FURNA

Download all results in tab-seperated text for 12405 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

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Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	Ligand & binding nucleotides
12401	9zrg:A6 (3.1Å)	2169	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02543 RF02540 RF02541	Heterocephalus glaber 10181	41603730 41603730	Assembly1 protein:AI:2~207 2893~2894,3610,5016~5017,5019, 5023~5024,5026~5027 protein:CR:1~189 2384~2387,2411~2413,2415,2425~ 2427,2524~2527,2615~2617,2633~ 2635,2663~2666,2668~2669,2709~ 2711,2808,2811~2813,2819~2821, 2823~2824,2863~2864,2887~2891, 2896~2897,3596~3597,3604~3608, 3619,3622,4645~4647 protein:CW:1~124 3614~3616,4628,4662~4663,5004~ 5006,5037~5038,5040~5041 protein:Cz:13~217 3966~3975,4029~4030,4032,4040~ 4042,4045~4048,4051~4052,4054~ 4056 protein:CO:2~203 3869,3886~3888,4564~4565,4583~ 4587,4681,4683,4702,4710~4713, 4750,4756~4760,4762,4767~4768, 4861,4873,4875,4892~4893,4910~ 4911 protein:CL:2~211 4357~4358 protein:CV:8~140 2845~2848,2850,3798~3799,3842~ 3843,4457,4493~4494,4507~4510, 4593,4595,4617~4621,4629,4670~ 4673 protein:CM:1~139 4763~4764,4858~4859,4869~4872, 4877,4879~4882,4893,4896,4927~ 4929 protein:Ca:2~148 2282~2285,2287~2288,2340~2342, 2344~2345,4304,4340~4341,4352, 4354,4364~4365,4376~4377 protein:CN:2~204 2457~2461,3669~3671,3928~3929, 3937~3938,4077~4078,4174~4175, 4177,4185~4187 protein:CI:2~214 4195,4212,4221~4225,4405~4406, 4413~4415,4429~4433,4441~4442 protein:CD:9~297 4239~4240,4264~4265,4279~4282, 4323~4326 protein:CQ:1~188 2268~2269,2277~2278,4306~4307, 4339~4341,4366~4367 protein:CA:2~256 2448,2503,2594~2595,2739~2743, 3650~3654,3656~3662,3666~3668, 3676~3691,3705~3708,3745~3750, 3919~3920,3928~3930,4081~4084, 4086~4088,4117~4118,4120~4121, 4123~4125,4166~4167,4181~4182, 4184~4185,4536,4538~4539,4543~ 4546 protein:CS:2~176 4762~4764,4871,4875~4876 protein:CT:2~160 4203~4204,4206~4210,4215~4219, 4275~4279,4282,4299~4301,4304~ 4305,4310,4312~4315,4327,4332~ 4335 protein:CP:2~153 2357,2360~2362,2418~2422,2794~ 2795,3855~3861,3891~3893,4568~ 4569,4969~4971,4980~4982 protein:CU:15~126 2619~2622,2624,2626,2630~2632, 2702~2703,2706,2708 protein:CX:36~156 2434~2438,2472,2474~2475,2526, 2532~2533,2778~2781,4084~4086 protein:CZ:2~136 2555~2556,2572~2581,2655~2656, 2753~2755,2759,2926~2928,3268, 4122~4124,4128~4129,4148~4150 protein:Cr:1~137 2263~2264,2266~2269,2289~2290, 2298~2299,2336~2338 protein:Cb:2~68 4194~4195,4218~4220,4314~4315 protein:CB:2~393 2835~2838,2856~2857,3840,3842, 3844~3845,3870~3871,3878,3895~ 3899,4455~4460,4491~4493,4515~ 4518,4520~4521,4523~4526,4557~ 4558,4564~4568,4578~4582,4587, 4615~4617,4621~4627,4664~4665, 4667~4668,4674~4675,4677,4714~ 4718,4723~4727,4908~4911,4965~ 4969,4974,4976~4979,4981~4982, 4984~4988,5000~5003,5041~5042, 5047,5049~5052,5061 protein:CF:20~248 2258~2260,2274~2275 protein:Cc:10~109 2657~2658,2660,2673~2675,4119~ 4120 protein:Cd:12~124 2369~2374,2389~2390,2832~2833, 4634~4638,4652~4655,4657~4658, 4988,4995~4998,5045~5046,5048, 5055~5062 protein:Ce:1~133 2279,2281,2300~2303,2305~2308, 2316~2322,2324~2327,2347,3865 protein:Cf:2~110 4747,4749,4751~4753,4943,4945~ 4949 protein:Cg:2~115 2395,2397,2399~2403,2441,2513~ 2519,2521~2522,2530,2539~2540, 2582~2584,2587,2596~2599,2601, 2612~2614,2638~2641,2652~2654, 2682~2685,2687,2695,2697~2698, 2730~2731,2748~2752,2768~2769, 2802~2805,2807,4096,4119~4122 protein:Ci:1~103 3722~3725,3727~3728,4066 protein:Cj:2~91 2403~2405,2792~2793,2799~2800, 3642~3643 protein:Ck:2~70 2536~2538,2691~2696,2772~2774 protein:Cl:2~51 2404~2409,2428~2432,2512,2780~ 2782,2790,2792,2796 protein:CC:4~361 2273~2274,2294~2301,2333~2335, 2338~2341,2343,2349~2354,3905~ 3906,4390~4391 protein:Cm:77~128 4423~4425,4472~4475,4485,4685~ 4687,4695~4699 protein:Cn:1~25 2873,3782,3807,3822 protein:Cp:3~92 2671~2674,2737~2739,2741,2874~ 2876,3635,3692~3694,3824~3825, 4121 protein:Co:2~106 3729~3730,3925~3927,4229~4234, 4285~4286,4290~4294,4317~4319, 4337~4338,4342~4347,4362~4363, 4368~4374,4379 protein:CJ:9~176 4248~4251,4253~4254,4256~4262, 4280 protein:CH:1~191 4471,4474~4479,4602~4604,4610~ 4613,4686~4695,4700~4702,4704, 4763~4764 protein:CE:27~288 4753,4883~4884,4930~4932,4935~ 4944,4947~4948 protein:CG:21~266 2471~2472,3940~3941,4075~4076, 4085~4088,4117,4124~4129,4146~ 4147,4157,4161~4164 rna:B2:1~1869 2884~2885,3694~3695,3700,3709, 3711~3712,3759~3760,3762~3763, 3766~3767,3769,3794~3796,3806~ 3808 rna:A5:1~2091 2258~2266,2268,2270~2288,2290, 2294~2295,2304~2305,2309~2311, 2313~2314,2319~2321,2329~2331, 2340~2341,2343,2345~2357,2379, 2396,2448~2451,2460~2462,2511, 2513~2514,2604~2606,2668~2669, 2743,2794~2795,2797~2799,2802, 2812~2814,2839~2840,2856~2857, 3636~3643,3646,3649~3651,3726~ 3728,3828,3861,3864~3868,3871~ 3885,3887~3889,3901,3906,3912, 3914~3919,3924,3935~3936,4153~ 4154,4175~4178,4186,4188,4191~ 4193,4195,4209~4210,4212~4215, 4217~4220,4223,4296~4297,4303~ 4305,4340~4341,4349,4351,4355~ 4362,4364~4365,4376~4380,4386, 4388~4391,4394,4402~4403,4405, 4409,4411~4412,4432~4435,4437, 4440~4442,4444~4448,4461~4462, 4464,4514~4518,4527,4534~4535, 4554~4558,4560,4683,4693~4694, 4940~4946 rna:A8:1~157 2308~2309,2312~2313,2333~2334, 2355,2444~2445,2487,2493,2509, 2542,2544,2778~2779,3890,4162, 4573 rna:BC:1~75 3714~3715,3739~3740,3958,3967, 4046,4180,4341~4342,4370~4371
12402	9zrg:A7 (3.1Å)	121	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000F9D45	RF00001	Heterocephalus glaber 10181	41603730 41603730	Assembly1 protein:CI:2~214 63~65,90~92,104~105 protein:CD:9~297 1,5~8,10~11,13~15,22,26~27,31, 33~35,44~49,59~60,62~63,66~67, 107~110,113~120 protein:CS:2~176 74~76,86~87,93~99 protein:CT:2~160 8~11,67 protein:CF:20~248 82~84,95~97 protein:CJ:9~176 5,17~19,27~29,39~40,42~44,54~5 6 rna:A5:1~2091 77~80,84,88,98~103
12403	9zrg:A8 (3.1Å)	157	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF00002 RF02540	Heterocephalus glaber 10181	41603730 41603730	Assembly1 protein:CL:2~211 28~31 protein:CN:2~204 139~142 protein:CP:2~153 3~5,12~15 protein:CX:36~156 59~60,117,130~136,146,148,156 protein:CY:2~134 22~24,70~75,83,87,90~91 protein:Ch:1~123 35~39,49,60~66,78~79,81~82,86, 95~96 protein:Cj:2~91 32,34~35,40~43,56~58,66,70,86, 92~95,99,101~103,109,111 protein:Cl:2~51 45~46,50~53,75,110~111 protein:CC:4~361 21~22,26~28 protein:CG:21~266 148~155 rna:A5:1~2091 4~22,24~37,40~41,53~54,103,115 ,136,138~149,151~156 rna:A6:2258~5070 1,3~4,9~10,15,18~21,108,110,11 2~113,124~127,150
12404	9zrg:B2 (3.1Å)	1799	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Heterocephalus glaber 10181	41603730 41603730	Assembly1 protein:AO:16~151 942~944,951~953,955~964,973~97 6,983~984,986,1046~1047,1063~1 066,1838~1839,1854~1858 protein:AX:1~142 18,28~30,358~359,399,407,482~4 83,596~597,614~621,624~625,647 ~650,658~661,663,681~682,1153, 1157,1159~1165,1188~1190,1192~ 1194,1824 protein:AN:2~151 675~677,916,918~919,921,923~92 6,934~937,996,1007~1010,1012~1 013,1015~1024,1031,1075~1076,1 091~1092 protein:AL:1~158 111,113~114,222,291~294,351~35 5,372~376,383~384,386,394~397, 399,421~422,659~660,803,855,86 7~868,871~873,904 protein:AB:19~233 931~932,940~943,952~953,977,98 7~990,1003~1005,1101~1104,1113 ~1114,1121~1124,1869 protein:AA:2~209 1097,1126,1137,1350~1351,1353, 1377~1380 protein:AV:1~82 1137~1139 protein:AY:3~128 53~54,56,83~84,151,161,491~493 ,502,507,570~574,580~583,823,8 32,835,837,840~841 protein:Aa:2~108 985,987,989~993,998~1001,1087, 1132~1134,1147~1148,1199~1200, 1210,1691~1693,1835,1858,1860~ 1869 protein:Ab:1~84 921,927~929,1014~1016,1105~110 6,1118~1121,1127~1129 protein:Ae:1~59 524~525,534,551~552,590,593,60 5~608,612,615~617,633,635~637, 639,642,1711 protein:AJ:7~181 3~4,21~24,38~39,519~523,526~52 7,560~562,581,583,586,603~604, 640~644,654,816~821,823~824,82 6~827,847 protein:AE:1~263 91~95,110,119~124,216,289,291, 296~298,343~347,429~432,445~44 7,449~450,494~497,502~503,508~ 509,795,807~809,811~814,828~82 9,844~847,857 protein:AC:53~278 1~6,10~11,13~15,1142~1143,1154 ~1156,1203~1205,1347,1351,1355 ~1358,1486,1688,1699 protein:AG:1~237 63~72,74~79,91,124~126,142~146 ,151,153~157,161~171,229~230,3 12,314~315,317~318,331~334,442 ~443,449,452~454,466~468,786~7 88,1737~1738,1745~1746,1790~17 91 protein:AH:5~194 687~688,690,744~745,797~799,80 1,861,868~869,873,913~915,917 protein:AW:2~130 419~420,682~687,736,803~806,86 0,862~863,918~919,921~922,1092 ~1096,1139,1152~1153,1155~1159 protein:AI:2~207 102,104~105,117,189~192,208,21 9~222,301~303,305~306,309,349~ 350,366~367,370~371,376~381,38 4~387,389,395~396,402~403,432~ 434,439~441,444~449,1740~1741, 1798 protein:CR:1~189 393,871~873,909~911 protein:CW:1~124 167,320,326~328,1749~1750,1781 ~1783,1793 protein:Ag:2~314 1398,1450~1451,1458,1472 protein:AU:16~119 1250~1251,1254,1256,1337~1338, 1391~1392,1400~1402,1404,1445~ 1448,1491~1492,1495,1547~1548, 1580,1667~1669 protein:AK:1~98 1274,1276~1277,1312~1315,1497, 1555 protein:AM:9~132 1283~1286,1310~1313 protein:AS:6~142 1230~1232,1519~1524,1567,1596~ 1598,1603~1604,1608~1613,1622~ 1623,1628~1632 protein:Ad:4~56 1255~1256,1261~1264,1274,1290, 1301,1326,1336~1337,1391,1481~ 1482,1495,1512~1514,1550,1554, 1556~1557,1617~1619,1657~1661 protein:AR:1~126 1101,1123~1125,1368~1370,1372~ 1373,1375~1376,1389,1450~1456, 1464~1467,1476 protein:AP:12~130 1236,1238~1241,1267~1268,1297~ 1300,1514~1516,1520~1523,1612~ 1622 protein:AT:4~144 1415~1419,1430~1431,1529,1537~ 1543,1562~1570,1585~1590,1593, 1595~1596,1605~1607,1627,1653~ 1655,1664~1665 protein:AZ:41~115 1535,1593~1595,1597~1600 protein:Ac:5~68 1219,1679~1681,1683 protein:AD:5~227 607,628,1332~1336,1383~1387,13 89~1390,1482~1486,1489,1498~15 01,1550~1551,1553,1578~1579 protein:Af:82~152 1266~1267,1271,1286~1292,1302~ 1311,1327,1507~1509 protein:AF:14~204 961~962,1220~1224,1469~1470,15 33~1535,1591~1592,1598~1600,16 36~1637,1647,1650~1652,1673~16 79 protein:AQ:6~146 1216,1225,1248~1249,1252,1393, 1397,1407~1409,1429~1431,1442~ 1444,1479~1480,1526~1528,1542~ 1545,1592~1593,1643~1645,1647~ 1651,1667~1674 protein:CV:8~140 1723~1725 protein:CA:2~256 1043~1044,1069~1070 protein:Cn:1~25 1169,1171~1175,1182~1184,1705~ 1706,1717~1718,1818,1841~1847, 1852~1853 protein:Cp:3~92 939,1180 rna:A5:1~2091 677~678,1029~1030 rna:A6:2258~5070 948~949,970,1052,1059,1180~118 1,1708~1710,1719~1720,1731,181 5~1816,1825~1828,1849
12405	9zrg:BC (3.1Å)	75	GO:0030533 (F) triplet codon-amino aci...	N/A	RF00005	Heterocephalus glaber 10181	41603730 41603730	Assembly1 rna:B2:1~1869 34,37 rna:A6:2258~5070 3~4,18~19,55~56,69~70,72,74~75 protein:AF:14~204 30~33,39~40 protein:Cz:13~217 52~55,61 protein:Co:2~106 74~75

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.