SEQ2FUN

FURNA
Download all results in tab-seperated text for 3576 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1a60:A

    		 44 GO:0006417 (P) regulation of translation URS000080E316 RF00233 Turnip
    yellow
    mosaic
    virus
    12154    		 9545221
    2 1asy:R
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 2047877 Assembly1
    protein:A:68~557 601,610,612,625,627~628,630,63
    2~638,668,672~676
    3 1asy:S
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 2047877 Assembly1
    protein:B:68~557 601,612,625~626,632,634~638,66
    8,672~676
    4 1asz:R
    (3.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 8313877 Assembly1
    protein:A:68~557 601,610,612,626,628,632~638,66
    7~668,672~676
    5 1asz:S
    (3.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 8313877 Assembly1
    protein:B:68~557 601,610~612,626~627,632~638,66
    8,672~676
    6 1b23:R
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000003E908 RF00005 Escherichia
    coli
    562    		 10368282 Assembly1
    protein:P:1~405 1~3,51~54,63~67,74~76
    7 1c0a:B
    (2.4Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009EE82 RF00005 Escherichia
    coli
    562    		 10562565 Assembly1
    protein:A:1~585 610~612,625,628,632~636,638,66
    7~676
    8 1cq5:A

    		 43 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E0C0 RF00169 Escherichia
    coli
    562    		 10580470
    9 1cql:A

    		 43 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E0C0 RF00169 Escherichia
    coli
    562    		 10580470
    10 1duh:A
    (2.7Å)
    		 45 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E0AE RF00169 synthetic
    construct
    32630    		 10801497 Assembly1
    rna:A-2:31~75 31~38,43~75
    MG:A:2 59~60
    SO4:A:4 48~49
    11 1dul:B
    (1.8Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DD2B RF00169 synthetic
    construct
    32630    		 10678824 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    K:B:701 146~147,163~165
    K:B:702 135~137
    K:B:703 149~150,161~163
    12 1e8o:E
    (3.2Å)
    		 50 GO:0006617 (P) SRP-dependent cotransla...
    GO:0035195 (P) miRNA-mediated post-tra...
    GO:0005786 (C) signal recognition part...
    GO:0016442 (C) RISC complex    		 URS000080E0CE RF00017
    RF04277    		 Homo
    sapiens
    9606    		 11089964
    M054_0.6

    M109_0.6

    M044_0.6

    445

    M151_0.6    		 Assembly1
    protein:A:2~75 112~114
    protein:B:2~95 113,135~136
    protein:C:5~75 121~124
    protein:D:2~95 119,121,123~129
    13 1e8s:C
    (4.0Å)
    		 86 GO:0006617 (P) SRP-dependent cotransla...
    GO:0035195 (P) miRNA-mediated post-tra...
    GO:0005786 (C) signal recognition part...
    GO:0016442 (C) RISC complex    		 URS000080DFFF RF00017
    RF04277    		 Homo
    sapiens
    9606    		 11089964
    M054_0.6

    M109_0.6

    445

    M151_0.6

    M044_0.6

    509
    14 1efw:C
    (3.0Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000150212 RF00005 Escherichia
    coli
    562    		 10843857 Assembly1
    protein:A:1~580 11,26~29,32~38,68,72
    15 1efw:D
    (3.0Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000150212 RF00005 Escherichia
    coli
    562    		 10843857 Assembly2
    protein:B:1~580 28,32~38
    16 1eg0:O
    (11.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DD9A RF00005 Escherichia
    coli
    562    		 10721991
    17 1ehz:A
    (1.93Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 10943889 Assembly1
    MG:A:590 37~38
    MG:A:540 20~21
    MG:A:580 7,14
    MN:A:530 16,19
    18 1eiy:C
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E078 RF00005 Thermus
    thermophilus
    HB8
    300852    		 9016717 Assembly1
    protein:A:6~350 75~76
    protein:B:1~785 26~27,74~75
    protein:A-2:6~350 19,43~44,56
    protein:B-2:1~785 11~12,25~26,34~37
    19 1esy:A

    		 19 GO:0043484 (P) regulation of RNA splicing URS000080E02B RF01380 Human
    immunodeficiency
    virus
    1
    11676    		 10860728
    20 1euq:B
    (3.1Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E003 RF00005 Escherichia
    coli
    562    		 10860750 Assembly1
    protein:A:8 902~904,906,911~913,916,925,92
    7,934~938,972~976
    21 1euy:B
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E0EE RF00005 Escherichia
    coli
    562    		 10860750 Assembly1
    protein:A:8 902~907,911~914,916,925,927,93
    4~938,971~976
    22 1evv:A
    (2.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    4930    		 10926517 Assembly1
    MG:A:902 20~21
    MG:A:908 71~72
    SPM:A:501 53~55,58
    23 1exd:B
    (2.7Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE52 RF00005 Escherichia
    coli
    562    		 10881199 Assembly1
    protein:A:8~547 902~908,911~913,925,934~938,96
    9,971~976
    SO4:B:1393 925~926,944
    24 1f6u:B

    		 19 GO:0043484 (P) regulation of RNA splicing URS000080E02B RF01380 Human
    immunodeficiency
    virus
    1
    11676    		 10926523 Assembly1
    protein:A:1 209~213,215
    25 1f7u:B
    (2.2Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1EA RF00005 Saccharomyces
    cerevisiae
    4932    		 11060012 Assembly1
    protein:A:2~607 903~904,913~916,918~919,923~92
    4,934~941,956,969~974,976
    26 1f7v:B
    (2.9Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1EA RF00005 Saccharomyces
    cerevisiae
    4932    		 11060012 Assembly1
    protein:A:2~607 904,914~916,918~919,922~925,93
    4~941,956,969~972
    27 1fcw:A
    (17.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 10931859 Assembly1
    rna:B:1~76 1~74
    28 1fcw:B
    (17.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 10931859 Assembly1
    rna:A:1~76 1~74
    rna:C:1~76 1,16,71~74
    29 1fcw:C
    (17.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 10931859 Assembly1
    rna:B:1~76 47,74~76
    30 1fcw:D
    (17.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 10931859 Assembly1
    rna:E:1~76 5~26,44~65,67~68
    31 1fcw:E
    (17.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 10931859 Assembly1
    rna:D:1~76 1~8,13~21,47~70
    32 1ffy:T
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E234 RF00005 Escherichia
    coli
    562    		 10446055 Assembly1
    protein:A:1~917 3~5,11~13,23~25,31~35,37~42,68
    ~72,74
    K:T:301 32~33,36,38~39
    MG:T:1206 8~9
    MG:T:1207 16,19,59~60
    MG:T:1209 48,50
    33 1fir:A
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000032F6AC RF00005 Bos
    taurus
    9913    		 11073212
    34 1g59:B
    (2.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 11224561 Assembly1
    protein:A:1~468 503,505~506,511~514,524~525,53
    4~539,569~571,573~576
    35 1g59:D
    (2.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 11224561 Assembly2
    protein:C:1~468 503~506,511~515,524~525,534~53
    9,569~570,573~576
    36 1gax:C
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004A2E91 RF00005 Thermus
    thermophilus
    274    		 11114335 Assembly1
    protein:A:1 905,911~914,918~920,923~924,93
    4~935,937~939,941,943,955,973~
    975
    37 1gax:D
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004A2E91 RF00005 Thermus
    thermophilus
    274    		 11114335 Assembly2
    protein:B:1 905,911~915,918~919,923~924,93
    0,932,934~935,937~940,955,973~
    975
    38 1gid:A
    (2.5Å)
    		 158 GO:0000372 (P) Group I intron splicing URS000080E052 RF00028 synthetic
    construct
    32630    		 8781224 Assembly1
    MG:A:267 183~184,186
    MG:A:268 184,186~187
    MG:A:272 163~164
    NCO:A:261 147~148,155
    NCO:A:262 174~177
    39 1gid:B
    (2.5Å)
    		 158 GO:0000372 (P) Group I intron splicing URS000080E052 RF00028 synthetic
    construct
    32630    		 8781224 Assembly2
    MG:B:269 183~184
    MG:B:270 184,186~187
    MG:B:271 163~164
    MG:B:281 249~250
    NCO:B:263 147~149,155
    NCO:B:264 174~177
    40 1grz:A
    (5.0Å)
    		 247 GO:0000372 (P) Group I intron splicing URS000080E07B RF00028 Tetrahymena
    thermophila
    5911    		 9841391
    41 1grz:B
    (5.0Å)
    		 247 GO:0000372 (P) Group I intron splicing URS000080E07B RF00028 Tetrahymena
    thermophila
    5911    		 9841391
    42 1gsg:T
    (2.8Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 2479982
    43 1gtr:B
    (2.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000541BD0 RF00005 Escherichia
    coli
    562    		 1857417 Assembly1
    protein:A:8 2~8,11~14,25,27,34~38,69,71~76
    44 1gts:B
    (2.8Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000541BD0 RF00005 Escherichia
    coli
    562    		 8364025 Assembly1
    protein:A:8 2~7,11~14,16,25,27,34~38,72~76
    45 1h3e:B
    (2.9Å)
    		 84 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF5D RF00005 Thermus
    thermophilus
    274    		 12110594 Assembly1
    protein:A:6~432 28~30,34~36,42~43,46~47,47A,47
    B,68~69
    protein:A-2:6~432 1,67,69,71~73
    46 1h4q:T
    (3.0Å)
    		 67 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE47 RF00005 Thermus
    thermophilus
    274    		 11399074
    10970866
    10666603
    10666604
    9493271    		 Assembly1
    protein:A:5~477 27~29,44
    protein:B:5~477 34~38
    47 1h4s:T
    (2.85Å)
    		 67 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE47 RF00005 Thermus
    thermophilus
    274    		 11399074
    10970866
    10666603
    10666604
    9493271    		 Assembly1
    protein:A:5~477 10,27~29,44
    protein:B:5~477 34~38
    48 1hq1:B
    (1.52Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DD2B RF00169 synthetic
    construct
    32630    		 11243816 Assembly1
    protein:A:1~83 139~141,148~151,163~164
    K:B:4001 146~147,163~165
    K:B:4002 135~137
    K:B:4003 148~150,162
    49 1hr2:A
    (2.25Å)
    		 157 GO:0000372 (P) Group I intron splicing URS000080DD53 RF00028 synthetic
    construct
    32630    		 11286889 Assembly1
    MG:A:57 248~250
    MG:A:58 256~257
    MG:A:1 183~184,186
    MG:A:3 184,186~187
    MG:A:5 163~164
    50 1hr2:B
    (2.25Å)
    		 158 GO:0000372 (P) Group I intron splicing URS000080DD53 RF00028 synthetic
    construct
    32630    		 11286889 Assembly2
    MG:B:2 183~184,186
    MG:B:4 184,186~187
    MG:B:6 163~164
    51 1i9v:A
    (2.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 11373618 Assembly1
    NMY:A:200 23,44~45
    MG:A:301 20~21
    52 1il2:C
    (2.6Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 11566892 Assembly1
    protein:A:1~585 910~912,925~926,932~936,938,96
    7~976
    SO4:C:701 975~976
    53 1il2:D
    (2.6Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 11566892 Assembly2
    protein:B:1001 1910~1912,1925~1926,1928,1932~
    1936,1938
    54 1ivs:C
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004A2E91 RF00005 Thermus
    thermophilus
    274    		 12554880 Assembly1
    protein:A:1 905,911~914,918~919,923~924,93
    4~935,937~940,955,973~975
    55 1ivs:D
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004A2E91 RF00005 Thermus
    thermophilus
    274    		 12554880 Assembly2
    protein:B:1 905,911~915,918~919,923~924,93
    0,932,934~935,937~941,955,973~
    975
    56 1j1u:B
    (1.95Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000020A9DB RF00005 Methanocaldococcus
    jannaschii
    2190    		 12754495 Assembly1
    protein:A:1~306 535~537,569
    protein:A-2:1~306 501,568~574
    MG:B:1501 509~510,548
    57 1j2b:C
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF89 RF00005 Pyrococcus
    horikoshii
    53953    		 12732145 Assembly1
    protein:A:7~582 907~910,926~927,937~938,949,96
    7~969,975~977
    protein:B:7~582 911~920,938,940
    58 1j2b:D
    (3.3Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF89 RF00005 Pyrococcus
    horikoshii
    53953    		 12732145 Assembly1
    protein:A:7~582 911~917,933,938~940
    protein:B:7~582 908~911,924,926,938~939,949,96
    7~968,975~977
    59 1jgo:B
    (5.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    rna:1:1~27 34~36
    60 1jgo:C
    (5.6Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    rna:1:1~27 34~36
    61 1jgo:D
    (5.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E2DD RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    protein:J:2~156 33,37
    62 1jgp:B
    (7.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    rna:1:1~32 34~36
    63 1jgp:C
    (7.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    rna:1:1~32 34~36
    64 1jgp:D
    (7.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E2DD RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    protein:J:2~156 33,37
    65 1jgq:B
    (5.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    rna:1:1~36 32,34~40
    66 1jgq:C
    (5.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    rna:1:1~36 34~36
    67 1jgq:D
    (5.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E2DD RF00005 synthetic
    construct
    32630    		 11511350 Assembly1
    protein:J:2~156 33,37
    68 1ju7:A

    		 16 GO:0006398 (P) mRNA 3'-end processing ... URS000080E1CD N/A Mus
    musculus
    10090    		 11871662
    69 1jwc:A

    		 16 GO:0006398 (P) mRNA 3'-end processing ... URS000080E1CD N/A Mus
    musculus
    10090    		 11871662
    70 1kxk:A
    (3.0Å)
    		 70 GO:0000373 (P) Group II intron splicing URS000080DEDD RF00029 Saccharomyces
    cerevisiae
    4932    		 11859154 Assembly1
    MG:A:71 53~54
    71 1l8v:A
    (2.8Å)
    		 157 GO:0000372 (P) Group I intron splicing URS000080E124 RF00028 synthetic
    construct
    32630    		 12189204 Assembly1
    MG:A:307 184,186~187
    MG:A:310 183~184,186
    72 1l8v:B
    (2.8Å)
    		 157 GO:0000372 (P) Group I intron splicing URS000080E124 RF00028 synthetic
    construct
    32630    		 12189204 Assembly2
    MG:B:305 184,186~187
    MG:B:311 173~174
    MG:B:312 183~184,186
    73 1l9a:B
    (2.9Å)
    		 126 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DE1E RF00017
    RF01856    		 Homo
    sapiens
    9606    		 12086622
    1164

    M168_0.6

    M347_0.6

    1373

    1212

    s55

    110

    s71

    s72    		 Assembly1
    protein:A:1~87 140~144,146~147,149~151,195~19
    8,204~205
    MG:B:110 164~165
    MG:B:111 226~227
    MG:B:242 170,172
    MG:B:243 171~172
    MG:B:244 227~228
    MG:B:246 166~167
    MG:B:249 208~209
    74 1lng:B
    (2.3Å)
    		 97 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E11F RF00169 Methanocaldococcus
    jannaschii
    2190    		 12050674 Assembly1
    protein:A:1~87 157~160,162~167,206~209,215~21
    6
    MG:B:402 209,211
    75 1ls2:B
    (16.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 12093756
    76 1lvj:A

    		 31 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS000080DD99 RF00250 Human
    immunodeficiency
    virus
    1
    11676    		 12079782 Assembly1
    PMZ:A:47 22~26,39~40
    77 1mfq:A
    (3.1Å)
    		 128 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DE1E RF00017
    RF01856    		 Homo
    sapiens
    9606    		 12244299
    1164

    M168_0.6

    M347_0.6

    1373

    1212

    s55

    110

    s71

    s72    		 Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:C:323~438 184,192~195,207~208
    MG:A:501 192~194
    MG:A:502 183,185
    MG:A:505 116~117
    78 1mj1:C
    (13.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 12379845 Assembly1
    rna:R:1~27 11~12
    79 1mj1:D
    (13.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 12379845 Assembly1
    protein:A:1~405 50~52,65~67,76
    protein:O:1~124 12~13,69~71
    80 1ml5:B
    (14.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 12511961 Assembly1
    rna:C:11~16 34~36
    rna:a:1~2902 25,75
    protein:Z:4~365 1,72~74
    81 1n77:C
    (2.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 12554668 Assembly1
    protein:A:1~468 503~505,511~515,524~525,534~53
    9,569~571,574~576
    82 1n77:D
    (2.4Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 12554668 Assembly2
    protein:B:1~468 503~506,511~515,524~526,534~53
    9,569~571,573~576
    83 1n78:C
    (2.1Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 12554668 Assembly1
    protein:A:1~468 503~506,511~514,524~525,534~53
    9,569~571,574~576
    84 1n78:D
    (2.1Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 12554668 Assembly2
    protein:B:1~468 503~506,511~513,524~526,534~53
    8,569~570,574~576
    85 1n8x:A

    		 36 GO:0019074 (P) viral RNA genome packaging URS000080E029 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 12559920
    86 1nbs:A
    (3.15Å)
    		 120 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030680 (C) dimeric ribonuclease P ...    		 URS000080E089 RF00011 Bacillus
    subtilis
    1423    		 12610630 Assembly1
    PB:A:241 186,219~220
    PB:A:242 90,132
    PB:A:244 134,181~182
    PB:A:249 228~229
    87 1nbs:B
    (3.15Å)
    		 150 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030680 (C) dimeric ribonuclease P ...    		 URS000080E089 RF00011 Bacillus
    subtilis
    1423    		 12610630 Assembly2
    PB:B:302 90,132
    PB:B:305 134,181~182
    PB:B:306 101~102
    88 1o0b:B
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 12691748 Assembly1
    protein:A:8 902~908,910~914,916,925,934~93
    8,969,971~976
    89 1o0c:B
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 12691748 Assembly1
    protein:A:8 902~908,911~913,916,925,934~93
    8,971~976
    90 1p6v:B
    (3.2Å)
    		 45 GO:0006401 (P) RNA catabolic process URS000080E117 RF00023 Aquifex
    aeolicus
    63363    		 12904796 Assembly1
    protein:A:3~130 15~20,32,39~41
    91 1p6v:D
    (3.2Å)
    		 24 GO:0006401 (P) RNA catabolic process URS000080E117 RF00023 Aquifex
    aeolicus
    63363    		 12904796 Assembly2
    protein:C:3~130 16~20,39
    92 1qd3:A

    		 29 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS000080DFB8 RF00250 Human
    immunodeficiency
    virus
    1
    11676    		 10747964 Assembly1
    RIB:B:1 21,23
    BDG:A:46 22~24,26,41
    CYY:A:47 21,23,42~43
    93 1qf6:B
    (2.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000022C879 RF00005 Escherichia
    coli
    562    		 10319817 Assembly1
    protein:A:2 1~4,32~39,66~67,69~76
    94 1qrs:B
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 8942633 Assembly1
    protein:A:8 2~7,10~14,25,27,34~38,69,71~76
    95 1qrt:B
    (2.7Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 8942633 Assembly1
    protein:A:8 2~7,11~14,25,27,34~38,69,71~76
    96 1qru:B
    (3.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 8942633 Assembly1
    protein:A:8 2~7,11~14,25,27,34~38,72~76
    97 1qtq:B
    (2.25Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    562    		 9562563 Assembly1
    protein:A:8 902~907,911~914,916,925,934~93
    8,971~976
    98 1qu2:T
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E234 RF00005 Staphylococcus
    aureus
    1280    		 10446055 Assembly1
    protein:A:1~917 3~5,11~13,23~25,31~35,37~42,68
    ~72,74
    K:T:301 32~33,36,38~39
    MG:T:1206 8~9
    MG:T:1207 16,19,59~60
    MG:T:1209 48,50
    99 1qu3:T
    (2.9Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E234 RF00005 Staphylococcus
    aureus
    1280    		 10446055 Assembly1
    protein:A:2 1,3~5,10~13,23~25,31~43,68~74
    100 1qza:B
    (10.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF23 RF00005 Escherichia
    coli
    562    		 14566331
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.