,111,113,121 protein:C:67~1008 43~45,75 protein:L:1~157 123~124 protein:P:5~175 88,107~109 protein:Q:30~247 110~111 protein:a:4~102 171~172,174 protein:b:10~92 168,175 protein:c:12~83 167~168,174~175 protein:d:2~76 169~170 protein:f:1~109 165,171~172,174,176~177 protein:g:15~108 165~167,173~174,176,179~180 rna:D:1~101 98~99 |
|
| 4211 |
5y88:D (3.46Å) |
101 | GO:0030621 (F) U4 snRNA binding GO:0017069 (F) snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000350 (P) generation of catalytic... GO:0000388 (P) spliceosome conformatio... GO:0000398 (P) mRNA splicing, via spli... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00006184A9 | RF00026 | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 protein:A:127~2085 31,35~36,43~44,61~63,69~73,75~ 76,78 protein:I:36~641 64~67,84~92 protein:J:9~587 51~55,66~67,85~86 protein:K:92~211 89,91~93 protein:L:1~157 1,25~30,35~36 protein:M:3~288 28~32,66 protein:N:1~261 34~42,44 protein:P:5~175 62~66,74,84 protein:Q:30~247 32,66,68 protein:S:51~73 1,21,23 rna:B:28~183 72~73,75 rna:E:1~504 45~51,79 rna:F:1~1120 53,55~62,88,93~101 MG:D:200 78,80 MG:D:204 61,77 |
|
| 4212 |
5y88:F (3.46Å) |
82 | GO:0045131 (F) pre-mRNA branch point b... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000348 (P) mRNA branch site recogn... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0005686 (C) U2 snRNP |
URS000023C730 | RF00004 | Saccharomyces cerevisiae S288C 559292 |
28919079 | Assembly1 protein:A:127~2085 19~25,27,31 protein:J:9~587 25,29 protein:K:92~211 4~5,9,13,15~19 protein:P:5~175 20~21 protein:p:29~111 1101,1104~1110,1113~1114 protein:h:6~102 116~117,119 protein:i:10~92 113,120 protein:j:12~83 112~113,119~120 protein:k:2~76 114~115 protein:l:4~85 115,1111 protein:m:1~109 110,116~117,119,121~122 protein:n:44~108 111~112,118~119,121 rna:D:1~101 4~13,17,21~23,26~29 rna:E:1~504 32~35,37~43 |
|
| 4213 |
5ylz:B (3.6Å) |
117 | GO:0000386 (F) second spliceosomal tra... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000245 (P) spliceosomal complex as... GO:0000350 (P) generation of catalytic... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0034403 (P) alignment of 3' and 5' ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000053F313 | RF00020 | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 32~36,40,76~77,80~86,95,100~10 1,103~105,111~113 protein:C:67~975 43~44,70,75~76 protein:L:1~157 123~124 protein:P:4~175 88,108~109 protein:R:2~28 92~93,102~103 protein:a:4~102 171~172,174 protein:b:10~92 168,175 protein:c:12~83 167~168,174~175 protein:d:2~76 169~170 protein:f:1~109 165,171~172,174,176~177 protein:g:15~108 165~167,173~174,176,179~180 rna:D:1~103 98~99 rna:E:-13~355 96~100 |
|
| 4214 |
5ylz:D (3.6Å) |
103 | GO:0030621 (F) U4 snRNA binding GO:0017069 (F) snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000350 (P) generation of catalytic... GO:0000388 (P) spliceosome conformatio... GO:0000398 (P) mRNA splicing, via spli... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00006184A9 | RF00026 | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 33,36,43,61~63,69~73,75~76,78 protein:I:36~622 65,67,84,86,88,90~92 protein:J:9~587 52~55,66~67 protein:K:98~211 89,92~93 protein:L:1~157 1,25~26,28~30,35~36 protein:T:51~454 1,21~22,48 protein:M:3~296 28~32,66 protein:N:1~261 34~41,44 protein:P:4~175 52,63,65~66,74,84~85 protein:Q:30~247 32,66~67 rna:B:28~183 72~73,75~76 rna:E:-13~355 45~51,58~60,77,79 rna:F:1~1120 53,55~62,88,92~103 MG:D:200 78,80 MG:D:201 59~60,80 MG:D:204 61,77 |
|
| 4215 |
5ylz:F (3.6Å) |
91 | GO:0045131 (F) pre-mRNA branch point b... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000348 (P) mRNA branch site recogn... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0005686 (C) U2 snRNP |
URS000023C730 | RF00004 | Saccharomyces cerevisiae S288C 559292 |
29153833 | Assembly1 protein:A:127~2085 19~25,27,30~32 protein:K:98~211 5,7,9,13,15~19 protein:P:4~175 20~21 protein:h:6~102 116~117,119 protein:i:10~92 113,120 protein:j:12~83 112~113,119~120 protein:k:2~76 114~115 protein:l:4~84 115,1111 protein:m:1~109 110,116~117,119,121~122 protein:n:44~108 111~112,118~119,121 protein:p:29~111 1101,1104~1110,1113~1114 rna:D:1~103 1~13,17,21~23,26~30 rna:E:-13~355 32~47 |
|
| 4216 |
5yyn:B (3.0Å) |
63 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000316653 | RF00005 | Geobacillus stearothermophilus 1422 |
N/A | Assembly1 protein:A:1~577 902~906,908,913~917,919~921,92 5,956~957,972 |
|
| 4217 |
5yyn:D (3.0Å) |
64 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000316653 | RF00005 | Geobacillus stearothermophilus 1422 |
N/A | Assembly2 protein:C:1~577 903~905,913~917,919~920,925,95 6~957,972~973 |
|
| 4218 |
5yzg:F (4.1Å) |
97 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
29301961 |  1334  1124  s59  M021_0.6 |
Assembly1 protein:A:25~2335 18,21,37,55~56,63~67,69~73,82 protein:J:179~802 60,78~79,83~86 protein:L:6~795 35,45,48~50,60,79~80 protein:M:114~204 86~88 protein:N:1~143 1~2,19~24,27~28 protein:O:19~303 23~24,26~30 protein:W:83~578 21~22 protein:Y:2~205 43,45,49,51~52 rna:B:8~104 67,69~70 rna:G:-23~154 29~30,32~34,36,38~41,43~45,53~ 54,71,73 rna:H:1~184 47,49~56,80,82~83,87~97 MG:F:200 72,74 MG:F:201 53~54,74 MG:F:204 55,71 |
| 4219 |
5yzg:H (4.1Å) |
139 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
29301961 |  1212  1340  1110  1373  M068_0.6  504 |
Assembly1 protein:A:25~2335 15~16,18,21~24,26,29~31,33~36, 38,45 protein:y:2~192 39~40 protein:M:114~204 10~13 protein:X:2~72 31~33 protein:Y:2~205 36,38,40~41 protein:s:68~504 79~81 protein:h:4~85 100~101 protein:i:4~89 101~103 protein:j:1~82 102~103,105 protein:k:20~116 98,104~107 protein:m:2~75 98~99,104~107 protein:l:14~92 99,106 protein:n:4~76 100~101,168 protein:p:3~96 154~155,158~167,169~171 rna:F:1~97 1~12,16~17,19~22,25~28 rna:G:-23~154 31~33,35~39,41~46 |
| 4220 |
5z3g:A (3.65Å) |
1501 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000061F377 | RF02543 | Saccharomyces cerevisiae 4932 |
29557065 |  M107_0.6  M080_0.6  M299_0.6  16 |
Assembly1 rna:B:1~156 1,3~23,59,330~337,339~342,345~ 346,349,351,368~369,404~409,41 1~420,656~657,691,1394~1395,13 99,1419,1441 rna:C:1~232 1,3 protein:F:12~387 3001~3003,3005,3009~3011,3036~ 3039,3044~3047,3049,3086~3087, 3089~3090,3096~3098,3100,3137~ 3140,3146~3151,3241~3244,3294~ 3297,3304~3307,3313~3316,3320, 3328~3330,3370,3375,3378~3380, 3389 protein:G:2~362 208~212,336~341,344,346~347,35 5~356,364~365,505,514~516,519, 578~579,590,596,599,608~610,65 8,660,662,664,674,680~681,689, 691~696,789~790,800,803~805,92 9,933,1346~1349,1361,1380~1386 ,1388~1389,1419~1420,1424~1427 ,1429,1436~1439 protein:I:8~176 444~445,500~503,591,593,595,60 7~608,611~612,3176~3177,3215~3 216,3219,3265,3267~3273,3276~3 277 protein:J:6~244 507~508,517,519~520,576~578,59 5~598,983~987,1100~1102,1158~1 159,1167~1171,1333~1335,1361~1 362 protein:K:69~235 7,117,119~121,123,140,144~148 protein:L:1~191 1210~1212,3020,3024~3026,3034~ 3036,3108,3110~3113,3122~3123, 3126,3184~3187,3198 protein:M:1~460 5~7,142 protein:N:1~226 3018~3019,3022 protein:O:88~295 196~198,438,441,620~621,3163 protein:P:21~128 66,72~77,102~103,106~108,110~1 11,156,683,685~687,691,699 protein:Q:2~138 524~525,534,559~561,1185~1186, 3198~3200,3206~3208,3210~3215, 3229,3260~3261 protein:R:2~204 18~20,28~29,49,55~58,63~65,69, 77,79,81~82,98,113~114,126~127 ,147~149,267~269,281~282,287~2 91,294,297,320~321,665,682~683 protein:S:3~199 632,1174~1176,1181,1189~1190,1 311~1316,1318,2365~2366,2382,3 005,3007~3008,3134~3135,3172~3 173,3178~3183,3185,3190~3192,3 243~3244 protein:T:10~160 382,388~389,402,412~414,1446~1 448,2352~2353,2356,3164~3165,3 297~3298,3308~3309,3392 protein:U:15~148 671~674,676~677,720,727~730,74 2~745,784~786,974~976,1347~134 8 protein:V:6~421 192~194,452~453,472~474 protein:W:2~171 519,521~523,534~535,562,1182~1 183,1186~1187,1211~1214,1295,1 316,1321~1322,1324,3185~3186,3 205~3208 protein:X:3~243 464~467,730~731 protein:Y:41~484 155,161,260,264 protein:Z:2~170 196~197,398,439~442,464,468~47 0,482~483,485,1350~1355,1384,1 392,1414~1415 protein:a:26~255 272~273,283~285,303~304 protein:c:2~126 184~186,188~190,200,212~218,22 4~226,228~230,335~336,375,378 protein:d:90~286 252,350,384~385,401~402,687 protein:i:5~128 423~424,427,439,634,639,655,94 4~945,947,1144~1147,1161,1338~ 1340,1366,1388~1389,1392~1394, 1402~1405,1407~1408,1410~1413, 1433 protein:j:2~107 429~433,509,583~586,631~633,11 49,1151,1166~1167,1177~1178,11 80,1326~1330,3173~3176,3216,32 19,3274,3276 protein:l:3~119 17~20,128,135~136,151~153,239, 255 protein:m:32~98 265,293~294,297~298 protein:n:14~85 23~24,52~53,55,347,353,359~364 ,812~815,929~930 |
| 4221 |
5z3g:B (3.65Å) |
156 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae 4932 |
29557065 |  441 |
Assembly1 rna:A:1~3395 3~12,14~22,24~33,35~37,40,52~5 3,104,136,138~150,152~156 protein:K:69~235 154~155 protein:M:1~460 115~116,120,127~131 protein:P:21~128 28~31 protein:R:2~204 141~143 protein:T:10~160 3~4,12~13 protein:c:2~126 22~25,70~74,83~85,91 protein:l:3~119 36~38,49,60~61,63~65,86~87,97 protein:n:14~85 34~36,40~43,56~57,67,94~95,104 ,111 |
| 4222 |
5z56:F (5.1Å) |
93 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
29360106 | 1334 1124 s59 M021_0.6 |
Assembly1 protein:A:25~2335 18,21,55~57,64~73 protein:2:461~689 42~45 protein:J:216~802 60,93~95 protein:L:6~795 48~49,60 protein:N:1~143 1~2,19~24,27~28 protein:O:19~303 23~24,26~30 rna:B:8~104 66~67,69~70 rna:G:-12~163 30,32~41,43~45,73 rna:H:1~184 47~56,87~95,97 MG:F:200 72,74 MG:F:201 53~54,74 MG:F:204 55,71 |
| 4223 |
5z56:H (5.1Å) |
136 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
29360106 | M068_0.6  1384 504 1212 1373 |
Assembly1 protein:A:25~2335 20~24,26,30 protein:k:20~116 98,104~105 protein:m:2~75 98~99,106 protein:l:14~92 99,106 protein:n:4~76 100,168 protein:p:7~224 163~164,166~167,170 protein:w:2~499 45~46 protein:v:18~223 29,39~42 protein:1:82~1304 31,33,36~37,56 protein:2:461~689 56~57 rna:F:1~97 1,3~11,20~22,25~28 rna:G:-12~163 31~33,35~45 |
| 4224 |
5z57:F (6.5Å) |
93 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
29360106 | 1334 1124 s59 M021_0.6 |
Assembly1 protein:A:25~2335 18,21,55~57,64~73 protein:2:461~689 42~45 protein:J:216~802 60,93~95 protein:L:6~795 48~49,60 protein:N:1~143 1~2,19~24,27~28 protein:O:19~303 23~24,26~30 rna:B:8~104 66~67,69~70 rna:G:-12~163 30,32~41,43~45,73 rna:H:1~184 47~56,87~95,97 MG:F:200 72,74 MG:F:201 53~54,74 MG:F:204 55,71 |
| 4225 |
5z57:H (6.5Å) |
136 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
29360106 | M068_0.6 1384 504 1212 1373 |
Assembly1 protein:A:25~2335 20~24,26,30 protein:k:20~116 98,104~105 protein:m:2~75 98~99,106 protein:l:14~92 99,106 protein:n:4~76 100,168 protein:p:7~224 163~164,166~167,170 protein:w:2~499 45~46 protein:v:18~223 29,39~42 protein:1:82~1304 31,33,36~37,56 protein:2:461~689 56~57 rna:F:1~97 1,3~11,20~22,25~28 rna:G:-12~163 31~33,35~45 |
| 4226 |
5z58:F (4.9Å) |
93 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
29360106 | 1334 1124 s59 M021_0.6 |
Assembly1 protein:A:25~2335 18,21,29,55~57,64~71 protein:2:461~689 42~45 protein:J:216~802 60,93~95 protein:L:6~235 48~49,60 rna:B:8~104 66~67,69~70 rna:G:-12~163 30,32~41,43~45,73 rna:H:1~184 47~56,87~95,97 MG:F:200 72,74 MG:F:201 53~54,74 MG:F:204 55,71 |
| 4227 |
5z58:H (4.9Å) |
136 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
29360106 | M068_0.6 1384 504 1212 1373 |
Assembly1 protein:A:25~2335 20~24,26,30 protein:k:20~116 98,104~105 protein:m:2~75 98~99,106 protein:l:14~92 99,106 protein:n:4~76 100,168 protein:p:7~224 163~164,166~167,170 protein:w:2~499 45~46 protein:1:82~1304 31,33,36~37,56 protein:2:461~689 56~57 rna:F:1~97 1,3~11,20~22,25~28 rna:G:-12~163 31~33,35~45 |
| 4228 |
5zeb:A (3.4Å) |
3102 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000BC467B | RF02541 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 rna:a:9~1518 1919~1921,2053~2054,2063,2065, 2136~2137,2140,2143~2144,2171~ 2173,2183~2185 rna:v:1~77 2147,2288,2475~2477,2479,2674~ 2675 rna:B:1~117 976~978,1031~1034,1068 protein:f:1~96 1560,1611~1612 protein:u:2~33 2049,2157~2158,2198~2199 protein:C:3~275 805~807,809,820~821,843~844,87 9,888,894~897,899,1646,1711,17 20~1721,1785~1789,1911,1913,20 05~2009,2013~2017,2020~2023,20 29~2037,2040~2044,2058,2061~20 62,2125~2127,2195~2196,2296,22 98,2309,2427,2445,2814~2815,28 21~2825 protein:D:2~215 858~859,861,1248,1872~1875,188 8,1893,2217,2222,2272~2277,273 5~2737,2795~2796,2798~2799,280 2~2804,2842~2846,2858~2862,290 3~2907,2947~2948,2952~2955,299 5~2997,3008~3010,3031~3032,304 1,3043~3044,3051~3052,3054 protein:E:3~209 34~35,402~405,422,529~532,537, 539~540,557~558,678,681~682,68 4,693,699~700,706,708~710,713, 773~775,788~790,911~912,916,13 19,1361~1363,1370~1373,2283~22 85,2668~2669 protein:F:6~186 2522,2526~2529,2531~2532,2534~ 2538 protein:G:2~177 1230~1231,2750,2752,2754~2755, 2877,2881~2882,2890~2891,2967~ 2973,2975,2981~2982 protein:H:1~151 157~158,162~164,281~282,2315~2 317,2319,2421~2422 protein:I:1~126 1163~1165,1171~1173,1175,1201~ 1202,1224~1225 protein:J:10~142 1176~1182,1194,1197~1199 protein:K:1~147 3~4,615~616,623~625,642,649~65 1,1113,1124~1125,1127,1129~113 1,1140,1249~1250,1256~1260,126 2,2264,2738,2863~2866,2992,300 4 protein:L:1~121 1882~1885,2176,2219~2220,2771, 2785~2787,2789,2898~2900,2907~ 2909,2950 protein:M:3~147 195,244~245,249,658,679~680,69 0~691,714,718~721,724~728,730~ 731,776~778,781,920,922,925~92 8,940~941,946~948,1059~1060,13 04~1308,1317~1319,1358,1360,13 64~1365,2583~2584,2616~2618,26 30,2638~2641,2652 protein:N:1~134 986~987,989~990,1020,1022,1024 ~1027,1070~1075,1077,1147~1148 ,1193~1194,2474~2475,2500~2501 ,2691~2693,2707~2709,2719~2720 protein:O:2~118 1390,1392~1394,1402,1409~1410, 1674~1675,1867~1871,2225~2226, 2233,2913~2914,2930,2932,3043, 3060~3062,3071~3072,3090,3092~ 3094,3101~3103 protein:P:2~127 2517~2520,2540,2558~2559,2600~ 2601 protein:Q:1~113 1970~1971,2906,2908~2909,2942~ 2943,3063~3064,3068~3070,3096~ 3097 protein:R:2~125 15~16,26,533,535,619~623,651~6 53,655,672~676,1110~1116,1127~ 1130,1268~1273,1275,1312~1314, 1330~1331,1342,1363,1365~1367, 2242~2245 protein:S:2~103 641,656~657,659,663~665,929~93 0,1108,1110~1112,1279~1282,130 2~1303,1336~1339 protein:T:6~119 20~22,574~575,577~578,580~582, 595,604~606,862~863,866,1375,1 377,1381,1436~1440,1832~1833,2 234~2238 protein:U:4~97 55~56,61,141~142,544,1451~1457 ,1507~1508,1815~1819 protein:V:1~105 81~83,378~379,381,383,409~411, 417,568~569,571~572,585~587 protein:X:5~86 758~759,970~973,1037~1038,2485 ~2487,2494~2495,2502~2503,2553 ~2558,2560,2576~2578,2580~2581 ,2588~2590,2610 protein:Y:2~64 164~165,187~188,198~200,460,46 7~470,475,483~487,1479~1480,23 02~2303,2313~2315,2422~2424,24 41~2442,2452~2456 protein:Z:5~67 57~58,69,72~74,92~94,109 protein:1:2~61 964~966,1035,1041~1044,1085~10 87,1106~1107,1116~1118,1277 protein:3:2~55 12~13,605,1377~1381,2239~2241, 2243,2245,2269~2270,2279~2281, 2838~2839,3036,3103,3105~3108 protein:4:6~55 2508~2510,2568~2569,2571~2572, 2594~2595,2643,2645 protein:5:3~47 50~51,121~123,209~210,546~547, 552~557,797,799,801~803,868~86 9,885~886,1424,1472,1482~1483, 1830~1831,1837~1838 protein:6:2~64 242~243,246~247,250~251,253,68 3,685,723~725,745~746,950,2572 ,2574~2575,2583,2585~2587,2615 ~2618,2643~2644 protein:7:1~37 1149~1150,1242~1243,2689~2691, 2701~2702,2750~2753,2763,2966~ 2967,2978,2980~2981 protein:8:2~24 1065~1066,1078,1096~1097,1100, 1102~1104,1120~1121,1144,1252, 2252~2253,2255,2679~2681,2713 |
|
| 4229 |
5zeb:B (3.4Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000047BBB1 | RF00001 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:F:6~186 30,33,41~43,45,55~57 protein:P:2~127 7~9,27~30,46~52,57~60,110~111 protein:W:6~193 73~77,80,90~93,100~101 protein:1:2~61 82~83 protein:2:1~66 40,42~44 rna:A:2~3119 78~81,88,94~97 |
|
| 4230 |
5zeb:a (3.4Å) |
1506 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001AF2F7 | RF00177 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:c:1~210 421,512,1035~1038,1041~1042,10 86~1089,1091~1092,1170~1175,11 86~1187 protein:e:17~214 10~13,19~20,22~23,540,846,903~ 905,1050~1051,1053,1058~1061,1 379~1381 protein:g:1~156 673~674,914~915,917,920~922,12 20~1222,1272~1273,1279~1280,13 27~1328,1331~1333,1355,1357~13 60,1362~1364 protein:h:3~132 567,569~571,578~580,622~623,63 2~633,804~808,856~860 protein:i:25~150 951~952,1097~1099,1128~1130,11 59~1161,1168,1213~1214,1229~12 31,1273,1324~1332,1350~1351,13 53~1356 protein:j:5~101 945~946,951,954~955,1039~1042, 1106,1131~1133,1179~1180,1260~ 1261,1349 protein:k:22~138 654~655,663~664,666~672,674~67 5,686~687,696,698,758~759,776, 1490,1506 protein:l:2~123 37,39~41,363,482~483,500~502,5 05~506,509,517~518,531~533,542 ~544,547~548,739,862~864,893~8 94,1476 protein:o:2~88 559,561~562,636~639,647~649,70 8,710,719~722,730~731,733~734, 744,789 protein:q:6~97 123~127,136~137,193~195,200,22 5~227,234~236,253~254,264~265, 273,275~277,280,544,565,625 protein:r:16~79 653~654,698~701,714~716,814~81 6,827 protein:s:6~83 938~941,967~968,997~998,1201~1 204,1206~1207,1295,1300~1303 protein:t:3~86 64,100,103~104,129,182,184~185 ,206~209,260~262,322~324,326,3 31~333,350,1420~1422,1442~1443 protein:n:2~61 955~957,961~964,977,1027~1029, 1039~1040,1094,1168~1170,1183~ 1184,1197,1199~1200,1299,1340~ 1342,1351 protein:b:1~228 808~812,1053~1055,1077~1078,10 80~1085,1140 protein:d:2~201 12,32,401~409,413,426~427,436~ 439,488~492,521~527,593,599~60 0 protein:f:1~96 642~643,653~654,690~691,715~71 9 protein:m:2~117 930~934,1206~1210,1278~1279,12 83~1284,1289~1291,1303~1304,13 10~1312 protein:p:2~114 47~48,106,108,228~230,310,375~ 377,390~393,449,452,587~589,59 7,602~606 protein:u:2~33 551,872~873,884,897~899,1377,1 388~1389,1470~1471,1484,1493~1 495,1498,1502,1504,1513 protein:C:3~275 692~693,753 protein:L:1~121 338~339,1404~1405 protein:Q:1~113 345~346,1414~1415,1425,1447 rna:v:1~77 770,948,1210~1211,1320~1322,13 83 rna:A:2~3119 682,763~764,1390~1392,1401~140 2,1412,1457~1459,1467~1468,147 7~1480,1501 |
|
| 4231 |
5zeb:v (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
30206241 | Assembly1 rna:a:9~1518 31~32,35,39~42 rna:A:2~3119 2,12,25,75~77 protein:F:6~186 57~58 protein:X:5~86 1~2,74~75 |
|
| 4232 |
5zep:A (3.4Å) |
3102 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000BC467B | RF02541 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 rna:a:9~1518 1919,2065,2136~2138,2143~2144, 2172~2173 rna:w:1~77 2068~2069,2645 rna:B:1~117 976~978,1031~1034,1068 protein:f:1~96 1560,1611~1612 protein:u:2~33 2049,2157~2158 protein:0:1~459 1589~1590 protein:C:3~275 805~807,809,820~821,843~844,87 9,888,894~897,899,1646,1711,17 20~1721,1785~1790,1911,1913,20 05~2009,2013~2017,2020~2023,20 29~2037,2040~2044,2058,2061~20 62,2125~2127,2195~2196,2296,22 98,2309,2427,2445,2814~2815,28 21~2825 protein:D:2~215 858~859,861,1248,1872~1875,188 8,1893,2217,2222,2256,2272~227 7,2735~2737,2795~2796,2798~279 9,2802~2804,2842~2846,2858~286 2,2903~2907,2947~2948,2952~295 5,2995~2997,3008~3010,3031~303 2,3041,3043~3044,3051~3052,305 4 protein:E:3~209 34~35,402~405,422,529~532,537, 539~540,557~558,678,681~682,68 4,693,699~700,706,708~710,713, 773~775,788~790,911~912,916,13 19,1361~1363,1370~1373,2283~22 85,2668~2669 protein:F:6~186 2522,2526~2529,2531~2532,2534~ 2538 protein:G:2~177 1230~1231,2750,2752,2754~2755, 2877,2881~2882,2890~2891,2967~ 2973,2975,2981~2982 protein:H:1~151 157~158,162~164,281~282,2315~2 317,2319,2421~2422 protein:I:1~126 1163~1165,1171~1173,1175,1201~ 1202,1224~1225 protein:J:10~142 1176~1182,1194,1197~1199 protein:K:1~147 3~4,615~616,623~625,642,649~65 1,1113,1124~1125,1127,1129~113 1,1140,1249~1250,1256~1260,126 2,2264,2738,2863~2866,2992,300 4 protein:L:1~121 1882~1885,2176,2219~2220,2771, 2785~2787,2789,2898~2900,2907~ 2909,2950 protein:M:3~147 195,244~245,249,658,679~680,69 0~691,714,718~721,724~728,730~ 731,776~778,781,920,922,925~92 8,940~941,946~948,1059~1060,13 04~1308,1317~1319,1358,1360,13 64~1365,2583~2584,2616~2618,26 30,2638~2641,2652 protein:N:1~134 986~987,989~990,1020,1022,1024 ~1027,1070~1075,1077,1147~1148 ,1193,2474~2475,2500~2501,2691 ~2693,2707~2709,2719~2720 protein:O:2~118 1390,1392~1394,1402,1409~1410, 1674~1675,1867~1871,2225~2226, 2233,2913~2914,2930,2932,3043, 3060~3062,3071~3072,3090,3092~ 3094,3101~3103 protein:P:2~127 2517~2520,2540,2558~2559,2600~ 2601 protein:Q:1~113 1970~1971,2906,2908~2909,2942~ 2943,3063~3064,3068~3070,3096~ 3097 protein:R:2~125 15~16,26,533,535,619~623,651~6 53,655,672~676,1110~1116,1127~ 1130,1268~1273,1275,1312~1314, 1330~1331,1342,1363,1365~1367, 2242~2245 protein:S:2~103 641,656~657,659,663~665,929~93 0,1108,1110~1112,1279~1282,130 2~1303,1336~1339 protein:T:6~119 20~22,574~575,577~578,580~582, 595,604~606,862~863,866,1375,1 377,1381,1436~1440,1832~1833,2 234~2238 protein:U:4~97 55~56,61,141~142,544,1451~1457 ,1507~1508,1815~1819 protein:V:1~105 81~83,378~379,381,383,409~411, 417,568~569,571~572,585~587 protein:X:5~86 758~759,970~973,1037~1038,2485 ~2487,2494~2495,2502~2503,2553 ~2558,2560,2576~2578,2580~2581 ,2588~2590,2610 protein:Y:2~64 164~165,187~188,198~200,460,46 7~470,475,483~487,1479~1480,23 02~2303,2313~2315,2422~2424,24 41~2442,2452~2456 protein:Z:5~67 57~58,69,72~74,92~94,109 protein:v:2~61 964~966,1035,1041~1044,1085~10 87,1106~1107,1116~1118,1277 protein:z:2~55 12~13,605,1377~1381,2239~2241, 2243,2245,2269~2270,2279~2281, 2838~2839,3036,3103,3105~3108 protein:1:6~55 2508~2510,2568~2569,2571~2572, 2594~2595,2643,2645 protein:2:3~47 50~51,121~123,209~210,546~547, 552~557,797,799,801~803,868~86 9,885~886,1424,1472,1482~1483, 1830~1831,1837~1838 protein:3:2~64 242~243,246~247,250~251,253,68 3,685,723~725,745~746,950,2572 ,2574~2575,2583,2585~2587,2615 ~2618,2643~2644 protein:4:1~37 1149~1150,1242~1243,2689~2691, 2701~2702,2750~2753,2763,2966~ 2967,2978,2980~2981 protein:5:2~24 1065~1066,1078,1096~1097,1100, 1102~1104,1120~1121,1144,1252, 2252~2253,2255,2679~2681,2713 |
|
| 4233 |
5zep:B (3.4Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000047BBB1 | RF00001 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:F:6~186 33,41~43,45,54~57 protein:P:2~127 7~9,27~30,46~52,57~60,110~111 protein:W:6~191 73~77,80,90~93,100~101 protein:v:2~61 82~83 protein:y:1~66 40,42~44 rna:A:2~3119 78~81,88,94~97 |
|
| 4234 |
5zep:a (3.4Å) |
1506 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001AF2F7 | RF00177 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:c:1~210 421,512,1035~1038,1041~1042,10 86~1089,1091~1092,1170~1175,11 86~1187 protein:e:17~214 10~13,19~20,22~23,540,846,903~ 905,1050~1051,1053,1058~1061,1 379~1381 protein:g:1~156 673~674,914~915,917,920~922,12 20~1222,1272~1273,1279~1280,13 27~1328,1331~1333,1355,1357~13 60,1362~1364 protein:h:3~132 567,569~571,578~580,622~623,63 2~633,804~808,856~860 protein:i:25~150 951~952,1097~1099,1109~1110,11 28~1130,1159~1161,1168,1211,12 13~1214,1229~1231,1273,1324~13 32,1350~1351,1353~1356 protein:j:5~101 945~946,954~955,1039~1042,1106 ,1131~1133,1178~1180,1260~1261 ,1349 protein:k:22~138 654~655,663~664,666~672,674~67 5,686~687,696,698,758~759,776, 1490,1506 protein:l:2~123 37,39~41,363,482~483,500~502,5 05~506,509,517~518,531~533,542 ~544,547~548,739,862~864,893~8 94,1476 protein:o:2~88 559,561~562,636~639,647~649,70 8,710,719~722,730~731,733~734, 744,789 protein:q:6~97 123~127,136~137,193~195,200,22 5~227,234~236,253~254,264~265, 273,275~277,280,544,565,625 protein:r:16~79 653~654,698~701,714~716,814~81 6,827 protein:s:6~83 938~941,967~968,997~998,1201~1 204,1206~1207,1295,1300~1303 protein:t:3~86 64,100,103~104,129,182,184~185 ,206~209,260~262,322~324,326,3 31~332,349~350,1420~1422,1442~ 1443 protein:n:2~61 955~957,961~964,977,1027~1029, 1039~1040,1094,1168~1170,1183~ 1184,1197,1199~1200,1299,1340~ 1342,1351 protein:b:1~228 808~812,1053~1055,1077~1078,10 80~1085,1140 protein:d:2~201 12,32,401~409,413,426~427,436~ 439,488~492,521~527,593,599~60 0 protein:f:1~96 642~643,653~654,690~691,715~71 9 protein:m:2~117 930~934,1206~1210,1278~1279,12 83~1284,1289~1291,1303~1304,13 10~1312 protein:p:2~114 47~48,106,108,228~230,310,375~ 377,390~393,449,452,587~589,59 7,602~606 protein:u:2~33 551,872~873,884,897~899,1377,1 388~1389,1470~1471,1484,1493~1 495,1498,1502,1504,1513 protein:x:31~130 510,512,673~674,769~770,908,93 5~936,946~949,951,1032~1035,11 77,1210~1211,1321~1323,1383,14 77 protein:L:1~121 338,1405 protein:Q:1~113 345~346,1414~1415,1425,1447 protein:y:1~66 1293~1294 rna:w:1~77 1322,1365~1366 rna:A:2~3119 682,1390~1392,1401~1402,1458~1 459,1477~1479,1501 |
|
| 4235 |
5zep:w (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
30206241 | Assembly1 protein:g:1~156 31~34,38~43 protein:k:22~138 40~41 protein:x:31~130 36~39 rna:A:2~3119 71~73,77 |
|
| 4236 |
5zet:A (3.2Å) |
3102 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000BC467B | RF02541 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:C:3~275 805~807,809,820~821,843~844,87 9,888,894~897,899,1646,1711,17 20~1721,1785~1789,1911,1913,20 05~2009,2013~2017,2020~2023,20 29~2037,2040~2044,2058,2061~20 62,2125~2127,2195~2196,2296,22 98,2309,2427,2445,2814~2815,28 21~2825 protein:D:2~215 858~859,861,1248,1872~1875,188 8,1893,2217,2222,2256,2272~227 7,2735~2737,2795~2796,2798~279 9,2802~2804,2842~2846,2858~286 2,2903~2907,2947~2948,2952~295 5,2995~2997,3008~3010,3031~303 2,3041,3043~3044,3051~3052,305 4 protein:E:3~209 34~35,402~405,422,529~532,537, 539~540,557~558,678,681~682,68 4,693,699~700,706,708~710,713, 773~775,788~790,911~912,916,13 19,1361~1363,1370~1373,2283~22 85,2668~2669 protein:F:6~186 2522,2526~2529,2531~2532,2534~ 2538 protein:G:2~177 1230~1231,2750,2752,2754~2755, 2877,2881~2882,2890~2891,2967~ 2973,2975,2981~2982 protein:H:1~151 157~158,162~164,281~282,2315~2 317,2319,2421~2422 protein:I:1~126 1163~1165,1171~1173,1175,1201~ 1202,1224~1225 protein:J:10~142 1176~1182,1194,1197~1199 protein:K:1~147 3~4,615~616,623~625,642,649~65 1,1113,1124~1125,1127,1129~113 1,1140,1249~1250,1256~1260,126 2,2264,2738,2863~2866,2992,300 4 protein:L:1~121 1882~1885,2176,2219~2220,2771, 2785~2787,2789,2898~2900,2907~ 2909,2950 protein:M:3~147 195,244~245,249,658,679~680,69 0~691,714,718~721,724~728,730~ 731,776~778,781,920,922,925~92 8,940~941,946~948,1059~1060,13 04~1308,1317~1319,1358,1360,13 64~1365,2583~2584,2616~2618,26 30,2638~2641,2652 protein:N:1~134 986~987,989~990,1020,1022,1024 ~1027,1070~1075,1077,1147~1148 ,1193~1194,2474~2475,2500~2501 ,2691~2693,2707~2709,2719~2720 protein:O:2~118 1390,1392~1394,1402,1409~1410, 1674~1675,1867~1871,2225~2226, 2233,2913~2914,2930,2932,3043, 3060~3062,3071~3072,3090,3092~ 3094,3101~3103 protein:P:2~127 2517~2520,2540,2558~2559,2600~ 2601 protein:Q:1~113 1970~1971,2906,2908~2909,2942~ 2943,3063~3064,3068~3070,3096~ 3097 protein:R:2~125 15~16,26,533,535,619~623,651~6 53,655,672~676,1110~1116,1127~ 1130,1268~1273,1275,1312~1314, 1330~1331,1342,1363,1365~1367, 2242~2245 protein:S:2~103 641,656~657,659,663~665,929~93 0,1108,1110~1112,1279~1282,130 2~1303,1336~1339 protein:T:6~119 20~22,574~575,577~578,580~582, 595,604~606,862~863,866,1375,1 377,1381,1436~1440,1832~1833,2 234~2238 protein:U:4~97 55,61~62,141~142,544,1450~1457 ,1507~1508,1815~1819 protein:V:1~105 81~83,378~379,381,383,409~411, 417,568~569,571~572,585~587 protein:X:5~86 757~759,970~973,1037~1038,2485 ~2487,2494~2495,2502~2503,2553 ~2558,2560,2576~2578,2580~2581 ,2588~2590,2610 protein:Y:2~64 164~165,187~188,198~200,460,46 7~470,475,483~487,1479~1480,23 02~2303,2313~2315,2422~2424,24 41~2442,2452~2456 protein:Z:5~67 57~58,69,72~74,92~94,108~109 protein:1:2~61 964~966,1035,1041~1044,1085~10 87,1106~1107,1116~1118,1277 protein:3:2~55 12~13,605,1377~1381,2239~2241, 2243,2245,2269~2270,2279~2281, 2838~2839,3036,3103,3105~3108 protein:4:6~55 2508~2510,2568~2569,2571~2572, 2594~2595,2643,2645 protein:5:3~47 50~51,121~123,209~210,546~547, 552~557,797,799,801~803,868~86 9,885~886,1424,1472,1482~1483, 1830~1831,1837~1838 protein:6:2~64 242~243,246~247,250~251,253,68 3,685,723~725,745~746,950,2572 ,2574~2575,2583,2585~2587,2615 ~2618,2643~2644 protein:7:1~37 1149~1150,1242~1243,2689~2691, 2701~2702,2750~2753,2763,2966~ 2967,2978,2980~2981 protein:8:2~24 1065~1066,1078,1096~1097,1100, 1102~1104,1120~1121,1144,1252, 2252~2253,2255,2679~2681,2713 rna:B:1~117 976~978,1031~1034,1068 |
|
| 4237 |
5zet:B (3.2Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000047BBB1 | RF00001 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:F:6~186 33,41~43,45,54~55,57 protein:P:2~127 7~9,27~30,46~52,58~60,110~111 protein:W:6~193 73~77,80,90~93,100~101 protein:1:2~61 82~83 protein:2:1~66 40,42~44 rna:A:2~3119 78~81,88,94~97 |
|
| 4238 |
5zeu:a (3.7Å) |
1506 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001AF2F7 | RF00177 | Mycolicibacterium smegmatis MC2 155 246196 |
30206241 | Assembly1 protein:c:1~210 421,512,1035~1038,1041~1042,10 86~1089,1091~1092,1170~1175,11 86~1187 protein:e:17~214 10~13,19~20,22~23,540,846,903~ 905,1050~1051,1053,1058~1061,1 379~1381 protein:g:1~156 673~674,914~915,917,920~922,12 20~1222,1272~1273,1279~1280,13 27~1328,1331~1333,1355,1357~13 60,1362~1364 protein:h:3~132 567,569~571,578~580,622~623,63 2~633,804~808,856~860 protein:i:25~150 951~952,1097~1099,1128~1130,11 59~1161,1168,1213~1214,1229~12 31,1273,1324~1332,1350~1351,13 53~1356 protein:j:5~101 945~946,951~952,954,1039~1042, 1106,1131~1133,1179~1180,1260~ 1261,1349 protein:k:22~138 654~655,663~664,666~672,674~67 5,686~687,696,698,758~759,776, 1490,1506 protein:l:2~123 37,39~41,363,482~483,500~502,5 05~506,509,517~518,531~533,542 ~544,547~548,739,862~864,893~8 94,1476 protein:o:2~88 559,561~562,636~639,647~649,70 8,710,719~722,730~731,733~734, 744,789 protein:q:6~97 123~127,136~137,193~195,200,22 5~227,234~236,253~254,264~265, 273,275~277,280,544,565,625 protein:r:16~79 653~654,698~701,714~716,814~81 6,827 protein:s:6~83 938~941,967~968,997~998,1201~1 204,1206~1207,1295,1300~1303 protein:t:3~86 64,100,103~104,129,182,184~185 ,206~209,260~262,322~324,326,3 31~332,349~350,1420~1422,1442~ 1443 protein:n:2~61 955~957,961~964,977,1027~1029, 1039~1040,1094,1168~1170,1183~ 1184,1197,1199~1200,1299,1340~ 1342,1351 protein:b:1~228 808~812,1053~1055,1077~1078,10 80~1085,1140 protein:d:2~201 12,32,401~409,413,426~427,436~ 439,488~492,521~527,593,599~60 0 protein:f:1~96 642~643,653~654,690~691,715~71 9 protein:m:2~117 930~934,1206~1210,1278~1279,12 83~1284,1289~1291,1303~1304,13 10~1312 protein:p:2~114 47~48,106,108,228~230,310,375~ 377,390~393,449,452,587~589,59 7,602~606 protein:u:2~33 551,872~873,884,897~899,1377,1 388~1389,1470~1471,1484,1493~1 495,1498,1502,1504,1513 rna:v:1~77 770,948,1210~1211,1320~1322,13 83 |
|
| 4239 |
5zeu:v (3.7Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
30206241 | Assembly1 rna:a:9~1518 31~32,35,39~42 |
|
| 4240 |
5zey:B (12.5Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
30206241 | Assembly1 rna:A:1~369 35~36 |
|
| 4241 |
5zlu:DD (3.6Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000D77933 | RF00005 | Thermus thermophilus HB8 300852 |
29712846 | Assembly1 rna:W:14~20 35,37~38 rna:G:5~1542 31~32,35,39,41~42 protein:O:2~128 34~35 protein:c:4~182 56~58 protein:EE:1~490 17,20~21,57,72~76 |
|
| 4242 |
5zlu:G (3.6Å) |
1514 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000D7794C | RF00177 | Thermus thermophilus HB8 300852 |
29712846 | Assembly1 rna:W:14~20 693,926,1397,1400~1401 rna:V:5~2898 702,1407~1409,1418,1429,1483,1 492~1495,1517 rna:DD:1~77 790,966,1230,1338~1340,1400 protein:A:2~98 130,189~190,234~235,237,253~25 5,264~267,276~280,760 protein:B:16~88 674,718~719,721,734~736,835 protein:C:8~106 106~108,175,177,186A,186B,191F ,191~193,195~196,259,261~263,3 22~324,1438 protein:D:1~81 957,986,1014,1220~1223,1225~12 26,1311~1313,1318~1320,1322 protein:E:3~100 964,972~973,1060~1061,1124~112 5,1150~1152,1252~1254,1367 protein:F:2~25 1243,1267~1268,1289,1305~1306, 1325~1328,1364 protein:H:7~228 828~829,843,1074~1075,1098~109 9,1101,1104 protein:I:2~207 532,1055,1060~1061,1108,1112~1 113,1189~1191,1205 protein:J:2~209 8,403~404,407~409,412~413,429~ 430,436~437,491,509,511~512,54 1~543,545~547,619~620 protein:K:5~154 6~9,16,559~560,921,1070,1074,1 079~1081,1396,1398 protein:L:1~101 671,710,737~739 protein:M:2~156 693,932~933,935,939,1239~1240, 1298,1346,1351,1372,1374~1381 protein:N:1~138 590~591,599,640,642,653,824,82 6,828,875~878 protein:O:2~128 1117~1118,1130,1147,1179,1187, 1232,1249~1251,1291,1342~1343, 1345,1347,1350~1351,1368~1372 protein:P:11~129 675~676,683~684,688~692,695,70 4,706~707,716~718,778,796 protein:Q:5~128 33,35~37,302,363,500~503,521~5 23,525,537~539,551~553,562~564 ,585,880~881 protein:R:2~115 948~950,954,1225~1229,1295~129 6,1302,1308,1328~1330 protein:S:2~61 974,976,979~980,1048,1060,1187 ,1202~1203,1216,1316~1317,1358 ~1359,1369 protein:T:2~89 658~659,667,728,740,750~751,80 8 protein:U:1~83 110,112,135~137,227,229,310,37 5~377,390~393,452,468,474 protein:h:1~122 1422~1423 protein:m:1~117 345,1431~1432,1463,1465 protein:EE:1~490 1299~1300,1335 |
|
| 4243 |
5zlu:V (3.6Å) |
2875 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000D7791D | RF02541 | Thermus thermophilus HB8 300852 |
29712846 | Assembly1 rna:G:5~1542 1703,1847,1912~1913,1919~1920, 1948,1959~1960 rna:X:-1~120 861,863,918 protein:Y:1~228 2123~2130,2132,2152~2153,2174~ 2178 protein:Z:2~274 691~692,694,727~729,764,779,78 2,784,1371,1424~1425,1490~1491 ,1500,1565~1569,1693,1695,1788 ~1792,1796~1801,1803,1805,1812 ~1813,1815~1820,1822~1827,1830 ,1843,1901,1971,2076,2085,2208 ,2227,2590,2600 protein:a:1~206 1130,1654~1655,1657~1658,1675, 1993,2025,2052~2053,2511~2512, 2571~2572,2574~2575,2579~2580, 2618~2621,2633,2635~2636,2678~ 2680,2682,2723~2724,2729~2730, 2733~2734,2772~2773,2784,2786~ 2787,2809~2811,2820,2822 protein:b:3~210 319~321,323,441~443,449,451,46 8~469,588,601,605~606,614,616, 618A,659~660,673~674,796,801,1 202,1204,1248,1255~1257,2059,2 444~2445 protein:c:4~182 2303~2306,2312~2314,2316 protein:d:2~177 1048,1111,1113,2530~2531,2653, 2666~2668,2745~2749,2751,2758 protein:e:5~130 1044,1046~1047,1055~1058,1082~ 1085,1106~1108 protein:f:4~137 1059,1061~1063,1066~1068,1070, 1075,1077~1079,1081,1095~1096 protein:g:2~118 9,528,558,995,1006,1022,1131~1 132,1137~1140,1142,1142A,2039, 2041~2042,2641~2642,2768 protein:h:1~122 1665~1666,1952,2547,2562,2674~ 2675,2684~2685,2726 protein:i:5~149 195,244~246,252,389,587,598~59 9,626,631~632,637,660~663,807, 810~811,813~814,825,832~833,94 1~943,1190,1193,1245,1247,2392 ~2394,2406 protein:j:6~141 863,865,869~872,904~907,909~91 1,954~956,960,1030,2250~2251,2 275~2277,2467,2484~2485,2496 protein:k:2~118 1275~1277,1279,1287,1294,1453~ 1454,1649,1651,1654,2712A,2713 ,2722,2820~2822,2839,2850,2873 ,2880,2882 protein:l:3~112 2295,2320,2334~2335,2376,2378~ 2379 protein:m:1~117 1754,2718,2845,2847~2849,2867, 2875~2876 protein:n:2~118 18,445,449,531~536,561,580~581 ,583,993,995,997~998,1009~1011 ,1151,1153~1156,1216~1217,1227 ,1248,1252,2019,2021 protein:o:1~101 565,814,992,1160~1163,1187,122 4~1225 protein:p:1~110 486~487,494~495,517,519,748,75 1,1266,1322~1323,1614~1615,201 0~2012 protein:q:3~96 64~65,138,143,456,1312,1336,13 41,1398~1399,1599 protein:r:1~110 84~85,298,302,310,327,329,336~ 338,478~480,483~484 protein:s:1~180 874~875,895~896,903~905 protein:t:6~85 855~856,858,923,2261,2277~2278 ,2330~2331,2334,2352~2357,2364 ~2365,2384,2386~2387 protein:u:1~67 61,74~77,95~97,111~112 protein:v:2~60 849~852,931~932,969,988~989,11 84 protein:w:1~71 372~373,380~381,387~388,396~39 8,400,1363~1366,1809,2079~2080 ,2090~2091,2213,2229~2231,2432 protein:x:4~60 14~16,517,1263~1264,1266,2015~ 2021,2046,2056~2057,2577,2814~ 2816,2884,2886 protein:y:5~53 2285~2286,2345,2347,2371~2372, 2399,2419 protein:z:1~49 53,124~126,180,458~459,464~469 ,684,686~687,770~771,788,1309~ 1310,1368,1612~1613 protein:AA:1~64 242~243,245,247,249,253,592~59 3,630~632,647~648,650,666~667, 2348,2360~2361,2365,2392~2394, 2418~2420,2422 protein:BB:1~37 1030~1031,1034,1090~1091,1124, 2464~2467,2477~2478,2527~2528, 2742,2755~2757 protein:EE:1~490 1859,1885,2061~2062,2064,2112, 2252,2436~2438,2450,2492,2504~ 2507,2553,2583,2585,2595~2597, 2601~2602 |
|
| 4244 |
5zlu:X (3.6Å) |
123 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS00001170B4 | RF00001 | Thermus thermophilus HB8 300852 |
29712846 | Assembly1 rna:V:5~2898 79,96,100 protein:c:4~182 41~43,45,57 protein:j:6~141 90~91 protein:l:3~112 7~9,28~29,37,47~51,113~116 protein:s:1~180 73,75~77,102~104 protein:CC:1~32 40,43 |
|
| 4245 |
5zwm:B (3.4Å) |
175 | GO:0000386 (F) second spliceosomal tra... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000245 (P) spliceosomal complex as... GO:0000350 (P) generation of catalytic... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0034403 (P) alignment of 3' and 5' ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000053F313 | RF00020 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 protein:A:131~2401 32~33,35~36,76,80~85,95~96,99~ 106,111~113,115 protein:E:3~141 97~98 protein:C:102~975 1,45,74~75,163 protein:a:8~103 162~163,171~172 protein:c:20~110 174,177 rna:F:1~112 96~100 |
|
| 4246 |
5zwm:F (3.4Å) |
99 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS0000D7792B | RF00026 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 protein:A:131~2401 1,21~22,26~27,30~33,43,45,48~5 0 protein:K:22~465 74~75 protein:L:39~462 56~57,59~63 protein:J:108~466 60~61,63,65~66,71~73,79~87 protein:E:3~141 30~32,34 protein:M:1~126 77~78 rna:I:1~154 56~81 rna:B:1~183 26~30 rna:H:3~1169 92~102 |
|
| 4247 |
5zwm:H (3.4Å) |
206 | GO:0045131 (F) pre-mRNA branch point b... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000348 (P) mRNA branch site recogn... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0005686 (C) U2 snRNP |
URS000023C730 | RF00004 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 rna:F:1~112 3~13 rna:G:479~522 33~46 protein:h:6~102 116~117,119 protein:i:10~92 113,120 protein:j:12~83 112~113,119~120 protein:k:2~76 114~115 protein:l:4~84 115,1094,1115,1149~1150 protein:m:1~109 110,116~117,119,121~122 protein:n:44~108 111~112,118~119,121 protein:1:156~971 32,34~38,57 protein:2:131~376 57~58 protein:u:2~528 46,48 protein:v:34~253 40~44 |
|
| 4248 |
5zwm:I (3.4Å) |
110 | GO:0017070 (F) U6 snRNA binding GO:0017069 (F) snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000398 (P) mRNA splicing, via spli... GO:0005687 (C) U4 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... GO:0005681 (C) spliceosomal complex |
URS00001143F5 | RF00015 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 protein:A:131~2401 54~55,63 protein:K:22~465 7~8 protein:L:39~462 16~18,20~21,27~29,32~35,37,39, 41~42,49,51~52,55~58 protein:N:4~899 19,40~42,49~51,54~55 protein:J:108~466 8~12,14,22~23,60 protein:M:1~126 7,30~32,43~45 protein:D:447~2163 61~62,71~79,97~99,135~138 protein:P:12~102 91~92,142,147~148 protein:Q:1~146 90,138,148,150 protein:R:17~108 143,149~153 protein:T:10~93 144~145,151 protein:U:12~84 143~144,150~151 protein:V:2~76 145~146 rna:F:1~112 1~18,57~63 |
|
| 4249 |
5zwn:P (3.4Å) |
480 | GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0005685 (C) U1 snRNP GO:0000243 (C) commitment complex |
URS000012D749 | RF00488 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 rna:G:-9~12 1~8,10 protein:Q:1~188 34,121,559~561,563~565 protein:R:2~196 8,10,61,63~65,133,135,137,252, 254~255,257~258,260,265~268,28 4~286,297~299,543 protein:S:3~148 58~63,65~68,141~144,149~150 protein:T:2~540 74~75,114~116,120,253~254,256, 268 protein:U:43~627 76~77 protein:W:45~293 79,84,86,117~118 protein:a:3~133 122~123,156~159,171,279~280,30 2,556~557,561 protein:b:1~119 19,35~36,548,557~559,562 protein:c:8~108 549~550,552,558~560,562 protein:d:5~96 10,114,541~542,554~555 protein:e:10~92 553,560 protein:f:12~83 552~553,558~560 protein:g:2~76 554~555 protein:Y:4~241 6~8,550~551 |
|
| 4250 |
5zwo:B (3.9Å) |
175 | GO:0000386 (F) second spliceosomal tra... GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0000245 (P) spliceosomal complex as... GO:0000350 (P) generation of catalytic... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0034403 (P) alignment of 3' and 5' ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000053F313 | RF00020 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 protein:A:131~2401 32~33,35~36,39~40,79,81,83~86, 96,99,101,103~105,111~115 protein:C:102~975 1,45,75,77 protein:a:8~103 162~163,171 protein:c:20~110 174,177 rna:F:1~112 96~99 |
|
| 4251 |
5zwo:F (3.9Å) |
99 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS0000D7792B | RF00026 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 protein:A:131~2401 1,22,25~27,29~33,42~43,45,48~5 0 protein:K:22~465 74~75 protein:L:39~462 57~61,63 protein:J:107~466 60~61,71~73,80~87 protein:E:3~140 30~32,34 protein:z:3~67 110~111 rna:B:1~183 27~30 rna:I:1~154 56~82 rna:H:3~1169 92~102 |
|
| 4252 |
5zwo:H (3.9Å) |
150 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS0000D77944 | RF00004 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 rna:F:1~112 3~13 rna:G:463~522 32~46 protein:1:156~971 34,57 protein:h:6~102 116~117 protein:j:12~83 113,119 protein:k:2~76 114~115 protein:m:1~109 117,119,122 protein:n:44~108 112,118~119 protein:v:34~253 40~43 |
|
| 4253 |
5zwo:I (3.9Å) |
110 | GO:0017070 (F) U6 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005687 (C) U4 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS0000D77922 | RF00015 | Saccharomyces cerevisiae S288C 559292 |
29794219 | Assembly1 protein:A:131~2401 19,55 protein:L:39~462 17~18,20~21,27,29,32,34~43,55~ 58 protein:N:4~899 19,41~42,49,54~55 protein:J:107~466 1,8~14,23 protein:M:1~126 30~32,43~44 protein:D:447~2163 71~73,75~77,98~99,136 protein:P:12~102 92,147 protein:Q:1~146 138,148 protein:R:17~108 143,149~150,153 protein:T:10~93 144,151 protein:U:12~84 144,151 rna:F:1~112 1~18,57~63 |
|
| 4254 |
5zzm:M (8.1Å) |
117 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000049E57 | RF00001 | Escherichia coli 562 |
29930203 | ||
| 4255 |
5zzm:N (8.1Å) |
2903 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080E25C | RF02541 | Escherichia coli 562 |
29930203 | ||
| 4256 |
6agb:A (3.48Å) |
369 | EC:3.1.26.5 ribonuclease P GO:0004526 (F) ribonuclease P activity GO:0008033 (P) tRNA processing GO:0034965 (P) intronic box C/D snoRNA... GO:0030677 (C) ribonuclease P complex GO:0005655 (C) nucleolar ribonuclease ... |
URS0000413C32 | RF00009 | Saccharomyces cerevisiae S288C 559292 |
30262633 | Assembly1 protein:B:54~875 13~14,17~19,21~25,35~39,74,81~ 84,95~104,107~108,119,121,148, 150~152,155~157,187~188,191,19 5,197,256~259,266,268~270,292, 295~296,299~300,303,305~308,31 1~313,324,345~347 protein:C:14~188 205~206 protein:D:1~279 6~8,155,161,169~171,177~179,30 8,363~365,369 protein:E:2~147 27,29~30,32~34,86,312~316,342~ 343 protein:F:2~158 44~47,66~71,78~79 protein:G:13~140 28~29,36~43,45,78~80,271~272,2 92,305 protein:H:3~133 322,330~331,334~335 protein:I:1~242 22,24~25,318~320 protein:J:1~293 339~342 protein:K:17 177,208,240~244 |
|
| 4257 |
6ah0:F (5.7Å) |
69 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
30315277 | 1334 1124  1168 s59 M021_0.6 |
Assembly1 rna:H:3~184 85~95 rna:I:1~144 48~75 |
| 4258 |
6ah0:H (5.7Å) |
109 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
30315277 | 1212 1373 504 |
Assembly1 rna:F:1~107 3~12,14 rna:G:122~163 31~33,35~46 protein:p:3~96 163~167,170 protein:k:20~116 98,104~105 |
| 4259 |
6ah0:I (5.7Å) |
117 | GO:0017070 (F) U6 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005687 (C) U4 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00003F07BD | RF00015 | Homo sapiens 9606 |
30315277 |  s37 |
Assembly1 rna:F:1~107 1~17,21~22,55~64 protein:M:4~128 30~32 protein:P:26~114 119,144 protein:T:4~74 123,138 protein:U:7~83 124,127 protein:V:2~83 125~127 |
| 4260 |
6ah3:A (3.48Å) |
369 | EC:3.1.26.5 ribonuclease P GO:0004526 (F) ribonuclease P activity GO:0008033 (P) tRNA processing GO:0034965 (P) intronic box C/D snoRNA... GO:0030677 (C) ribonuclease P complex GO:0005655 (C) nucleolar ribonuclease ... |
URS0000413C32 | RF00009 | Saccharomyces cerevisiae S288C 559292 |
30262633 | Assembly1 protein:B:54~875 13~14,17~19,21~25,36~39,74,81~ 84,96~105,107,118,121,148~152, 155~157,187~189,191,195,197,25 8~259,266~270,292,295~296,299~ 300,303,305~308,312~313,324,34 5~347 protein:C:14~188 205~206 protein:D:77~279 6~8,170~171,177~179,363~365,36 9 protein:E:2~147 27,29~30,32~34,86,312~316,342 protein:F:2~158 26,44~47,67~71,77~79 protein:G:13~140 28~29,36~43,45,78~80,270~272,2 92,305 protein:H:3~133 322,330,334~335 protein:I:1~242 22~25,318~320 protein:J:1~293 340~342 protein:K:17~144 240,242,244 rna:T:-3~76 91,204,245,251,300,313~314,344 ,351 MG:A:401 91~93 MG:A:402 91,343~344 |
|
| 4261 |
6ah3:T (3.48Å) |
80 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000D77911 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
30262633 | Assembly1 rna:A:1~369 -2~1,17,19,55~56,65,73 protein:B:54~875 2~3,71~73 protein:D:77~279 47~48,50~52 protein:E:2~147 -3,-1~0 protein:J:1~293 -3,10~11,47,66~68 protein:K:17~144 19,56~57 MG:A:402 0~1 |
|
| 4262 |
6ahd:F (3.8Å) |
94 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00001EC8D7 | RF00026 | Homo sapiens 9606 |
30315277 | 1334 1124 s59 M021_0.6 |
Assembly1 protein:A:56~2316 27~28,38,44~49,51 protein:O:2~142 47,49 protein:M:5~128 71~72 protein:L:52~432 49~51,53~55 protein:J:436~672 55~56,66~67,78 protein:z:4~73 102~103 rna:I:1~144 50~51,53~65,67~75 rna:G:-12~163 29~36,38~44 rna:H:3~184 85~95 |
| 4263 |
6ahd:H (3.8Å) |
109 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
30315277 | 1212 1373 504 |
Assembly1 rna:F:1~105 3~12,14 rna:G:-12~163 31~33,35~46 protein:k:20~116 98,104~105 protein:p:3~96 163~167,170 protein:w:1~463 53~54 |
| 4264 |
6ahd:I (3.8Å) |
136 | GO:0017070 (F) U6 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005687 (C) U4 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00003F07BD | RF00015 | Homo sapiens 9606 |
30315277 |  995  1368 |
Assembly1 protein:A:56~2316 19,54 protein:N:6~941 19,40~41,48~49,52,54 protein:M:5~128 29~32,42~43 protein:L:52~432 16~18,20,29,32,39~41,51,53,56~ 57 protein:J:436~672 10~13,22~24,57 protein:P:26~114 126~128,144 protein:Q:4~74 119~120 protein:R:15~92 120~121 protein:S:4~76 121~122 protein:D:427~2125 71~79 rna:F:1~105 1~9,11~18,55~62 |
| 4265 |
6ahr:A (3.92Å) |
341 | EC:3.1.26.5 ribonuclease P GO:0004526 (F) ribonuclease P activity GO:0008033 (P) tRNA processing GO:0030677 (C) ribonuclease P complex |
URS000013F331 | RF00009 | Homo sapiens 9606 |
30454648 |  1165  1236  1314  837  953  M348_0.6  987  1333  s49  M151_0.6  M044_0.6  901  s53  s52  506  M070_0.6  s61  21 |
Assembly1 protein:B:100~1024 2~4,14~17,19~21,28~31,35,57~59 ,67,69~71,83~92,99,104,106~108 ,110,256~257,261~263,266~268,2 70~271,283~284,286,301~303,317 ~319,328,332 protein:C:19~238 143~145,180~183,220~222 protein:D:76~220 6~8,119,121~123,125,336~338 protein:E:2~148 73,272~276,315 protein:F:1~156 34,36~39,50~58,62 protein:G:9~139 28,30~35,37,64~66,265 protein:I:2~237 23,63,65 protein:J:2~248 312,314 protein:K:4~124 121,143~144,146~147,157,182~18 4,215~219,240~241,243~245 protein:L:2~363 278,289,291,307~308,310,328,33 9 |
| 4266 |
6ahu:A (3.66Å) |
341 | EC:3.1.26.5 ribonuclease P GO:0004526 (F) ribonuclease P activity GO:0008033 (P) tRNA processing GO:0030677 (C) ribonuclease P complex |
URS000013F331 | RF00009 | Homo sapiens 9606 |
30454648 | 1165 1236 1314 837 953 M348_0.6 987 1333 s49 M151_0.6 M044_0.6 901 s53 s52 506 M070_0.6 s61 21 |
Assembly1 protein:B:100~1024 2~4,14~17,19~21,28~31,35,58~59 ,69~70,82~92,99,105~109,256~25 7,260~263,266~268,270,283~285, 302~303,317~319,328,330,332 protein:C:19~238 143~146,149,181~183,221~222 protein:D:76~220 7~8,119~123,125,336~338 protein:E:2~148 73,272~276 protein:F:1~156 37~40,50~56,58 protein:G:9~139 27,31~35,37,64~66,265 protein:H:4~124 291,305 protein:I:2~237 63,65~66 protein:K:4~124 144,146~147,156,180,182~183,21 5~219,238,240~243 protein:L:2~363 278,289~291,306,308,310~311,33 9 rna:T:1~72 79,120,142,244,250,316~317,324 |
| 4267 |
6ahu:T (3.66Å) |
72 | GO:0030533 (F) triplet codon-amino aci... | URS0000E60B72 | RF00005 | Homo sapiens 9606 |
30454648 | 1334  M168_0.6 |
Assembly1 rna:A:1~341 1,19,54~56,65 protein:B:100~1024 1~3,72 protein:D:76~220 47,50~53,58~59 protein:J:2~248 10,47,67~68 protein:K:4~124 56~57 |
| 4268 |
6aso:I (2.71Å) |
70 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS0000D56C4E | RF00026 | Saccharomyces cerevisiae 4932 |
29717126 |  383 |
Assembly1 protein:A:30~398 36~37,39~44,46~55,57~58,91~92 protein:B:1~95 110~111,113 protein:C:1~79 112~113 protein:F:10~84 112~113 protein:H:2~108 110,113 K:I:202 59~60,86~87 MG:I:203 74~75 MG:I:204 40~41 |
| 4269 |
6awb:A (6.7Å) |
1443 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DDC0 | RF00177 | Escherichia coli 562 |
29027901 | Assembly1 protein:04:8~1376 1163,1168 protein:E:9~226 828~829,1072~1074,1099,1101~11 03,1157~1158 protein:F:1~206 1055~1060,1106~1108,1111~1112, 1189~1192,1204~1206,1256,1279 protein:G:1~205 5,8,26,29,401~407,413,417,426~ 430,439,508~509,511~512,541~54 6,613,617,619~621 protein:H:9~165 6~9,15~19,560,864,922,1070~107 1,1073,1078,1080,1398 protein:J:1~151 932,938~939,1092~1093,1239~124 0,1297~1298,1345~1346,1350~135 1,1372~1380 protein:K:1~129 586~589,597~599,642,824~825,87 5,877 protein:L:3~129 942~943,966,968,1117~1119,1128 ~1130,1147~1149,1178,1180,1184 ,1186~1187,1232~1233,1248~1250 ,1289~1291,1342~1350,1367~1368 ,1371~1373 protein:M:5~102 963,969,972~973,975,1060~1061, 1125~1126,1150~1152,1198,1253~ 1254,1279 protein:N:12~127 675~676,683~684,686,688~690,69 3~694,705~708,715~716,718,778, 797 protein:O:1~123 33~37,48~49,362~364,501~502,52 1,523,538,552~553,562,567,583~ 584,879~881,911~912 protein:P:1~114 949~951,1224~1228,1230,1302,13 08~1309,1321~1322,1328~1330 protein:Q:1~100 974,976,979~982,994,1007,1047~ 1048,1059~1060,1186~1187,1202~ 1203,1216~1217,1219,1257,1316~ 1317,1358~1359,1369 protein:R:1~88 579,656~659,666~668,727,739~74 3,749~755,764~765 protein:S:1~82 44,228~229,392,617,624~627 protein:T:3~82 564,585,596,645 protein:U:10~74 664,719~722 protein:V:2~80 956,958,986,1014,1220~1221,122 5,1310,1313~1314,1320~1321 protein:W:2~86 61,104~108,131~132,175~177,185 ~194,223~224,263~264,322~323,3 31~332 protein:X:4~68 718,733,1100,1167,1523,1526~15 28 |
|
| 4270 |
6awc:A (7.9Å) |
1443 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DDC0 | RF00177 | Escherichia coli 562 |
29027901 | Assembly1 protein:04:8~1376 1162~1163,1168 protein:E:9~226 828,1073,1099~1101,1103,1111,1 158 protein:F:1~206 1055~1060,1107~1108,1189~1191, 1204,1206,1256,1278~1279 protein:G:1~205 5,8,26,401~408,413,426~430,439 ,490,508~512,540,542~546,612~6 13,619~620 protein:H:9~165 7~10,16~19,559,864,1070~1071,1 073,1080~1081 protein:I:1~100 661~662,736 protein:J:1~151 932~933,938~939,1091~1093,1239 ~1240,1297~1298,1345~1346,1350 ~1351,1373~1378,1380 protein:K:1~129 586~587,589,597,642,824,877~87 8 protein:L:3~129 942,967,970,1117~1119,1129~113 0,1147~1149,1177~1178,1180,118 4,1186~1187,1231~1233,1248~125 0,1290,1342~1343,1347,1349~135 1,1367~1368,1370~1373 protein:M:5~102 963,973,975,1059~1061,1151,119 8,1253~1254,1278~1279 protein:N:12~127 675,683,686,689~691,694,705,70 7,715~716,718,1524 protein:O:1~123 34~36,49,362~364,501~503,521,5 23,537~538,550~553,562,583,585 ,879~881,884,911~912 protein:P:1~114 947~952,1224~1230,1296,1302,13 07~1310,1321~1322,1328~1330 protein:Q:1~100 974,977,979~981,994,1014,1047~ 1049,1188,1202,1217~1219,1316~ 1317,1358~1360 protein:R:1~88 580~581,656~659,666~668,727~72 8,739~742,749~751,753~754,764~ 765 protein:S:1~82 43,136,228~229,375,617,624~626 protein:T:3~82 596~597,636~637 protein:U:10~74 663,720,834~836,844~846 protein:V:2~80 956,958,986,1012,1014,1220~122 1,1225~1226,1313,1317~1322 protein:W:2~86 60~61,104~107,132,176~177,185~ 194,223~225,263~264,322~323,33 1 protein:X:4~68 718~719,723,1098~1100,1167,152 5~1528,1533 |
|
| 4271 |
6awd:A (8.1Å) |
1539 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DDC0 | RF00177 | Escherichia coli 562 |
29027901 | Assembly1 protein:E:9~226 829~830,1073,1096~1105,1111,11 58 protein:F:1~206 1055~1058,1060~1061,1106~1109, 1111~1112,1189~1190,1193,1204, 1206,1255~1256,1279 protein:G:1~205 2,5,8,26,28,402~404,407~408,42 6~427,429,439,509,511~512,542~ 547,612~613,619~621 protein:H:9~165 7~9,15~16,18~20,559~560,863~86 4,1070~1073,1078,1080~1081 protein:J:1~151 932,1239~1240,1291,1297~1298,1 345~1346,1350~1351,1372~1380,1 382 protein:K:1~129 586~591,597,599,642~643,653,82 4~827,875,877~878 protein:L:3~129 941~943,1117~1118,1130,1147~11 48,1177~1178,1180,1184,1186~11 87,1231~1234,1248~1250,1290~12 91,1342~1345,1347~1351,1367~13 69,1371~1372 protein:M:5~102 963,969,972,975,1060~1061,1124 ~1126,1150~1152,1198,1253~1254 ,1278~1279,1366~1367 protein:N:12~127 674~675,684,686,688~691,705,70 8,716,718 protein:O:1~123 35,363,501~503,520~523,537~538 ,551~553,562,564,568,583,879~8 81,910~913 protein:P:1~114 946~952,1226~1228,1230,1295~12 97,1302,1307~1309,1321~1322,13 28~1330 protein:Q:1~100 973~974,976~977,979~982,1014,1 048~1049,1186~1188,1202~1203,1 216~1217,1219,1316~1317,1358~1 360 protein:R:1~88 656~660,666~668,728,739~743,74 9~752,754 protein:S:1~82 110~111,228~230,309~310,392,60 7~608,615,624,626~627 protein:T:3~82 280,585,645 protein:U:10~74 719,735,835,845 protein:V:2~80 958,1014,1220~1223,1225,1310,1 313~1314,1317~1322 protein:W:2~86 104~105,107~108,131,184~187,18 9~193,224,259~260,263,322~323, 332,1456 protein:X:4~68 721~722,732~733,1167,1525~1527 |
|
| 4272 |
6az1:1 (2.7Å) |
1760 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000CBFF3E | RF01960 | Leishmania donovani 5661 |
29150609 | Assembly1 protein:A:22~246 1121,1123,1131~1132,1141~1144, 1167,1177~1180,1193~1194,1290~ 1292,1366,1369~1370,1408~1410, 1412~1416,2202~2203 protein:B:1~211 717~719,728,1287,1645~1648,167 2~1675 protein:C:2~213 628,1627~1630,1678~1685,1821~1 824,1828,1837~1839,1888~1889,1 891,1893,1903,1931~1932 protein:D:1~182 22,25,38~41,95,423~424,509,518 ~523,526~527,556~559,577,579~5 81,586,604,641~643,863~866,868 ~869,871~873 protein:E:2~261 92~94,109,118~123,288,290,294, 299~301,338~343,424~425,489~49 3,496~498,508,789,853~854,857~ 859,863~864,873~874,877,887~89 1,900 protein:F:44~263 1~7,10~11,13~15,1436,1449~1450 ,1497~1498,1643,1650,1653~1654 ,1826 protein:G:1~238 65~66,68,70~71,124~125,131,144 ~149,154~160,163~169,171~174,1 85,276~278,286,288~290,314~315 ,317~318,320~321,329,437~438,4 47~450,461~463,790,2092~2093,2 100~2101,2124~2125 protein:H:2~190 1515~1519,1722,1872~1874,1944~ 1945,1954,1992~1993,2004,2007~ 2008,2029~2036 protein:I:1~200 686~690,758~761,773,844~845,90 9~911,986~991,993~994,1104~110 6,1361~1362 protein:J:2~130 413,683,685~688,849~850,903,90 5~906,1107~1110,1281~1285,1447 ~1448,1450~1454 protein:K:2~216 99~100,103,193,242~245,304~308 ,310,361~362,366~367,372~378,3 80~383,385,392,397~398,428~429 ,435~436,439~443,2095~2096,213 2 protein:L:7~149 1511,1543,1545,1547,1689~1690, 1702,1722~1724,1761,1763,1777~ 1778,1811,1818~1819,1865~1867, 1883~1885,1944,1999~2007,2024~ 2026,2028~2030 protein:M:14~115 1546,1549~1551,1631~1634,1687, 1694~1696,1698,1780~1782,1830~ 1831,1933,2023~2024 protein:N:32~122 1569,1571~1572,1584,1609,1836, 1893 protein:O:8~144 1132~1134,1140~1142,1145~1151, 1153,1163~1166,1174~1176,1236~ 1238,1253~1255,2172,2188~2192 protein:P:1~142 18~19,28,30~31,354~355,395,402 ,478,614~621,624~625,648~650,6 58~661,663~665,671,682,1279,14 54~1457,1460,1485~1488,2157~21 58 protein:Q:27~141 1579~1581 protein:R:2~143 1525~1528,1858~1860,1862~1864, 1920,1951~1953,1957~1958,1963~ 1967,1977~1978,1983~1987 protein:S:4~57 1551~1552,1556~1558,1567,1569, 1596,1598,1621,1686,1820~1821, 1833~1834,1851~1853,1888,1972~ 1973,2014~2017 protein:T:2~143 675~677,913~916,995,1103,1105, 1107~1108,1112~1116,1125~1126, 1186,1188,1197~1203,1205~1214, 1281,1422 protein:U:5~160 110~113,245~248,294~297,347,34 9~352,368~372,379~380,382,390~ 391,395,416~417,660,839 protein:V:2~123 727,1364,1663,1667~1671,1682~1 684,1785~1791,1801~1803,1814 protein:W:22~135 1532~1535,1563,1593~1595,1853~ 1856,1859~1860,1967~1977,1979 protein:X:25~176 1709~1712,1714~1717,1720~1721, 1724,1761~1763,1767,1769,1868~ 1869,1877~1882,1913~1919,1921~ 1922,1937~1938,1940~1942,1948~ 1949,1961~1962,1982~1983,2010~ 2011,2021 protein:Y:3~90 1358~1360 protein:Z:3~129 54~55,57,83~85,152~155,164,485 ~487,498~499,503,505~507,565~5 71,576~578,581~583,868,878~879 ,882~883 protein:a:35~106 1718,1875,1947~1950,1952~1955 protein:b:2~104 1175,1177~1184,1189~1190,1276~ 1277,1425~1427,1441,1494,1504~ 1505,2047~2049,2169,2191~2203 protein:c:2~85 1110,1116~1118,1204~1206,1295~ 1297,1359~1362,1411,1419~1420 protein:d:21~85 1514,2034~2037,2039 protein:e:2~66 524~527,594,606~609,612,615~61 7,628,633~639,2159 protein:f:83~146 1581,1599~1600,1603~1605,1607, 1611 protein:g:1~309 1693,1809~1810 rna:2:1~76 626~627,1626,2159 rna:3:1~76 1248,1543,1863~1864,1995~1997, 2057 rna:4:1~76 1151,1997,2040 rna:5:1~12 626,1151,1502,1828,2054,2057~2 058,2158~2159,2164 PAR:1:2302 2062,2065,2155~2157,2159~2161 PAR:1:2303 1291,1420~1421 PAR:1:2304 1509,1511,1637~1639,1664,1815, 1818~1819 PAR:1:2305 22,24,646~649 PAR:1:2306 2067~2069,2149~2150,2152~2154 PAR:1:2307 366,2085~2086,2133 |
|
| 4273 |
6az1:2 (2.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E264 | RF00005 | Escherichia coli 562 |
29150609 | Assembly1 protein:e:2~66 36~37 rna:1:1~2203 34~37 rna:5:1~12 34~37 |
|
| 4274 |
6az1:3 (2.7Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
29150609 | Assembly1 protein:L:7~149 33,35 rna:1:1~2203 30~32,34,38~41 rna:5:1~12 34~37 |
|
| 4275 |
6az1:4 (2.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E264 | RF00005 | Escherichia coli 562 |
29150609 | Assembly1 protein:H:2~190 32~33,41 rna:1:1~2203 34~35,37 rna:5:1~12 35~36 |
|
| 4276 |
6az3:1 (2.5Å) |
1620 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000CBFF5D | RF02543 | Leishmania donovani 5661 |
29150609 | Assembly1 protein:A:2~255 872~875,911,947,955~956,960~96 5,967,976,1642,1663,1731 protein:B:2~403 925,929,1367 protein:C:4~369 206~207,246~249,251,258,368,37 6~381,383~384,386,395~397,403~ 406,496~500,505~508,539,552~55 3,567,569,572,574~576,584~590, 610~611,622~623,625,631~632,63 6,690~696,704~706,712~713,720~ 721,729~734,840~842,851,853~85 6,980,984,1417,1420,1472~1478, 1512,1516~1521,1528~1531 protein:F:20~195 492~495 protein:G:111~340 5~6,8~9,118,120~121,140~141,14 4~147,1668~1670 protein:H:2~222 461,663~664,1231~1233,1238~123 9,1248,1250~1251,1253~1254,136 7~1369,1374~1378,1380 protein:I:2~213 45~47,70~75,84,96~97,101~102,1 04~110,155,167,279,352,367~368 ,697,715~719,722,729,737~739,7 49~751,763,847~849,982~983,101 6~1017,1169 protein:K:61~209 529,1241~1242,1244,1390~1391 protein:L:2~145 36~38,68~69,83,86~88,92~95,320 ,342,672~674,693~695,742~743,7 47,752~754,763,765,768,843~845 ,848~850,853,987~990,993~995,1 009,1014~1018,1170~1172,1460~1 464,1518~1520,1522~1523 protein:M:2~204 7~8,17~18,26~33,41~43,47,53~56 ,60~63,65,67,77~80,98,113~117, 124~125,144,146~148,304~306,30 8,313~314,318~319,323~329,334, 340~342,356~359,367,696~697,73 0,959~960,1651~1656,1669 protein:N:2~203 1058,1060~1062,1091~1092,1094~ 1100,1182~1186 protein:O:3~264 1053~1054,1089~1090,1130~1133 protein:P:2~198 86,700~701,703~705,707~709,747 ,769~771,778~781,801~806,829~8 31,833,835~838,1000,1021,1025~ 1028,1159~1162,1166,1217,1413~ 1414,1441~1443 protein:Q:2~190 884,891~892,904~907,1555,1577~ 1581,1605,1752,1754~1756 protein:R:2~179 510~514,522,530~531,540,546~54 8,1238,1240~1241,1243~1246,127 3~1276,1356~1357,1378,1382~138 5,1390,1392 protein:S:2~155 598~599,1018,1040~1043,1045,11 02,1110~1114,1147~1148,1150~11 54 protein:T:2~155 429~430,439,453~455,930~931,93 4,1535,1538~1540,1562~1563,157 1~1574,1611~1612,1614~1615 protein:V:27~144 11~14,1627~1631,1670~1673,1731 ~1733,1761~1763 protein:W:2~122 185~186,188~189,191,235~237,25 0~255,261~264,375~376,416~417, 419,434~435 protein:Z:2~141 199,205~207,215~217,219,1421,1 424~1427,1436~1440,1445~1447,1 466,1477,1515~1516 protein:a:2~126 16,18,56,108,112,135,151,170,2 90 protein:b:2~69 757,772~773,802,808~811,825~82 9,1003~1006,1019~1021,1032,103 5,1116,1126~1129,1140,1174~117 5,1192~1196 protein:c:26~252 500,508~509,549~551,586~587,59 7~599,610,612,631,1034~1037,11 08,1154~1155,1157~1160,1195~11 96,1212~1216,1224~1228,1395,14 03~1404,1415,1452~1454 protein:e:64~182 1548~1553,1560~1562,1567~1569, 1583 protein:f:2~131 201~205,217~218,466~469,480,63 8,666~667,670~673,687~688,995~ 999,1201~1204,1218~1219,1408~1 410,1446~1447,1457,1478~1483,1 493~1499,1502~1503,1525 protein:g:20~144 470~475,492~493,560,563,645~64 7,653,663~666,1204~1206,1221~1 224,1234~1238,1396~1399 protein:h:3~127 1588,1590,1592~1595,1631,1634~ 1635,1741~1746,1748~1750,1759, 1773 protein:i:3~99 71,154,301~302,309~310,330~331 ,333~335,337,346~347,351~352,3 54 protein:j:2~81 20~23,51,273,368,393,399~404,8 63~870,935,954,971~973,980~981 ,1597~1598,1657 protein:k:2~77 1752~1753,1764~1771 protein:l:2~51 390~391,396,409,1596,1598~1602 ,1621~1622,1624,1740 protein:m:78~127 1269~1270,1361 protein:o:2~91 887~889,903~904,909~911 protein:p:2~97 42,90~92,314~315,320~321 rna:2:2~1601 38~41,69,92,313,321,328,341,34 3~350,460~464,668~669,674,676~ 685,747~749,762,818,826~828,85 6~860,869~870,881~882,911~912, 916,920,922~927,929~930,932~93 3,935~938,941~943,947,951,959, 964~967,969,972,975,988~991,10 06~1013,1018,1044~1046,1098~10 99,1105~1106,1109,1173,1180~11 82,1185~1193,1207~1209,1264~12 67,1364~1370,1372~1373,1528,15 35~1547,1549,1583~1603,1613,16 15~1616,1621,1628~1632,1634~16 37,1651~1653,1658~1659,1663,16 68~1669,1685,1721~1722,1732,17 57~1758,1760,1772~1782 rna:3:2~213 876,889~890,906~907,1640~1642, 1742~1744,1748~1752,1769~1770, 1780~1781 rna:4:1~183 222~230,455,457,461,1250~1251, 1270,1506,1546~1547 rna:5:1~133 1566,1570 rna:6:3~73 491~492,643~644 rna:7:1~169 3~21,57,142,184,273~275,369~37 7,379~382,385~386,389,391,408, 410,439,445~459,688~689,729,14 85~1486,1490,1511~1512,1533,16 37~1638,1670,1736~1737,1774~17 75,1777~1778 rna:8:3~120 1047~1049,1052,1103,1105~1107, 1213,1228,1258,1265 PAR:1:1801 773,804,834~835 PAR:1:1802 697~700,845 PAR:1:1803 1023,1163~1165 PAR:1:1804 471~472,658~659 PAR:1:1805 893~896,900~901 PAR:7:201 439,449,1488~1489,1507 MG:1:1811 692,1522 MG:1:1812 914,944 MG:1:1817 1615~1616 MG:1:1818 1586~1587 MG:1:1820 742,744 |
|
| 4277 |
6az3:2 (2.5Å) |
1078 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000CBFF59 | RF02543 | Leishmania donovani 5661 |
29150609 | Assembly1 protein:A:2~255 392~396,399~404,408~410,418~43 3,447~449,487~492,560,661,670~ 673,765~768,770~772,965~966,96 8~970,972~974,976~978,1035~103 6,1398~1400,1403,1405~1408 protein:B:2~403 69~72,92,586~588,612~613,620,6 37~641,1317~1322,1353~1355,137 7~1380,1382~1383,1385~1389,142 6~1430,1447~1448,1458~1459,149 9~1501,1514,1516~1517 protein:C:4~369 647~648,1253 protein:D:8~175 1091,1099~1105,1107~1112,1114 protein:E:2~187 1333,1337~1340 protein:G:111~340 682,757,759~760,769~775,777~78 0,783~784,796,800~803,967~968, 978,980~982,1006,1011~1015 protein:H:2~222 628~629,1324,1427,1436,1442,14 44~1447,1450,1464 protein:I:2~213 1203,1206~1207,1219~1220 protein:J:6~139 80~83,85,540~541,584~585,1319, 1355~1356,1369~1372 protein:L:2~145 1156,1191~1193,1213~1214,1216~ 1217,1226~1227,1238~1239 protein:M:2~204 411~412,414~415,670,761~762,10 25~1028,1036~1038 protein:N:2~203 1046,1063,1072,1074~1075,1267, 1275~1277,1291~1295,1303~1304 protein:O:3~264 1091,1115~1116,1131,1174~1179 protein:P:2~198 1148,1150~1151,1157~1159,1190, 1227~1229 protein:Q:2~190 43~44,47,55~57,98~100,122~126, 131~133,340~341,349,351~352 protein:S:2~155 1058~1062,1066,1075~1076,1126~ 1129,1133,1151~1153,1157,1164~ 1167,1184~1185 protein:T:2~155 29~30,597~603,634~636,1430 protein:U:2~122 126~129,347~348 protein:V:27~144 12~16,768~770 protein:Y:3~134 975~976,981~983,998~999 protein:b:2~69 1045~1046,1070,1149~1150,1166 protein:e:64~182 66~67,590~591 protein:h:3~127 16,38~42,819,969~970,974~976 protein:i:3~99 462,465~467 protein:j:2~81 27~28,34~35,384~385 protein:k:2~77 7~9 protein:l:2~51 15~17,24~26,31 protein:m:78~127 1285~1287,1334~1337,1346 protein:o:2~91 109~111,377,434~436,567,971 protein:p:2~97 471,667~668,1080~1084,1141~114 2,1144~1145,1169~1171,1183,118 8~1189,1194~1198,1200,1224~122 5,1230~1236,1241~1242 rna:1:3~1782 2~26,28,31~34,37~42,47~50,54~6 0,62~63,73~75,91~92,378~385,38 8,391~393,412~414,421,468~470, 570,592~593,599~609,612~627,63 0~632,643,648,654,656~661,666, 768~769,1026~1027,1029,1037,10 39,1042,1044,1046,1060~1066,10 69~1071,1074,1147~1149,1155~11 57,1192,1209,1213~1215,1217~12 24,1226~1227,1238~1242,1248,12 50~1254,1256,1264~1265,1267,12 73~1274,1294~1296,1299,1303~13 11,1323~1326,1377~1378,1389,13 96~1397,1417~1419,1422,1438~14 39 rna:3:2~213 4~5,42~43,132~133,347~348,978~ 979 rna:4:1~183 44~45,52~53,78~80,360~363,585, 587~588,590,631,1330~1331,1339 ~1341,1347~1349,1351,1372,1434 ~1436,1438,1446 rna:5:1~133 68~69,124~127,355~357,595,635~ 636,1430~1431 rna:6:3~73 1442~1444,1451~1452 rna:7:1~169 9,15,632~633,784,1012~1013,143 3~1434 PAR:2:1702 406,411,413~414,416,672,1023~1 025 PAR:2:1703 405~406,418~420,764~765,1023~1 024 PAR:2:1704 447,664,668,1032~1033 PAR:2:1705 520~521,551~553,556 |
|
| 4278 |
6az3:4 (2.5Å) |
183 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000037206E | RF02543 | Leishmania donovani 5661 |
29150609 | Assembly1 protein:B:2~403 28,30~33,37~39,65~67,72~77,114 ~115,118,124~127,164~167,175~1 80 protein:E:2~187 48,52~54,60,62~63,136~142,150~ 152,154~155 protein:H:2~222 24~25,34~37,131,161~163,174,18 1~183 protein:J:6~139 44~45,67~71,120~122 protein:Q:2~190 93,95~97 protein:T:2~155 5~6,8~9,13 protein:X:1~65 78~80,113 protein:e:64~182 84~86,102~104,107 protein:m:78~127 135~137,148~149 rna:1:3~1782 7~17,20,105~106,133,143,159,17 0 rna:2:2~1601 41~43,52~54,56~60,81~82,84,90~ 94,105,107~111,117~118,121,133 ~134,157~159,170,172~174 rna:3:2~213 97~98 rna:5:1~133 3,22,27,87~88,112~114,180~181 rna:6:3~73 1,23 |
|
| 4279 |
6az3:7 (2.5Å) |
163 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A76380 | RF00002 | Leishmania donovani 5661 |
29150609 | Assembly1 protein:C:4~369 20~21,25~27 protein:G:111~340 162~169 protein:I:2~213 27~30 protein:M:2~204 152~154 protein:T:2~155 3~4,10~13 protein:V:27~144 100,112,122~124,142~143,147,16 0~163 protein:W:2~122 22~24,70~75,83~85,90~91 protein:a:2~126 34~38,49~50,60~65,78~79,86~87, 95~96 protein:j:2~81 32,35~36,40~43,57~58,93~94,99, 102~103,109~110 protein:l:2~51 45,50~53,75,112 rna:1:3~1782 4~21,23~37,40~41,53~54,68,94,1 03,105,107~109,111,114,127,139 ~140,151~156,159~163,165~169 rna:2:2~1601 1~3,112,125,164,166,168 rna:4:1~183 9~10 PAR:7:201 9~12 |
|
| 4280 |
6az3:8 (2.5Å) |
118 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000047B859 | RF00001 | Leishmania donovani 5661 |
29150609 | Assembly1 protein:D:8~175 18,20,29~31,41~42,44~46,53,56~ 59 protein:N:2~203 65~66,93 protein:O:3~264 7~10,12~13,15~17,28~29,35~38,4 6~52,67~68,112,115~117 protein:R:2~179 77,92~97,100~101 protein:S:2~155 11,70 protein:c:26~252 84~87,97~99 rna:1:3~1782 79~82,86,90,100,102~105 |
|
| 4281 |
6b19:C (4.5Å) |
19 | GO:0000049 (F) tRNA binding | URS0000D56C30 | RF00375 | Human immunodeficiency virus 1 11676 |
29695867 | Assembly1 rna:D:59~77 181~199 |
|
| 4282 |
6b19:D (4.5Å) |
19 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000D56C47 | RF00005 | Homo sapiens 9606 |
29695867 | Assembly1 rna:C:181~199 59~77 |
|
| 4283 |
6b4v:A (3.4Å) |
1507 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A763A8 | RF00177 | Thermus thermophilus HB27 262724 |
29366636 | Assembly1 rna:B:6~2897 702,783~784,899,1407~1410,1418 ~1419,1429,1443,1473,1483~1484 ,1493~1497,1517 rna:HA:13~23 530,926,1054,1196,1400~1401,14 03,1492~1494,1498,1503,1505 rna:IA:1~76 790,966,1230,1338~1340,1400 protein:E:2~276 773~774 protein:L:1~122 339,1422~1423 protein:Q:1~137 345~346,1431~1432,1443,1446,14 63~1465 protein:JA:101~358 518~519,531,955~956,1051,1054, 1196,1492~1493 protein:KA:7~240 829,1073~1075,1099~1105,1160 protein:LA:2~207 421,532,1055~1062,1106~1109,11 11~1112,1189~1192,1205~1206,12 55,1257 protein:MA:2~209 8,26,400~413,426~430,436~438,4 89~490,508~509,511~512,541~546 ,612~613,619~620 protein:NA:5~155 6~9,15~16,18~19,559~560,864,92 1~922,1070,1073~1074,1078~1081 ,1193~1194,1397~1398 protein:OA:1~101 673~674,710~711,736~738 protein:PA:2~156 932~933,935,938~940,1239~1241, 1290~1292,1297~1298,1346,1350~ 1351,1373~1381 protein:QA:1~138 4,564,586~587,590~591,597~600, 640~644,653,755~756,823~828,86 0~861,874~878 protein:RA:2~128 942~943,967,1117~1118,1128~113 1,1147~1148,1178,1186~1187,123 2~1233,1248~1251,1291~1292,134 2~1350,1366~1373 protein:SA:3~100 963~964,969,972~973,975,1059~1 061,1123~1126,1150~1153,1189,1 198~1199,1202,1254,1279~1280,1 366~1368 protein:TA:11~126 675~677,684~686,688~692,695,70 6~708,716,718,778~780,797~798, 1523~1525 protein:UA:5~126 33~36,362~363,500~503,519~523, 526,528~529,537~539,552~554,56 2~564,567~568,585,880~882,911, 1492 protein:VA:2~118 947~954,1225~1229,1296~1297,13 01~1302,1307~1310,1328~1331 protein:WA:2~61 973~976,979~982,994~995,1016,1 048~1049,1060,1114,1187~1188,1 202~1203,1216~1219,1316~1317,1 357~1360 protein:XA:2~89 579~580,582,656~660,667~668,72 8,739~742,750~751,753~755,808 protein:YA:1~83 43~44,110~112,134~137,228~229, 309~311,375~377,390~393,450,45 2~453,467~468,474,608,617,624~ 627 protein:ZA:2~100 127~128,129A,130,189~190,234~2 38,246~247,253~256,264~265,267 ,275~280,564,583,635~636,760 protein:AB:19~88 663~664,673~674,718~720,734~73 6,835~836 protein:BB:2~84 955,957~958,986,1014,1220~1222 ,1225~1227,1312~1314,1316~1321 protein:CB:8~106 103~105,107~108,132,175~176,18 4~185,186A,186B,186C,191F,191G ,192~196,259~263,322~325,332~3 33,1438~1439,1453~1455,1459~14 60 protein:DB:2~25 1235~1236,1244~1245,1261,1269~ 1270,1288,1304~1305,1325~1331, 1352 MG:A:1609 414,427~428 MG:A:1621 20~21 MG:A:1624 1452~1453 MG:A:1625 12,21 MG:A:1637 297~298 MG:A:1638 52,316 MG:A:1639 857,868 MG:A:1658 416~417 MG:A:1670 1278~1279 MG:A:1672 296~297 MG:A:1673 56,352 MG:A:1674 710~711 MG:A:1691 1029,1032C MG:A:1695 111~112 MG:A:1712 314,318 MG:A:1719 346~347 MG:A:1733 466~467 MG:A:1739 560,566 MG:A:1742 366,394 MG:A:1748 244,893 MG:A:1758 614~615 MG:A:1759 1086,1390 MG:A:1762 720~721 MG:A:1770 324,328 MG:A:1776 575~576 MG:A:1783 883,906 MG:A:1786 129A,129B MG:A:1789 1144,1146 MG:A:1794 773~774 MG:A:1810 7,298 MG:A:1814 1160~1161 |
|
| 4284 |
6b4v:B (3.4Å) |
2880 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A76375 | RF02541 | Thermus thermophilus HB27 262724 |
29366636 | Assembly1 rna:A:4~1533 1702~1704,1836~1837,1846,1848, 1895,1912~1916,1919~1920,1947~ 1949,1959~1961,2864 rna:C:1~119 861~863,915~919,1026~1027 rna:D:1~76 1852,2112,2169,2394~2395,2421~ 2422 rna:IA:1~76 1907~1909,1922~1924,2252~2253, 2450~2451,2585,2602 protein:E:2~276 690~694,705,727~729,764,773~77 4,779~782,784,1354~1355,1371,1 427,1490~1491,1500~1501,1566~1 569,1695,1788~1792,1795~1801,1 803~1807,1812~1820,1823~1830,1 842~1845,1901~1903,1971~1972,2 073,2075,2085~2086,2207~2208,2 218~2219,2224,2227~2228,2239,2 439,2588,2591,2598~2599 protein:F:1~204 574,745,1130,1654~1658,1670,16 75,1993~1994,1998,2025,2050~20 54,2511~2513,2571~2572,2574~25 75,2578~2580,2618~2621,2633,26 35~2638,2679~2682,2723~2724,27 28~2730,2733,2772~2774,2784~27 87,2810~2811,2820~2823,2830~28 31 protein:G:6~207 38~39,320~323,441~444,449,451~ 452,469,586~590,598,600~601,60 5~608,615~617,618A,618B,619~62 0,659~661,671~675,797~798,801, 1202,1205,1246~1248,1255~1258, 2059~2061,2443~2445 protein:H:2~182 2303~2308,2310~2316 protein:I:2~175 1035,1111,2529~2531,2657~2660, 2666~2668,2745~2751,2757~2758, 2761 protein:J:1~146 270M,270N,270R,2093~2094,2198~ 2199 protein:K:1~140 7~8,528,537,557~558,995,1005~1 009,1012,1022,1131,1137~1141,1 143,2039~2040,2640~2642,2768,2 780 protein:L:1~122 1664~1667,1669,1952,1995~1996, 2547,2561~2563,2566,2674~2675, 2683~2685,2726~2727 protein:M:1~150 195~196,244~246,249~252,389,41 1,566~568,587~589,598,604,625~ 627,631,636~637,661~664,666,67 1~672,805~807,810~811,813~814, 825~826,831~833,942~943,1189~1 191,1203,1242~1245,1249~1250,2 358,2360,2393~2394,2404~2406,2 413,2415~2417,2428~2429 protein:N:1~141 861~864,868,870~871,873,905~90 8,910~912,954~958,1029~1030,22 50~2251,2275~2278,2467~2470,24 82~2485,2495~2496 protein:O:1~118 1275~1279,1287~1288,1294~1295, 1327,1454~1455,1649~1654,2000~ 2002,2009,2690,2705~2708,2713, 2722~2723,2816~2818,2820~2822, 2839~2840,2850~2852,2869~2870, 2873,2880~2882 protein:P:3~112 2292~2296,2319,2334~2335,2376~ 2379 protein:Q:1~137 1753~1755,2682~2684,2718,2845~ 2849,2865,2867,2875~2876 protein:R:2~118 17~20,29~30,443~446,532~536,55 9~561,563~564,580~581,583~584, 812,977,992~998,1009~1012,1151 ~1154,1156,1198~1199,1215~1220 ,1226~1227,1248,1251~1252,2018 ,2020 protein:S:1~101 548,565~566,573,814~815,992~99 4,996,1160~1163,1187,1223~1226 protein:T:1~112 23~25,486~487,489,491,493~496, 508,518,747~748,751,1261~1262, 1266,1322~1323,1614~1615,2009~ 2015 protein:U:1~95 58,64~65,72,137B,138,141B,142~ 143,456,1311~1312,1336~1342,13 92,1398~1399,1598~1600 protein:V:1~107 83~87,106,295~298,300,302,307, 309,328~329,335~336,480~481,48 3~484,498 protein:W:1~189 873,875,896,904 protein:X:2~85 855~858,922~923,2251~2253,2256 ,2261~2262,2264,2270~2271,2277 ~2280,2329~2331,2334,2336,2352 ~2357,2364~2366,2384~2387,2450 ~2451,2495 protein:Y:2~98 153,154A,189,270J,270S,270T,37 2,380~381,387~388,396~397,1364 ~1365,2079~2080,2090~2091,2205 ,2213,2228,2230~2232,2395~2396 ,2432 protein:Z:1~70 61,72,75~77,94~96,98,101~102,1 11 protein:AA:1~60 849~852,931,933,969~970,987~98 9,1157~1158,1184 protein:CA:2~60 14~17,516~517,747,1262~1264,12 66,2015~2019,2021,2045~2046,20 54~2057,2505,2576~2577,2611~26 12,2614~2615,2624,2814~2816,28 83~2886 protein:DA:2~54 643,2284~2286,2344~2348,2371~2 372,2401,2419~2421 protein:EA:1~48 53~54,124~126,457~459,464~469, 683~688,752,770~771,1309~1311, 1367~1368,1378,1612~1613,1619~ 1620 protein:FA:2~65 241~245,247,249~251,253~254,59 1~593,629~631,650~651,667,833~ 835,938,2349~2351,2359~2362,23 65,2390,2392~2393,2418~2420,24 22 protein:GA:1~37 1031,1123~1125,2466~2467,2477~ 2478,2526~2527,2741~2743,2753~ 2757 protein:JA:101~358 2452,2492~2493,2506~2508,2553~ 2555,2557,2573,2584~2585,2602 protein:XA:2~89 714~716 BLS:B:9001 2251~2252,2439,2601~2602 MG:B:9012 749,1269 MG:B:9016 1699,1763 MG:B:9020 1784,1981 MG:B:9026 1649~1650 MG:B:9032 2850,2865 MG:B:9044 778~779 MG:B:9053 192,2242 MG:B:9061 2720~2722 MG:B:9067 1244~1245 MG:B:9068 1785,1981~1982 MG:B:9074 2446,2502 MG:B:9077 505,1236 MG:B:9079 1968,2593 MG:B:9081 2218~2219,2224 MG:B:9093 971~972,974B,983 MG:B:9095 1703~1704 MG:B:9104 618A,618B MG:B:9115 782~783,1787 MG:B:9121 26~27 MG:B:9123 465,788 MG:B:9128 2092~2093 MG:B:9133 947~948,969 MG:B:9137 1528,1542 MG:B:9153 2351~2352 MG:B:9171 447~448 MG:B:9179 1605~1606 MG:B:9202 11,2629 MG:B:9207 730,760~761,1775 MG:B:9213 768~769 MG:B:9219 1055~1056 MG:B:9220 2726~2727 MG:B:9235 1519~1520 MG:B:9244 1008~1009 MG:B:9252 476,478 MG:B:9253 1491~1492 MG:B:9255 1352,1375 MG:B:9266 606,620 MG:B:9269 1271,1325 MG:B:9277 1171,1173 MG:B:9278 2717~2718 MG:B:9279 1479~1480 MG:B:9282 577~578,1253 MG:B:9301 392,409 MG:B:9343 270I,270J MG:B:9351 1020,1034,1122 MG:B:9353 938~939 MG:B:9361 2435~2436,2597 MG:B:9365 1118~1119 MG:B:9370 2254~2255 MG:B:9376 2644~2645 MG:B:9377 2571,2573~2574 MG:B:9388 2391,2427 MG:B:9400 363F,363G MG:B:9409 1801,2206 MG:B:9411 1753,1756 MG:B:9416 829~830 MG:B:9420 273B,273C MG:B:9421 1250~1251 MG:B:9425 913~915 MG:B:9433 1941~1942 MG:B:9463 136,137A MG:B:9469 1368~1369 MG:B:9483 1063~1064 MG:B:9488 279~280 MG:B:9506 2548~2549 MG:B:9509 2794~2795 MG:B:9510 270H,270I MG:B:9518 270M,270N MG:B:9521 362,363A MG:B:9531 763,1430 MG:B:9539 2304,2311 MG:B:9553 1674,1989~1990 MG:B:9555 908~909 MG:B:9557 2584~2586 MG:B:9558 1319,1330 MG:B:9562 137A,139 |
|
| 4285 |
6b4v:C (3.4Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFF2 | RF00001 | Thermus thermophilus HB27 262724 |
29366636 | Assembly1 rna:B:6~2897 78~81,88,96~97,99~100 protein:H:2~182 31,41~45,55,57 protein:N:1~141 90~91 protein:P:3~112 7~9,27~29,37~38,47~52,113~116 protein:W:1~189 73~77,92,102~105 protein:X:2~85 11~12 protein:AA:1~60 83~84 protein:BA:1~69 40,43~44 MG:C:206 22~23 MG:C:211 24,56 MG:C:215 40~41 MG:C:216 20~21 MG:C:217 82~83 |
|
| 4286 |
6b4v:D (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli K-12 83333 |
29366636 | Assembly1 rna:B:6~2897 19,56,72,76 protein:Y:2~98 73~75 protein:PA:2~156 31~32,40~41 |
|
| 4287 |
6b4v:EB (3.4Å) |
1507 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A763A8 | RF00177 | Thermus thermophilus HB27 262724 |
29366636 | Assembly2 rna:FB:6~2897 702,784,899,1407~1408,1418,142 9,1443,1473~1475,1483~1484,149 3~1496,1517 rna:LC:13~23 530,926,1054,1196,1400~1401,14 03,1492~1493,1498,1503,1505 rna:MC:1~76 790,966,1230,1338~1340,1400 protein:IB:2~276 773~774 protein:UB:1~137 346,1432,1446,1464 protein:NC:101~358 518~519,531,956,1054,1492~1494 protein:OC:7~240 829,1073~1075,1099~1105,1160 protein:PC:2~207 421,532,1055~1062,1106~1109,11 11~1112,1189~1192,1205~1206,12 55,1257 protein:QC:2~209 8,401,403,405~413,426~430,437~ 438,489~490,508~509,511~512,54 1~546,612~613,619~620 protein:RC:5~155 6~9,15~16,18~19,559~560,864,92 1~922,1070,1073~1074,1078~1081 ,1193,1397~1398 protein:SC:1~101 673~674,710~711,736~738 protein:TC:2~156 932~933,935,938~940,1239~1241, 1290~1292,1297~1298,1346,1350~ 1351,1373~1381 protein:UC:1~138 4,564,586~587,590~591,597~600, 640~644,653,755~756,823~828,86 0~861,874~878 protein:VC:2~128 942,967,1117~1118,1128~1131,11 47~1148,1178,1186~1187,1232~12 33,1248~1251,1291~1292,1342~13 50,1366~1373 protein:WC:3~100 963~964,969,972~973,975,1059~1 061,1123~1126,1150~1153,1189,1 198~1199,1202,1253~1254,1279~1 280,1366~1368 protein:XC:11~126 675~677,684~686,688~692,695,70 6~708,716,718,778~780,797~798, 1523~1525 protein:YC:5~126 33~36,362~363,500~503,519~523, 526,528~529,537~539,552~554,56 2~564,567~568,585,880~882,1492 protein:ZC:2~118 947~954,1225~1229,1296~1297,13 01~1302,1307~1310,1328~1331 protein:AD:2~61 973~976,979~982,994~995,1048~1 049,1059~1060,1114,1187~1188,1 202~1203,1216~1219,1316~1317,1 357~1360 protein:BD:2~89 579~580,582,656~660,667~668,72 8,739~742,750~751,753~755,808 protein:CD:1~83 43~44,110~112,134~137,228~229, 309~311,375~377,390,392~393,45 0,452~453,467~468,474,608,617, 624~627 protein:DD:2~100 127~128,129A,130,189~190,234~2 38,246~247,253~256,264~265,267 ,273,275~280,564,583,635~636,7 60 protein:ED:19~88 663~664,673~674,718~720,734~73 6,835~836 protein:FD:2~84 955,957~958,986,1014,1220~1222 ,1225~1227,1312~1314,1316~1321 protein:GD:8~106 103~105,107~108,132,175~177,18 4~185,186A,186B,186C,191F,191G ,192~196,259~263,322~325,332,1 438~1439,1453~1455,1459~1460 protein:HD:2~25 1235~1236,1244~1245,1261~1262, 1267,1269~1270,1285,1288,1305, 1325~1328,1352~1353 MG:EB:1603 1173~1174 MG:EB:1612 382~383 MG:EB:1615 251,269 MG:EB:1623 557~558 MG:EB:1624 347~348 MG:EB:1643 109,111 MG:EB:1646 588,644 MG:EB:1653 890,904 MG:EB:1655 484~485 MG:EB:1661 323~324,328 MG:EB:1663 1294~1295 MG:EB:1668 693~694 MG:EB:1671 1162~1163 MG:EB:1690 608~609 MG:EB:1700 148,172 MG:EB:1704 182~183 MG:EB:1708 191D,191E MG:EB:1712 1273~1274 MG:EB:1717 741~742 MG:EB:1719 1061,1190 MG:EB:1725 191D,191E MG:EB:1731 780,800 MG:EB:1737 191C,191D MG:EB:1739 931~932 MG:EB:1743 255,266 MG:EB:1751 464~465 MG:EB:1761 558~559 MG:EB:1764 1069,1388 MG:EB:1766 1200~1201,1204 MG:EB:1767 944,1231 MG:EB:1777 191C,191D MG:EB:1782 6,299 MG:EB:1797 347~348 MG:EB:1805 915~916 |
|
| 4288 |
6b4v:FB (3.4Å) |
2880 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A76375 | RF02541 | Thermus thermophilus HB27 262724 |
29366636 | Assembly2 rna:EB:4~1533 1689,1700~1704,1832,1837,1848, 1912~1913,1919~1920,1947,1959~ 1960,2863~2864 rna:GB:1~119 861~863,915~919,1026~1027 rna:HB:1~76 1852,2112,2169,2394~2395,2421~ 2422 rna:MC:1~76 1907~1909,1922~1924,2251~2253, 2450~2451,2585,2602 protein:IB:2~276 690~692,694,705,727~729,764,77 3~774,779~782,784,1354~1355,14 27,1490~1491,1500~1501,1566~15 69,1695,1788~1792,1795~1801,18 03~1807,1811~1820,1823~1830,18 42~1845,1901~1902,1971~1972,20 73,2075,2085~2086,2207~2208,22 18~2219,2224,2227~2228,2239,25 88,2590~2591,2598~2599 protein:JB:1~204 574,745,1130,1654~1658,1670,16 75,1993~1994,1998,2025,2050~20 54,2506,2511~2513,2571~2572,25 74~2575,2578~2580,2618~2621,26 33,2635~2638,2679~2683,2723~27 24,2729~2730,2733,2772~2774,27 84~2787,2810~2811,2820~2823,28 30~2831 protein:KB:6~207 38,319~323,441~444,449,451~452 ,469,586~590,598,600~601,606~6 08,615~617,618A,619,659,673~67 5,797~798,801,1202,1205,1244,1 246~1248,1255~1258,2059~2061,2 444~2445 protein:LB:2~182 2303~2308,2310~2316 protein:MB:2~175 1035,1111,2529~2531,2657~2660, 2666~2668,2745~2751,2757~2758, 2761 protein:NB:1~146 270O,2092~2094,2198~2199 protein:OB:1~140 7~8,528,537,557~558,995,1005~1 009,1012,1022,1131,1137~1141,1 143,2039~2040,2640~2642,2768,2 780 protein:PB:1~122 1664~1667,1669,1952,1995~1996, 2547,2561~2563,2566,2674~2675, 2683~2685,2726~2727 protein:QB:1~150 195~196,244~246,249~251,389,41 1,566~568,587~589,598~599,604, 625~627,631,636~637,661~664,66 6,670~672,805~807,810~811,813~ 814,825~826,831~833,942~943,11 89~1191,1203,1242~1243,1245,12 49~1250,2358,2360,2393~2394,24 04~2406,2413,2415~2417,2428~24 29 protein:RB:1~141 861~864,868,870~871,873,905~90 8,910~912,954~958,1029~1030,22 50~2251,2275~2278,2467~2470,24 82~2485,2495~2496 protein:SB:1~118 1275~1279,1287~1288,1294~1295, 1327,1453~1455,1649~1654,2001~ 2002,2009,2690,2705~2708,2713, 2722~2723,2816~2818,2820~2822, 2838~2840,2850~2852,2869~2870, 2873,2880~2882 protein:TB:3~112 2292~2296,2319,2334~2335,2376~ 2379 protein:UB:1~137 1753~1755,2682~2684,2718,2845~ 2849,2865,2867,2875~2876 protein:VB:2~118 17~20,29~30,443~446,532~536,55 9~561,563~564,580~581,583~584, 812,992~998,1009~1012,1151~115 4,1156,1198~1199,1215~1218,122 0,1226~1227,1248,1251~1252,201 8~2020 protein:WB:1~101 548,564~566,573,814~815,992~99 4,996,1160~1163,1187,1223~1226 protein:XB:1~112 23~25,486~487,489,491,493~496, 508,518,748,751,1261~1262,1266 ,1322~1323,1614~1615,2009~2015 protein:YB:1~95 58,64~65,72,137B,138,141B,142~ 143,456,1311~1312,1336~1342,13 92,1398~1399,1598~1600 protein:ZB:1~107 83~87,106,295~298,300,307,309~ 310,328~329,335~336,338,480~48 1,483~484,498 protein:AC:1~189 873,875,896,904 protein:BC:2~85 855~858,922~923,2251~2253,2256 ,2261~2264,2270~2271,2277~2280 ,2329~2331,2334,2352~2357,2363 ~2366,2384~2387,2450~2451,2495 protein:CC:2~98 153,154A,189,200,270J,270S,270 T,372,380~381,387~388,396~397, 1364~1365,2079~2080,2090~2091, 2205,2213,2228,2230~2232,2395~ 2396,2432 protein:DC:1~70 61,72~73,75~77,94~96,98,101~10 2,111 protein:EC:1~60 849~852,931,933,969~970,987~98 9,1157~1158,1184 protein:GC:2~60 14~17,516~517,747,1262~1264,12 66,2015~2019,2021,2045~2046,20 54~2057,2505,2576~2577,2611~26 12,2614~2615,2623~2624,2814~28 16,2883~2886 protein:HC:2~54 643,2284~2286,2344~2348,2370~2 372,2401,2419~2421 protein:IC:1~48 53,124~126,457~459,464~469,683 ~688,752,770~771,788,1309~1311 ,1367~1368,1378,1612~1613,1619 ~1620 protein:JC:2~65 241~245,247,249~251,253~254,59 1~593,629~631,650~651,667,833~ 835,938,2349~2351,2359~2362,23 65,2390,2392~2393,2418~2420,24 22 protein:KC:1~37 1031,1123~1125,2466~2467,2477~ 2478,2526~2527,2741~2743,2753~ 2757 protein:NC:101~358 1914~1915,2452,2493~2494,2507~ 2508,2554~2555,2557,2573,2585, 2602 protein:BD:2~89 714~715 BLS:FB:9001 2063~2064,2251~2252,2439,2601~ 2602 MG:FB:9003 2505,2581,2610 MG:FB:9009 2720~2722 MG:FB:9011 1674,1989 MG:FB:9024 2446,2502 MG:FB:9029 2490~2491 MG:FB:9030 2218~2219 MG:FB:9037 270R,270S MG:FB:9049 700~701 MG:FB:9051 2837,2878 MG:FB:9074 2274,2276 MG:FB:9080 1944,1955 MG:FB:9081 270L,270M MG:FB:9082 2070,2244 MG:FB:9093 447~448,472~473 MG:FB:9105 576,2501,2503 MG:FB:9125 1864,1869 MG:FB:9131 760,1775 MG:FB:9135 854,921~922 MG:FB:9140 508~509 MG:FB:9151 270E,270F MG:FB:9161 2100~2101 MG:FB:9162 711~712 MG:FB:9167 749,1269~1270 MG:FB:9172 1849~1850 MG:FB:9176 1361~1362 MG:FB:9181 1839,1897 MG:FB:9200 625~626,656 MG:FB:9201 196~198 MG:FB:9204 613~614 MG:FB:9212 2212,2215 MG:FB:9213 782~783,1778,1787 MG:FB:9214 2304,2310 MG:FB:9217 270J,270K,270Q,270R MG:FB:9218 273F,273G MG:FB:9225 1815~1816 MG:FB:9239 644~646 MG:FB:9258 270S,270T MG:FB:9259 2390~2391,2427 MG:FB:9260 2573~2575 MG:FB:9268 1656,2050 MG:FB:9274 128~129 MG:FB:9282 2672~2673 MG:FB:9288 28,448 MG:FB:9297 388,390 MG:FB:9315 505,1235 MG:FB:9317 2747,2754 MG:FB:9323 887~888 MG:FB:9330 1835,1900 MG:FB:9336 2255~2256 MG:FB:9340 2424~2425 MG:FB:9344 1271~1272 MG:FB:9351 2068~2069 MG:FB:9361 270U,270V MG:FB:9365 940~941 MG:FB:9372 1132,2515~2516 MG:FB:9374 1205~1206 MG:FB:9392 661~662 MG:FB:9398 1673,2552,2554 MG:FB:9415 363G,404 MG:FB:9416 562,2036 MG:FB:9423 10~11,2801 MG:FB:9442 1170,1180 MG:FB:9444 1889~1890 MG:FB:9452 190~191 MG:FB:9461 2024,2034 MG:FB:9463 2488~2490 MG:FB:9468 2816~2818 |
|
| 4289 |
6b4v:GB (3.4Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFF2 | RF00001 | Thermus thermophilus HB27 262724 |
29366636 | Assembly2 rna:FB:6~2897 78~81,88,96~97,99~100 protein:LB:2~182 31,34,41~45,55,57 protein:RB:1~141 90~91 protein:TB:3~112 7~9,27~29,37~38,47~52,113~116 protein:AC:1~189 73~77,92,102~105 protein:BC:2~85 11~12 protein:EC:1~60 83~84 protein:FC:1~69 40,43~44 MG:GB:204 57~58 |
|
| 4290 |
6b4v:HB (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli K-12 83333 |
29366636 | Assembly2 rna:FB:6~2897 19,56,72,76 protein:CC:2~98 73~75 protein:TC:2~156 40~41 protein:XC:11~126 39~40 MG:HB:101 19,57 MG:HB:104 61~62 MG:HB:105 70~71 |
|
| 4291 |
6b4v:IA (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli K-12 83333 |
29366636 | Assembly1 rna:A:4~1533 30~32,34,38~41 rna:B:6~2897 11~13,24~25,74~76 rna:HA:13~23 34~37 protein:H:2~182 19,56 protein:X:2~85 1~2,72~76 protein:JA:101~358 36~37,73~76 protein:RA:2~128 32~33,35 BLS:B:9001 74,76 |
|
| 4292 |
6b4v:MC (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli K-12 83333 |
29366636 | Assembly2 rna:EB:4~1533 30~31,34,38~41 rna:FB:6~2897 11~13,24~25,74~76 rna:LC:13~23 34~37 protein:LB:2~182 19,56~57 protein:BC:2~85 1~2,72~76 protein:NC:101~358 36,74~76 protein:VC:2~128 32~33,35 BLS:FB:9001 74,76 MG:MC:101 49~50 MG:MC:105 71~72 |
|
| 4293 |
6bfb:X (2.82Å) |
54 | GO:0010181 (F) FMN binding | URS000080DF4D | RF00050 | Fusobacterium nucleatum 851 |
29412640 | Assembly1 rna:Y:57~112 1~9,12~13,19,21~25,29~35,37~43 ,46~53 DKM:X:500 10,47~48 |
|
| 4294 |
6bfb:Y (2.82Å) |
56 | GO:0010181 (F) FMN binding | URS000080E20B | RF00050 | Fusobacterium nucleatum 851 |
29412640 | Assembly1 rna:X:1~54 57~64,70,72~76,81~85,89~95,101 ,103~112 DKM:X:500 61~62,85 |
|
| 4295 |
6bk8:2 (3.3Å) |
135 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS000023C730 | RF00004 | Saccharomyces cerevisiae 4932 |
29146870 | Assembly1 rna:6:1~102 3~14,16~17,21~23,26~30 rna:i:1~1118 33~34,36~39,41~47 protein:A:126~2106 19~25,27,29~31 protein:H:2~175 20~21 protein:P:476~1145 31~33 protein:R:92~215 5,15~19 protein:S:2~253 25,30 protein:k:4~100 100~101,1148~1149 protein:o:4~85 1094~1095,1129 protein:p:1~106 101~102 protein:r:28~111 1106~1108,1138 |
|
| 4296 |
6bk8:6 (3.3Å) |
102 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00006184A9 | RF00026 | Saccharomyces cerevisiae 4932 |
29146870 | 383 |
Assembly1 rna:2:3~1169 53,55~56,58~62,88~89,92~102 rna:5:28~173 72~73,75~76 rna:e:-13~21 59,77~78 rna:i:1~1118 45~51,58~59,79 protein:A:126~2106 35~36,44,47,49~50,57,61~63,69~ 73,75~76,78 protein:F:3~266 28~29,31~32 protein:G:3~257 34~42 protein:H:2~175 62~63,65~66,74,84~85 protein:I:2~157 1,25~26,28~30,35 protein:M:50~455 21,23 protein:R:92~215 89~93 protein:S:2~253 52~55,66~67,83~85 protein:T:12~556 65~67,85~87,90~91 MG:6:501 78,80 MG:6:504 61,77 |
| 4297 |
6boh:A (3.4Å) |
1507 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A763A8 | RF00177 | Thermus thermophilus HB27 262724 |
29731232 | Assembly1 rna:B:6~2897 702,783~784,899,1407~1409,1418 ,1429~1430,1443,1473~1475,1483 ~1485,1493~1497,1517 rna:HA:13~23 530,926,1196,1400~1403,1492~14 93,1498 rna:IA:1~76 790,966,1229,1338~1341,1400 protein:E:2~276 773~774 protein:L:1~122 339,1422~1423 protein:Q:1~137 345~346,1431~1432,1443,1446~14 47,1464~1465 protein:JA:102~211 519,955,1397,1493 protein:LA:7~240 828~830,1073~1075,1100~1104 protein:MA:2~207 421,1055~1062,1106~1109,1111~1 113,1189~1191,1206,1255~1257 protein:NA:2~209 8,401~413,425~430,436~438,489~ 490,498,508~509,511~512,541~54 6,619~620 protein:OA:5~155 6~9,15~16,18~19,559~560,864,92 1~923,1070~1071,1073,1077~1081 ,1192~1193,1398 protein:PA:1~101 671,673~674,710,737~739 protein:QA:2~156 932~933,935,938~940,1092,1239~ 1241,1290~1291,1297~1298,1346, 1350~1351,1372~1381 protein:RA:1~138 4,587,589~590,597~600,640~643, 653~654,755~756,824~826,828,86 1,875~878 protein:SA:2~128 942~943,966~967,969~970,1117~1 118,1129~1130,1147~1148,1179~1 180,1186,1231~1233,1249~1251,1 291~1292,1342~1344,1346~1351,1 367~1373 protein:TA:3~100 963~964,972~973,975,1059~1061, 1123~1124,1126,1150~1153,1189, 1198~1199,1202,1253~1255,1278~ 1280,1366~1368 protein:UA:11~126 675~676,683~686,688~692,694~69 5,704,706~708,716,718,778~780, 796~797,1523~1525 protein:VA:5~126 34~37,303,362~363,501~504,519~ 523,525~529,537~539,552~554,56 2~564,567~568,585,880~882,911, 913,1492 protein:WA:2~118 947~951,954,1225~1229,1295,130 2,1307~1310,1320~1321,1328~133 0 protein:XA:2~61 973~976,979~983,994~995,1015,1 047~1049,1059~1060,1114~1115,1 186~1188,1202~1203,1216~1219,1 317,1357~1360,1369 protein:YA:2~89 579~582,656~660,666~669,728~73 0,739~742,750~755,763~764,808 protein:ZA:1~83 43~44,110,112,134~137,228~230, 310~311,375~377,390~393,449~45 0,452~453,468,474,608,617,624~ 627 protein:AB:2~100 127~128,130,189~190,234~238,24 7,253~256,264~267,273,275~280, 564,583~584,760 protein:BB:19~88 663~664,673~674,718~721,734~73 6,834~836 protein:CB:2~84 955,958~959,986,1014,1220~1227 ,1312~1314,1316~1321 protein:DB:8~106 61,102~103,105,107~108,132,175 ,177,185,186A,186B,186C,191F,1 91G,192~196,224,259~262,322~32 5,332~333,1438~1439,1453~1455, 1459~1460 protein:EB:2~25 1235~1236,1243~1244,1267,1270, 1285~1286,1288~1289,1304~1305, 1325~1331,1352~1353 MG:A:1609 13,916 MG:A:1622 858,869 MG:A:1625 1414~1415 MG:A:1638 1294~1295 MG:A:1651 191C,191D MG:A:1656 1300,1334 MG:A:1673 48~49 MG:A:1677 1022~1023 MG:A:1681 125,292 MG:A:1684 575~576,881~882 MG:A:1687 1027,1028A MG:A:1693 160,346 MG:A:1698 191B,191C MG:A:1701 495~496 MG:A:1706 162,347~348 MG:A:1719 493~494 MG:A:1720 237~238 MG:A:1728 1239,1241 MG:A:1736 191A,191B MG:A:1738 297,301 MG:A:1745 186D,186E MG:A:1774 191D,191E MG:A:1777 517,531 MG:A:1779 1442~1443,1446 |
|
| 4298 |
6boh:B (3.4Å) |
2880 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS0000A76375 | RF02541 | Thermus thermophilus HB27 262724 |
29731232 | Assembly1 rna:A:4~1533 1689,1701~1704,1832,1836~1837, 1846,1848,1912~1913,1915~1916, 1919~1920,1947~1948,1958~1961, 2863~2864 rna:C:1~119 861~864,915,917~919,958 rna:D:1~76 1851,1885,2112,2169,2180~2181, 2394~2395,2421~2422 rna:IA:1~76 1907~1909,1923~1924,2252~2253, 2255,2450~2451,2585,2602 protein:E:2~276 690~694,705,727~729,764,773,77 8~782,784,1355,1426,1490~1491, 1500~1501,1565~1569,1693,1695, 1788~1792,1795~1801,1803~1807, 1811~1820,1823~1830,1842~1845, 1901~1903,1971,2073,2086,2207~ 2208,2218~2219,2224,2227~2228, 2239,2588,2590~2591,2598~2599 protein:F:1~204 574,745,1130,1654~1658,1670,16 75,1993~1994,1997~1999,2024~20 25,2032,2048~2053,2511~2514,25 71~2572,2574~2575,2578~2580,26 12,2618~2622,2633~2638,2679~26 83,2723~2724,2728~2733,2771~27 73,2784~2787,2811,2820~2823,28 30~2831 protein:G:6~207 38~39,320~323,441~444,449,451~ 452,468~470,586,588,598~601,60 6~608,615~617,618A,619~620,659 ~660,671~675,797~798,801,1202, 1205,1244,1246,1248,1254~1258, 2059~2061,2443~2445 protein:H:2~182 2302~2308,2310~2316 protein:I:2~175 1035~1036,1113,2529~2531,2653, 2657~2660,2666~2668,2744~2751, 2757~2758,2760 protein:J:1~146 270M,270N,270P,270Q,270R,2093~ 2094,2198~2199 protein:K:1~140 6~8,528,537,557~558,995,1005~1 007,1009,1012,1021~1022,1131,1 138~1141,1142B,1143,2639~2642, 2780 protein:L:1~122 1664~1667,1952,1995~1996,2547, 2561~2563,2565~2566,2674~2675, 2684~2685,2726~2728 protein:M:1~150 195~196,244~245,249~252,389,41 1,566~568,587,598~599,621~622, 625~627,631,635~637,661~663,66 6,671,805~807,810~814,825~826, 831~833,942,1190~1193,1242~124 5,1249~1250,2358,2392~2394,240 4,2406,2414~2416,2428~2429 protein:N:1~141 863~864,868,870~872,905~908,91 0~912,953~958,960,1029~1030,22 50~2251,2275~2278,2467~2469,24 83~2485,2493~2496 protein:O:1~118 1275~1279,1287~1288,1294~1295, 1454~1455,1649~1654,2001~2002, 2690,2706~2708,2710,2713,2722~ 2723,2817~2818,2820~2822,2838~ 2841,2850,2852,2869~2870,2873, 2880~2882 protein:P:3~112 2292,2294~2296,2318~2319,2334~ 2335,2376~2379 protein:Q:1~137 1753~1755,2682~2685,2719,2845~ 2849,2864,2867,2875~2876 protein:R:2~118 17~20,29~30,444~446,516,532~53 6,559~561,563,580~581,583~584, 977,992~998,1009~1012,1151~115 6,1198~1199,1215~1216,1218,122 0,1226~1227,1248~1249,1251~125 2,2018~2021 protein:S:1~101 564~566,573,814~815,975,992~99 4,996,1161~1163,1187~1188,1221 ,1223~1226 protein:T:1~112 24~26,486~489,493~496,508,517~ 519,747~748,751,1261~1262,1266 ,1322~1323,1614~1615,2009~2014 protein:U:1~95 58,64~65,71~72,137B,138~139,14 1B,142~143,456,1311~1312,1334~ 1342,1398~1399,1598~1601 protein:V:1~107 81,83~86,106,295~300,302,308~3 10,328~329,335~337,480~481,483 ~484,498,501 protein:W:1~189 874~876,896,904 protein:X:2~85 855~858,921~923,2251,2253,2256 ,2261~2264,2271,2277~2280,2330 ~2331,2334,2352~2357,2363~2366 ,2384~2387,2451 protein:Y:2~98 152,154A,189~190,200~201,205,2 70I,270J,270S,270T,372,379~381 ,387~388,396~398,1364~1365,207 9~2080,2090~2091,2205~2206,221 3,2230~2232,2395~2397,2432 protein:Z:1~70 61,72,75~77,87,94~98,101~102,1 11~112 protein:AA:1~60 849~852,931~933,968~970,988~98 9,1157~1158,1183~1184 protein:CA:2~60 15~17,516~517,747,1262~1264,12 66,2015~2022,2045~2046,2054~20 57,2505,2577,2611~2615,2814~28 16,2883~2885 protein:DA:2~54 643,2283~2286,2344~2348,2371~2 372,2399,2401,2419,2421 protein:EA:1~48 53,117,124~126,180,458~459,464 ~469,683~688,752,770~771,788,1 309~1311,1367,1378,1612~1613,1 619~1620,1781 protein:FA:2~65 242~243,245,247,249~251,253~25 4,591~593,629~630,650~651,667, 833~835,938,2349~2351,2359~236 2,2382,2390,2392~2394,2418~242 2 protein:GA:1~37 1031~1034,1124~1125,2466~2468, 2478,2526~2527,2539,2742,2753, 2755~2757 protein:JA:102~211 1914~1915 protein:YA:2~89 714~716 BLS:B:9001 2064,2251~2252,2439,2600~2602 MG:B:9014 1784,1981 MG:B:9018 26~27 MG:B:9024 2837~2838 MG:B:9036 1822~1823 MG:B:9037 2218,2224 MG:B:9039 2245,2436~2437 MG:B:9051 1391~1392 MG:B:9054 2352~2353 MG:B:9077 827,2068 MG:B:9079 1812~1814 MG:B:9085 196~197 MG:B:9087 1271,1273 MG:B:9096 1263~1264,2014 MG:B:9100 99,102 MG:B:9103 1662,2716 MG:B:9129 539,553~554 MG:B:9133 213~214 MG:B:9138 161~162 MG:B:9140 713~714 MG:B:9147 299,338 MG:B:9152 1699,1762~1763 MG:B:9159 270O,270P MG:B:9163 702~703 MG:B:9166 205,382 MG:B:9170 2448~2449 MG:B:9175 488,491 MG:B:9180 273G,274 MG:B:9182 1317,1536 MG:B:9183 2304~2305 MG:B:9201 270P,270Q MG:B:9203 1528,1542 MG:B:9221 270M,270N MG:B:9230 1461~1462 MG:B:9235 275~276 MG:B:9243 270I,270J MG:B:9246 1375~1376 MG:B:9258 931,933 MG:B:9261 792~793,2441 MG:B:9266 1346~1347 MG:B:9300 59,74 MG:B:9309 270M,270O MG:B:9310 2896~2897 MG:B:9311 2660~2661 MG:B:9312 543~544 MG:B:9316 2366~2367 MG:B:9337 506~507 MG:B:9346 91~92 MG:B:9348 270J,270K MG:B:9363 528~529 MG:B:9374 137B,138 MG:B:9378 1062,1072 MG:B:9382 544~545 MG:B:9401 2653~2654 MG:B:9404 270L,270N MG:B:9408 1836,1930 MG:B:9409 1427~1428 MG:B:9422 270I,270J |
|
| 4299 |
6boh:C (3.4Å) |
120 | GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome |
URS000080DFF2 | RF00001 | Thermus thermophilus HB27 262724 |
29731232 | Assembly1 rna:B:6~2897 78~81,89B,96~97,99~101 protein:H:2~182 31,34,41~45,55~57 protein:N:1~141 90~91 protein:P:3~112 7~9,27~29,37~38,47~52,113~114, 116 protein:W:1~189 73~77,91~92,102~105 protein:X:2~85 10~12 protein:AA:1~60 83~84 protein:BA:1~69 39~40,42~44 MG:C:216 4~5,62 |
|
| 4300 |
6boh:D (3.4Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli K-12 83333 |
29731232 | Assembly1 rna:A:4~1533 35,38 rna:B:6~2897 17A,19,56,71,76 protein:Y:2~98 73~75 protein:QA:2~156 31~32,40~41 MG:D:104 74~75 |
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12405 RNAs.
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Reference: