SEQ2FUN

FURNA
Download all results in tab-seperated text for 3576 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    2001 6ndk:XV
    (3.64Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    30782843 Assembly2
    rna:XA:4~1533 29~32,34,38,40~41
    rna:XX:13~23 34~37
    rna:YA:6~2897 11~13,24~25,74~76
    protein:YG:2~182 19,56~57
    protein:Y0:8~84 2~3
    MG:XV:101 75~76
    2002 6nuo:QV
    (3.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Escherichia
    coli

    562
    33016876 Assembly1
    rna:QA:5~1531 30~31,34,38~42
    rna:QX:1~19 35~37
    rna:RA:6~2906 3,11~12,24~25,74~76
    protein:QI:2~128 32~33,35
    protein:QM:2~121 28~29
    protein:RG:2~182 56~57
    protein:R0:3~83 1~2
    2003 6nuo:XV
    (3.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Escherichia
    coli

    562
    33016876 Assembly2
    rna:XA:5~1531 30~31,34,38,41
    rna:XX:1~19 34~37
    rna:YA:6~2906 11~13,24~25,74~76
    protein:YG:2~182 20,56~57
    protein:YQ:1~141 1,64
    2004 6nwy:QV
    (3.5Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Escherichia
    coli

    562
    33016876 Assembly1
    rna:QA:5~1542 30~31,34,37,40~41
    rna:QX:1~19 35~37
    rna:RA:6~2897 3~4,19,56,70~71,76
    2005 6nwy:XV
    (3.5Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Escherichia
    coli

    562
    33016876 Assembly2
    rna:XA:5~1542 30,34,37,40~41
    rna:XX:1~19 34~37
    rna:YA:6~2897 3,19~20,56,70~71,76
    2006 6o3m:QV
    (3.97Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Escherichia
    coli

    562
    33016876 Assembly1
    rna:QA:5~1531 31~33,35,39~42
    rna:QX:4~22 36~38
    rna:RA:6~2897 3,12,25,75~77
    protein:QM:2~121 29~30
    protein:RG:2~182 57~58
    protein:R0:3~83 1~2,64
    2007 6o3m:XV
    (3.97Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Escherichia
    coli

    562
    33016876 Assembly2
    rna:XA:5~1531 31~33,35,39,41~42
    rna:XX:1~19 35~38
    rna:YA:6~2897 2~3,12~13,25~26,75~77
    protein:XM:2~120 29~30
    protein:YG:2~182 57~58
    protein:Y0:10~83 64~65
    MG:YA:3454 76~77
    2008 6o7k:v
    (4.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001BBAFC RF00005 Escherichia
    coli

    562
    31108498 Assembly1
    protein:f:382~890 71,75~77
    protein:o:3~129 34~36
    rna:g:2~1540 31~32,35,39~40,42
    rna:N:13~18 35~38
    2009 6o8w:u
    (3.53Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Enterococcus
    faecalis

    1351
    33004869 Assembly1
    rna:a:3~1550 31~32,34,40~41
    rna:v:15~19 34~37
    rna:A:4~2911 3,18~19,56~57,70~71,76
    protein:i:3~130 33,35
    2010 6o97:1w
    (2.75Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30793894 Assembly1
    rna:1A:6~2897 12,19,37~38,55~56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    protein:1Q:1~141 53~54
    MG:1w:106 1~2
    2011 6o97:1x
    (2.75Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    30793894 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    protein:1G:2~182 19,56~57
    protein:1i:2~128 33~35
    protein:1m:2~124 28~29
    K:1A:4137 75~76
    MG:1x:107 18,57~58
    2012 6o97:1y
    (2.75Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30793894 Assembly1
    rna:1A:6~2897 19,56,72,76
    protein:11:2~98 74~76
    protein:1g:2~156 40~42
    MG:1y:101 75~76
    2013 6o97:2w
    (2.75Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30793894 Assembly2
    rna:2A:6~2897 12,19,37~38,52,56,64,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    protein:2Q:1~141 52~54
    protein:2m:3~124 39~40
    2014 6o97:2x
    (2.75Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    30793894 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38,40~41
    rna:2v:12~24 34~37
    protein:2G:2~182 56~57
    protein:2i:2~128 32~35
    protein:2m:3~124 28~29
    K:2A:3434 75~76
    MG:2A:3863 75~76
    MG:2x:102 22~23
    2015 6o97:2y
    (2.75Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30793894 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    protein:2g:2~156 31~32,34,40~42
    2016 6o9j:v
    (3.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    31108498 Assembly1
    rna:B:1~2903 11~13,24,74~76
    rna:a:5~1534 29~31,34,38~39,41
    protein:F:1~178 19,55~57
    2017 6o9k:y
    (4.0Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001BBAFC RF00005 Escherichia
    coli

    562
    31108498 Assembly1
    rna:a:2~1540 31~33,35,39~40,42
    rna:x:13~18 35~38
    protein:i:3~129 34,36
    protein:z:382~890 76~77
    protein:F:1~177 52~53
    protein:6:3~52 54,63
    2018 6od9:A
    (4.102Å)

    62 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...
    URS0000868535 RF01750 Fusobacterium
    ulcerans

    861
    31282869 Assembly1
    MG:A:101 16,35
    AMZ:A:102 16~17,35,63,70~71
    K:A:104 31~32
    2019 6od9:B
    (4.102Å)

    62 GO:0006730 (P) one-carbon metabolic pr...
    GO:1900371 (P) regulation of purine nu...
    URS0000868535 RF01750 Fusobacterium
    ulcerans

    861
    31282869 Assembly2
    MG:B:101 16,35
    AMZ:B:102 16~17,35,63,70~71
    K:B:103 66~67
    2020 6of1:1w
    (2.8Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30936109 Assembly1
    rna:1A:6~2897 19,37~38,56,64,71,74~76
    rna:1a:4~1533 34~37
    rna:1v:12~24 34~37
    protein:1Q:1~141 53~55
    protein:1m:2~124 39~40
    MG:1w:103 67~68
    2021 6of1:1x
    (2.8Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    30936109 Assembly1
    rna:1A:6~2897 11~13,24~25,74~76
    rna:1a:4~1533 29~32,34,38~41
    rna:1v:12~24 34~37
    protein:1G:2~182 19,56
    protein:10:2~84 63~64
    protein:1i:2~128 33~35
    protein:1m:2~124 28~29
    MG:1A:4045 75~76
    MG:1x:106 49~50
    K:1A:4145 75~76
    2022 6of1:1y
    (2.8Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30936109 Assembly1
    rna:1A:6~2897 19,56,72,76
    protein:1g:2~156 32~33,40~42
    MG:1y:101 75~76
    2023 6of1:2w
    (2.8Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30936109 Assembly2
    rna:2A:6~2897 19,37~38,56,64,71,74~76
    rna:2a:4~1532 34~37
    rna:2v:12~24 34~37
    protein:2Q:1~141 52~55
    2024 6of1:2x
    (2.8Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    30936109 Assembly2
    rna:2A:6~2897 11~13,24~25,74~76
    rna:2a:4~1532 30~32,34,38~41
    rna:2v:12~24 34~37
    protein:2G:2~182 19,56~57
    protein:2i:2~128 32~35
    K:2A:3515 75~76
    MG:2A:3859 75~76
    2025 6of1:2y
    (2.8Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00003179F7 RF00005 Escherichia
    coli

    562
    30936109 Assembly2
    rna:2A:6~2897 19,56,71~72,76
    rna:2a:4~1532 37~38
    protein:21:2~98 74~76
    protein:2g:2~156 32,41~42
    MG:2y:103 70~71
    MG:2y:105 8,13
    2026 6of6:QV
    (3.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:5~1531 29~32,34,38~41
    rna:QX:6~24 34~37
    rna:RA:6~2897 11~13,24~25,74~76
    protein:QI:2~128 32~35
    protein:RG:2~182 56~57
    MG:QV:104 75~76
    MG:QV:106 16,60
    2027 6of6:QW
    (3.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B5E RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    protein:QG:2~156 33,40~42
    rna:RA:6~2897 17,19,56,71,76
    2028 6of6:QY
    (3.2Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001C39A4 RF00005 Escherichia
    coli
    #1/H766

    1354003
    32601241 Assembly1
    rna:QA:5~1531 34~37
    rna:QX:6~24 34~37
    rna:RA:6~2897 18~19,37~38,55~56,74~75
    protein:RQ:1~141 52~54
    protein:RZ:1~183 53~58
    2029 6of6:XV
    (3.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 30~32,34,38~41
    rna:XX:6~23 34~37
    rna:YA:6~2897 11~13,24~25,74~76
    protein:XI:2~128 32~35
    protein:Y0:2~83 2,63
    protein:YG:2~182 56~57
    MG:XV:104 75~76
    2030 6of6:XW
    (3.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B5E RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 33~35,37~39
    rna:YA:6~2897 17,19,71,76
    protein:XG:2~156 32,34,39~42
    2031 6of6:XY
    (3.2Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001C39A4 RF00005 Escherichia
    coli
    #1/H766

    1354003
    32601241 Assembly2
    rna:XA:5~1531 34~37
    rna:XX:6~23 34~37
    rna:YA:6~2897 19,37~38,55~56,64,71~72,74~75
    protein:YQ:1~141 52~54
    protein:YZ:1~183 53~58,61~62
    2032 6ofx:5
    (3.3Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31513010 Assembly1
    protein:N:3~129 33~35
    rna:3:2~1540 29~32,34,38~39,41~42
    rna:1:1~2903 74~76
    rna:4:5~24 34~37
    2033 6og7:5
    (3.3Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31513010 Assembly1
    protein:N:3~129 32~33,35
    protein:8:4~364 36~37
    rna:3:2~1540 30~32,34,38~40,42
    rna:1:1~2903 13,24,74
    rna:4:5~24 34~37
    2034 6ogf:5
    (3.9Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31513010 Assembly1
    protein:N:3~129 32~33,35
    protein:8:4~364 36~37
    rna:3:2~1540 29~31,34,38~42
    rna:4:5~24 34~37
    2035 6ogg:5
    (4.2Å)

    73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31513010 Assembly1
    rna:3:2~1540 30,32,34~35,39,43
    rna:1:1~2903 19,56
    rna:4:5~24 34~37
    2036 6ogi:5
    (3.4Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31513010 Assembly1
    protein:N:3~129 31~32,34~35
    rna:3:2~1540 30~31,34,38,40
    rna:1:1~2903 19,56
    rna:4:5~24 34~37
    2037 6oj2:QV
    (3.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:5~1531 30~32,34,38,40~41
    rna:QX:6~24 34~37
    rna:RA:6~2897 11~13,24,74~76
    protein:QI:2~128 33~35
    protein:R0:2~83 2,74
    protein:RG:2~182 19,56~57
    MG:QV:103 75~76
    MG:QV:104 75~76
    2038 6oj2:QW
    (3.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B6F RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:5~1531 35,37
    rna:QX:6~24 34~35
    rna:RA:6~2897 17,19,56,71,76
    protein:QG:2~156 32~33,40~41
    protein:QK:11~129 39~40
    2039 6oj2:QY
    (3.2Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001C39A4 RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:5~1531 34~37
    rna:QX:6~24 34~37
    rna:RA:6~2897 19,37,55~56,64,71,74~75
    protein:QM:2~122 40~41
    protein:RQ:1~141 52~54,62
    protein:RZ:1~183 53~55,57,61
    2040 6oj2:XV
    (3.2Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:6~22 34~37
    rna:YA:6~2897 11~13,24~25,74~76
    protein:XI:2~128 33~35
    protein:XM:2~122 28~29
    protein:Y0:2~83 2,63~64
    protein:YG:2~182 56~57
    MG:XV:102 75~76
    MG:XV:103 75~76
    2041 6oj2:XW
    (3.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B6F RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 36~37
    rna:XX:6~22 34~35
    rna:YA:6~2897 17,19,71~72,76
    protein:XG:2~156 31,33~35,40~42
    2042 6oj2:XY
    (3.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001C39A4 RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 34~35,37
    rna:XX:6~22 34,36~37
    rna:YA:6~2897 19,56~57,64,74~76
    protein:YQ:1~141 52~54
    protein:YZ:1~183 18,53~55,58
    2043 6okk:g
    (3.3Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000035398D RF00005 Plasmodium
    falciparum
    3D7

    36329
    24913268 Assembly1
    rna:A:1~2090 33~34
    2044 6ole:u
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD11 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 34~37
    rna:t:1~5028 19,37,55~57,74~76
    rna:w:13~22 34~37
    protein:Se:2~58 36~37
    protein:K:3~213 2,64,74
    2045 6ole:v
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD31 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 30~32,34,38,40~41
    rna:w:13~22 34~37
    protein:SQ:1~146 32~34
    protein:p:2~106 75~76
    2046 6olf:u
    (3.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD11 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 35~36
    rna:t:1~5028 25,37~38,72,76
    rna:w:13~22 34~37
    protein:Se:2~58 28~29
    protein:K:3~213 54,73
    2047 6olf:v
    (3.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD31 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 30~31,34,38,40~41
    rna:t:1~5028 72,76
    rna:w:13~22 34~37
    protein:SQ:1~146 33,35
    protein:p:2~106 75~76
    2048 6olg:Bv
    (3.4Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    protein:AI:3~213 1,73~74
    protein:AJ:9~177 20,56
    protein:Ao:2~106 19,56
    rna:A2:1~5028 12,74~76
    rna:B1:1~1869 30~31,34,38,40~41
    rna:Bx:43~58 34~37
    MG:Bv:101 5~6
    MG:Bv:102 8~9
    2049 6oli:u
    (3.5Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD11 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 34~37
    rna:t:1~5028 19,37~38,55~57,74~76
    rna:w:13~22 34~37
    protein:Se:2~58 36~37
    protein:K:3~213 2,64,74
    2050 6oli:v
    (3.5Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD31 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 30~32,34,38~41
    rna:t:1~5028 72,76
    rna:w:13~22 34~37
    protein:SQ:1~146 33~34
    protein:p:2~106 75~76
    2051 6olz:Bv
    (3.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    protein:AI:3~213 1,73~74
    protein:AJ:9~177 20,56
    protein:Ao:2~106 19,56
    protein:BQ:8~146 32,34~35
    rna:A2:1~5028 12,74~76
    rna:B1:1~1869 30~31,34,38~41
    rna:Bx:43~58 34~37
    MG:Bv:101 5~6
    2052 6om0:u
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD11 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 34~37
    rna:t:1~5028 19,37~38,55~57,74~76
    rna:w:13~22 34~37
    protein:K:3~213 2,64~65,72~74
    2053 6om0:v
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD31 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 30~31,34,38,40~41
    rna:t:1~5028 4,76
    rna:w:13~22 34~37
    protein:SQ:1~146 33~35
    protein:p:2~106 75~76
    2054 6om6:5
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00021ED8FA RF00005 Escherichia
    coli

    562
    33741965 Assembly1
    rna:1:1~2903 12,74~76
    rna:2:1~1534 30~32,34,38~41
    rna:4:14~18 34~37
    protein:E:2~178 19,56~57
    protein:n:4~130 32~33,35
    protein:W:2~85 1~2
    2055 6om7:u
    (3.7Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD11 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 34~37
    rna:t:1~5028 19,75~76
    rna:w:13~22 34~37
    2056 6om7:v
    (3.7Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEAD31 RF00005 Homo
    sapiens

    9606
    31160784
    1212

    1373
    Assembly1
    rna:S2:1~1869 30~32,34,38,40~41
    rna:t:1~5028 4,72,75~76
    rna:w:13~22 34~37
    protein:p:2~106 75~76
    2057 6ope:QV
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:5~1531 30~32,34,38,40~41
    rna:QX:6~23 34~37
    rna:QY:2~76 52,76
    rna:RA:6~2897 3,11~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:R0:2~83 2,63,76
    protein:RG:2~182 19,56~57
    protein:RQ:1~141 1~2
    MG:QV:101 75~76
    2058 6ope:QY
    (3.1Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B3D RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:5~1531 34~37
    rna:QV:1~76 17,76
    rna:QX:6~23 34~37
    rna:RA:6~2897 19,37~38,55~56,64,71,74~76
    protein:RQ:1~141 53~54
    protein:RZ:1~183 52~55,57~58,61
    2059 6ope:XV
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 29~32,34,38,40~41
    rna:XX:6~23 34~37
    rna:XY:2~76 51~52
    rna:YA:6~2897 11~13,24~25,74~76
    protein:XI:2~128 32~35
    protein:XM:2~122 28~29
    protein:Y0:2~83 2,63~64
    protein:YG:2~182 19,56~57
    MG:XV:101 59~60
    MG:XV:102 75~76
    2060 6ope:XY
    (3.1Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B3D RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:5~1531 34~37
    rna:XX:6~23 34~37
    rna:YA:6~2897 19,37~38,55~56,64,71~72,74~76
    protein:YQ:1~141 52~54
    protein:YZ:1~183 53~58
    2061 6ord:QV
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:4~1533 30~32,34,38~41
    rna:QX:6~23 34~37
    rna:RA:6~2897 3,11~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:R0:8~84 2,63
    protein:RG:2~182 19,56~57
    2062 6ord:QY
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B3D RF00005 Escherichia
    coli

    562
    32601241 Assembly1
    rna:QA:4~1533 34~37
    rna:QX:6~23 34~37
    rna:RA:6~2897 19,37~38,56,64,71,74~76
    2063 6ord:XV
    (3.1Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:4~1533 29~32,34,38,40~41
    rna:XX:6~23 34~37
    rna:YA:6~2897 3,11~12,24~25,74~76
    protein:Y0:8~84 2,63
    protein:YG:2~182 56~57
    MG:XV:103 75~76
    2064 6ord:XY
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0001A24B3D RF00005 Escherichia
    coli

    562
    32601241 Assembly2
    rna:XA:4~1533 34~37
    rna:XX:6~23 34~37
    rna:YA:6~2897 19,37~38,56,64,71,74~76
    protein:YQ:1~141 52~54
    2065 6ore:5
    (2.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 11~12,24,74~76
    rna:2:1~1534 29~32,34,38~41
    rna:4:13~21 34~37
    protein:E:2~178 19,56~57
    protein:W:10~85 63~64
    protein:n:4~130 32~33,35
    MG:5:101 75~76
    MG:5:103 59~60
    2066 6orl:5
    (3.5Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~32,34,38~42
    rna:4:13~21 34~37
    protein:E:2~178 19,56
    protein:n:4~130 32~33,35
    protein:r:2~117 27~28,44
    MG:1:3281 75~76
    2067 6osi:QV
    (4.14Å)

    68 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Thermus
    thermophilus
    HB8

    300852
    33016876 Assembly1
    rna:QA:5~1542 31,41
    rna:RA:6~2897 3,19,70~72,76
    protein:R1:2~96 74~75
    2068 6osi:XV
    (4.14Å)

    68 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00001DEEBE RF00005 Thermus
    thermophilus
    HB8

    300852
    33016876 Assembly2
    protein:Y1:2~94 74~75
    rna:YA:6~2897 19,56,70~71,76
    2069 6osk:5
    (3.6Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~32,34,38,40~42
    rna:4:13~21 34~37
    protein:E:2~178 19,56~57
    protein:n:4~130 32~35
    protein:A:97~355 35~36,74~76
    MG:1:3292 75~76
    2070 6osq:5
    (3.5Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 11~12,24~25,74~76
    rna:2:1~1534 29~32,34,38,40~41
    rna:4:13~21 34~37
    protein:E:2~178 19~20,56~57
    protein:n:4~130 32~33,35
    protein:A:97~355 36,74~76
    MG:5:101 75~76
    2071 6ost:5
    (4.2Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 31,34,38~39,41
    rna:4:13~21 34~37
    protein:E:2~178 19,56~57
    protein:n:4~130 32~33,35
    protein:r:2~117 27~28
    2072 6ot3:5
    (3.9Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~31,34,38,40~41
    rna:4:13~21 34~37
    protein:E:2~178 19,56~57
    protein:n:4~130 32~33,35
    protein:A:6~362 36,73~74
    2073 6otr:QV
    (3.12Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly1
    rna:QA:3~1541 29~32,34,38~41
    rna:QX:3~19 34~37
    rna:RA:6~2897 11~12,24~25,74~76
    protein:QI:2~128 33~35
    protein:R0:3~83 1~2,64
    protein:RG:2~182 19,56
    protein:RQ:1~139 1,64
    MG:QV:102 75~76
    MG:QV:103 75~76
    2074 6otr:QW
    (3.12Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly1
    rna:QA:3~1541 34,36~38
    rna:RA:6~2897 3~4,17A,19,56,70~71,76
    protein:QG:2~156 31~34,40~42
    2075 6otr:XV
    (3.12Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly2
    rna:XA:3~1541 29~32,34,38~41
    rna:XX:3~19 34~37
    rna:YA:6~2897 11~12,24~25,74~76
    protein:Y0:2~83 1~2,63
    protein:YG:2~182 56~57
    MG:XV:102 75~76
    MG:XV:103 75~76
    2076 6otr:XW
    (3.12Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly2
    rna:XA:3~1541 37~38
    rna:YA:6~2897 56,70~71,76
    protein:XG:2~156 32~34,40~41
    2077 6ouo:5
    (3.7Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000EEACF3 RF00005 Escherichia
    coli

    562
    31189921 Assembly1
    rna:1:1~2903 74~76
    rna:2:1~1534 30~31,34,38,40~41
    rna:4:13~21 34~37
    protein:E:2~178 19,56~57
    protein:n:4~130 32~33,35
    protein:A:6~362 36,73~74
    2078 6oxa:QV
    (3.25Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly1
    rna:QA:3~1541 29~32,34,38~41
    rna:QX:3~22 34~37
    rna:RA:6~2897 3,11~12,24~25,74~76
    protein:QI:2~128 32~33,35
    protein:R0:3~83 1~2,64,76
    protein:RG:2~182 19,56~57
    protein:RQ:1~141 1~2
    MG:QV:101 75~76
    MG:QV:103 75~76
    2079 6oxa:QW
    (3.25Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly1
    protein:QG:2~156 32~34,40~42
    rna:RA:6~2897 4,17A,19~20,56,70~71,76
    2080 6oxa:XV
    (3.25Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly2
    rna:XA:3~1541 29~32,34,38,40~41
    rna:XX:3~22 34~37
    rna:YA:6~2897 11~12,24~25,74~76
    protein:Y0:2~83 2,76
    protein:YG:2~182 56~57
    MG:XV:102 75~76
    2081 6oxa:XW
    (3.25Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly2
    protein:XG:2~156 33~34,41
    protein:XK:11~126 39~40
    rna:YA:6~2897 56,71,76
    2082 6oxi:QV
    (3.495Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly1
    rna:QA:3~1541 29~32,34,38~41
    rna:QX:3~20 34~37
    rna:RA:6~2897 11~12,24~25,74~76
    protein:QI:2~128 33~35
    protein:QM:2~121 28~29
    protein:R0:3~83 1~2,64,76
    protein:RG:2~182 19,56~57
    protein:RQ:1~141 52,64
    MG:QV:101 75~76
    2083 6oxi:XV
    (3.495Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    31501867 Assembly2
    rna:XA:3~1541 29~32,34,38~41
    rna:XX:3~20 34~37
    rna:YA:6~2897 11~12,24~25,74~76
    protein:XM:2~120 28~29
    protein:Y0:2~83 1~2,63,76
    protein:YG:2~182 19,56~57
    MG:XV:101 75~76
    2084 6p2h:A
    (2.803Å)

    69 GO:0009113 (P) purine nucleobase biosy... URS000197CF6D RF00167 synthetic
    construct

    32630
    31598729 Assembly1
    GNG:A:101 21~22,47~52,78~79
    NCO:A:102 42~43,54
    NCO:A:103 46~48,50
    NCO:A:104 20~23
    NCO:A:105 17~18,76
    NCO:A:106 40,55~56
    MG:A:108 23~24
    MG:A:110 22~23
    2085 6pmo:B
    (2.65703Å)

    70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005115FB RF00005 Geobacillus
    kaustophilus

    1462
    31740854 Assembly1
    rna:A:128~191 1,73~76
    MG:B:111 48,50
    IR:B:112 55~56
    2086 6pom:B
    (4.9Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005115FB RF00005 Bacillus
    subtilis

    1423
    31740854 Assembly1
    rna:A:13~182 1,18~19,32~36,55,72~75
    2087 6q57:A
    (2.72Å)

    89 GO:0046653 (P) tetrahydrofolate metabo... URS000080DF21 RF01831 Streptococcus
    mutans
    UA159

    210007
    N/A Assembly1
    T0A:A:101 25~26,53~54
    T0A:A:102 7~8,35,42,44,79
    2088 6q8y:m
    (3.1Å)

    75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000E60BA3 RF00005 Saccharomyces
    cerevisiae

    4932
    30911188 Assembly1
    rna:2:1~1798 34~36
    rna:l:32~48 36~37
    rna:BQ:3~3396 3~4,69~70,74~75
    protein:AP:2~106 74~75
    protein:B:20~225 31~33,37,41~42
    2089 6q8y:n
    (3.1Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000E60BDA RF00005 Saccharomyces
    cerevisiae

    4932
    30911188 Assembly1
    rna:2:1~1798 30~32,34,38,40~41
    rna:l:32~48 34~37
    rna:m:1~75 39~40
    rna:BQ:3~3396 11~12,74~76
    protein:F:3~143 32~33,35
    2090 6q95:4
    (3.7Å)

    319 GO:0006401 (P) RNA catabolic process URS000046D244 RF00023 Thermus
    thermophilus
    HB8

    300852
    30765567 Assembly1
    protein:h:2~207 119~122,171~172
    protein:M:6~141 325~326
    protein:5:1~144 8,15~21,318~320
    rna:1:6~2897 23,324,328~329,337,347~349
    2091 6q95:7
    (3.7Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    30765567 Assembly1
    rna:2:5~1531 29~32,34,38,40~41
    rna:8:1~76 39~40
    rna:9:13~18 34~37
    rna:1:6~2897 11~12,24~25,74~76
    protein:W:1~85 1,64,76
    protein:E:2~182 19,56~57
    MG:7:101 75~76
    MG:7:103 9,22,46
    2092 6q95:8
    (3.7Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000E60B80 RF00005 Escherichia
    coli

    562
    30765567 Assembly1
    protein:l:2~156 31~32,40~41
    protein:p:11~129 39~40
    protein:X:8~95 73~74,76
    rna:1:6~2897 17,19,56,71,76
    MG:8:108 59~60
    MG:8:110 53~54,58
    MG:8:111 74~75
    2093 6q97:4
    (3.9Å)

    334 GO:0006401 (P) RNA catabolic process URS00006A1445 RF00023 Escherichia
    coli

    562
    30765567 Assembly1
    rna:1:1~2903 14~15,343,362
    rna:7:1~77 358,360~363
    protein:5:14~158 17~21,333
    protein:h:2~209 117~118,122,131,183~186
    2094 6q97:7
    (3.9Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000052A6C3 RF00005 Escherichia
    coli

    562
    30765567 Assembly1
    rna:1:1~2903 1~3,11~13,26,72~77
    rna:2:1~1534 30~32,35,39~40
    rna:9:1~9 35~38
    rna:4:1~363 1,69,74~76
    MG:7:102 38,40
    MG:7:103 21,59
    2095 6q97:8
    (3.9Å)

    77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS0000093D11 RF00005 Escherichia
    coli

    562
    30765567 Assembly1
    rna:1:1~2903 18~20,57~58,71~72,76~77
    rna:2:1~1534 36~37
    rna:9:1~9 36~37
    protein:l:2~152 34,37,41~42
    MG:8:102 59~61
    2096 6q98:4
    (4.3Å)

    363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli

    562
    30765567 Assembly1
    rna:1:1~2903 3,25,59~61,361~363
    rna:2:1~1534 84,90~91,93~94
    protein:5:11~160 7~8,17,19~21,85,87~88,334~336,
    354

    protein:E:2~178 14,320,343~344
    protein:g:3~227 120,122
    protein:h:2~209 94,99~100,104,106,108,128~129,
    183~187

    protein:j:10~165 96,99
    protein:x:2~84 43,75,315~316
    MG:4:401 362~363
    2097 6q9a:4
    (3.7Å)

    363 GO:0006401 (P) RNA catabolic process URS000037602E RF00023 Escherichia
    coli

    562
    30765567 Assembly1
    rna:2:1~1534 87,89~93,95~96,103
    rna:7:1~76 90~92
    protein:h:2~209 97,100,102~104,106,109,127,184
    ~186

    protein:i:2~206 100,102
    protein:j:10~165 97,99~100
    protein:l:2~153 86~87
    protein:z:2~71 57,78,82
    protein:5:14~131 8,17,19~21,326,333
    2098 6q9a:7
    (3.7Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005F0912 RF00005 Escherichia
    coli

    562
    30765567 Assembly1
    rna:1:1~2903 10~12,24,74~76
    rna:2:1~1534 30~32,34,38,40~41
    rna:4:1~363 34~37
    protein:E:2~178 19,56~57
    protein:n:4~130 32~33,35
    protein:r:2~117 27~28
    MG:7:101 75~76
    MG:7:104 58~60
    2099 6qdv:2
    (3.3Å)

    120 GO:0045131 (F) pre-mRNA branch point b...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005686 (C) U2 snRNP
    URS0000E60B75 RF00004 Homo
    sapiens

    9606
    30705154
    M068_0.6

    504

    M055_0.6

    97
    Assembly1
    rna:6:1~97 1~11,16~17,19~22,25~28
    rna:I:1~167 31~33,35~46
    protein:A:25~2335 14~15,18~24,26,28~30
    protein:D:20~142 33,35~36,47~48,50~51,148~152,1
    75,177

    protein:K:41~335 15,17~18
    protein:O:5~800 8~9,24,28
    protein:P:2~229 19~20
    protein:W:2~163 155~156
    protein:Y:3~94 153,160~167,169~172
    protein:k:6~87 100~102,181~182
    protein:l:1~80 95~96,101~104
    protein:m:13~115 97,103~104,106~107
    protein:n:2~84 99~100,150~151,168,181~183
    protein:o:67~579 37,39,48~53
    protein:p:11~91 98,105
    protein:q:4~75 97~98,103~106
    protein:r:4~76 99~100
    protein:y:100~243 1~3,10~18
    2100 6qdv:5
    (3.3Å)

    75 GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005682 (C) U5 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    URS0000118C49 RF00020 Homo
    sapiens

    9606
    30705154
    1213

    M150_0.6

    1263

    1267

    42

    M158_0.6

    1355

    M025_0.6

    M075_0.6

    185

    s67

    1274

    1392

    1390
    Assembly1
    rna:6:1~97 42~44
    rna:E:-12~2 40,42~44
    protein:A:25~2335 11~15,17,19,23~30,36,38~40,44~
    49,53~59,64~65

    protein:C:56~954 22,25
    protein:J:185~504 32~34,51
    protein:K:41~335 15~16
    protein:L:1~144 67~68
    protein:N:52~357 63~64
    protein:P:2~229 31~32,51~53
    protein:R:1~26 36~37,46~47
    protein:b:6~87 91~92
    protein:e:13~91 88,95
    protein:f:4~75 87~88,93~96
    protein:g:4~76 89~90
    protein:h:1~80 91~94,97
    protein:j:13~115 87,93~96
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.