| # | PDB (Resolution) |
Length | EC number & GO term |
RNAcentral | Rfam | Taxon | PubMed | ATtRACT motif |
Ligand & binding nucleotides |
|---|---|---|---|---|---|---|---|---|---|
| 2201 |
6lau:B (3.109Å) |
55 | GO:0010468 (P) regulation of gene expr... | URS0001A16A77 | RF02885 | Bifidobacterium angulatum 1683 |
31844059 | Assembly2 protein:C:6~96 10~11,17~22,26,36~37 SAH:B:101 8~9,32~33,36 |
|
| 2202 |
6lax:A (2.7Å) |
55 | GO:0010468 (P) regulation of gene expr... | URS0001A16A85 | RF02885 | Bifidobacterium angulatum 1683 |
31844059 | Assembly1 protein:E:6~98 10~12,16~22,24~26,37 SAM:A:101 8~9,32~33,37 |
|
| 2203 |
6lax:B (2.7Å) |
55 | GO:0010468 (P) regulation of gene expr... | URS0001A16A85 | RF02885 | Bifidobacterium angulatum 1683 |
31844059 | Assembly3 protein:C:7~98 10~13,16~22,24,26,36 SAM:B:101 6,8~9,32~34,37 |
|
| 2204 |
6laz:A (2.76Å) |
55 | GO:0010468 (P) regulation of gene expr... | URS0001A16A77 | RF02885 | Bifidobacterium angulatum 1683 |
31844059 | Assembly1 protein:E:7~97 10~12,16~22,26,37 MG:A:101 28~29 E7X:A:102 6,8~9,32~33,36~37 |
|
| 2205 |
6laz:B (2.76Å) |
55 | GO:0010468 (P) regulation of gene expr... | URS0001A16A77 | RF02885 | Bifidobacterium angulatum 1683 |
31844059 | Assembly2 protein:C:7~97 10~12,16~22,26 E7X:B:101 7~9,32~33,37 |
|
| 2206 |
6lqp:3A (3.2Å) |
175 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 39~55,62~73 rna:SA:-7~1791 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 110~112,255~258 protein:3E:3~437 82~88,92~93,323~325 protein:3F:58~570 118,197~199,247~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 112~113,253~256 protein:AE:2~1767 39~40,333 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:B8:13~594 75~76 protein:BE:19~939 62~64 protein:5C:13~553 24,37~40 protein:5D:2~250 55~56,321,323,325,327~329 protein:5F:2~183 24,26,34~35,57~58 protein:5I:1~469 25,28,30~32,34~36,39 protein:5K:7~189 32~33,45 protein:RJ:42~1164 11~14 protein:RN:2~806 7~9 protein:RV:90~330 15,23 |
|
| 2207 |
6lqp:5A (3.2Å) |
523 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,462~468,470~479 protein:SR:3~127 240,267 protein:3D:3~415 480~483,485,505 protein:3E:3~437 259,287~288,309 protein:A4:29~776 83~84,166,168~169 protein:A5:2~589 99~102,113,134~136,147 protein:A9:389~516 8~10 protein:AE:2~1767 469,472 protein:AF:2~512 85~87,90,92,98~102,104,140,142 ,145~147,150,161~162,234~237,2 75 protein:AG:9~896 4~7,63~64,67~68,70,80~82,84~87 ,153 protein:B1:2~856 293~297,303~304,319~323,325~32 6,330~331 protein:B8:13~594 87~90,161~165,233~234,275~281, 307,309~313 protein:BE:19~939 277~282,289~292,295~299,308 protein:B6:2~437 480~482,484,487~492,496~497,53 5,546~547 protein:5B:155~214 170,181,207~208,210~211,219,22 4 protein:5C:13~553 300~302,310,312~313,315~316,32 1~322,328~329,331,350,352,354~ 355,357~358,364~366,368~371,38 5~387,472~474 protein:5D:2~250 192~193,205~207,236,242~245,24 7~248,259~261,270,272~273,424, 427~428,449,453 protein:5F:2~183 332~335,391~398,461~462,474~47 5 protein:5I:1~469 485~486,513~514,523~524 protein:5J:50~216 443~445,553 protein:5K:7~189 460~461 protein:RC:35~312 347~349 protein:RI:6~257 253~258 protein:RJ:42~1164 246,248~249,259~260,406~408,41 1~412,445~447,451~453 protein:RO:10~534 111,122,126~127 protein:RP:18~2439 514,516~518 protein:RQ:251~899 341,374~376,484~487,504,532,53 4~536,588~589 protein:RV:90~330 336~339,382,388~389 protein:RW:112~203 195,254 |
|
| 2208 |
6lqq:3A (4.1Å) |
175 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 39~53,62~73 rna:SA:-7~1791 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 110~112,255~258 protein:3E:3~437 82~88,92~93,323~325 protein:3F:58~570 118,197~199,247~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 112~113,253~256 protein:AE:2~1767 39~40,333 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:B8:13~594 75~76 protein:BE:19~939 62~64 protein:5C:13~553 24,37~40 protein:5D:2~168 55~56,321,323,325 protein:5F:2~183 24,26,34~35,57~58 protein:5I:1~469 25,28,30~32,34~36,39 protein:5K:7~189 32~33,45 protein:RJ:42~1164 11~14 protein:RN:2~806 7~9 protein:RV:90~330 15,23 |
|
| 2209 |
6lqq:5A (4.1Å) |
375 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,464~468,470~479 protein:SR:3~127 240,267 protein:3D:3~415 480~483,485,505 protein:3E:3~437 287~288,309 protein:A4:29~776 83~84,166,168~169 protein:A5:2~589 99~101,147 protein:A9:389~516 8~10 protein:AE:2~1767 469,472 protein:AF:2~512 85~87,90,92,98~101,142,145~147 ,150,161~162,234~237,275 protein:AG:9~896 4~7,63~64,67~68,70,80~82,84~87 ,153 protein:B1:2~856 293~297,303~304,319~323,325~32 6,330~331 protein:B8:13~594 87~90,161~165,233~234,275~281, 307,309~313 protein:BE:19~939 277~282,289~292,295~299,308 protein:B6:2~437 480~482,484,487~492,496~497,53 5,546~547 protein:5C:13~553 300~302,310,312~313,315~316,32 1~322,328~329,331,350,352,354~ 355,357~358,364~366,368~371,38 5~387,472~474 protein:5D:2~168 244~245,247~248,270,449 protein:5F:2~183 332~335,391~395,474~475 protein:5I:1~469 485~486,513~514,523~524 protein:5J:50~216 443~445,553 protein:RC:35~312 347~349 protein:RJ:42~1164 246,248~249,406~408,411~412,44 5~447 protein:RP:18~2438 514,516~518 protein:RQ:251~899 341,374~376,484~487,504,532,53 4~536,588~589 protein:RV:90~330 336~339,382,388~389 |
|
| 2210 |
6lqr:3A (8.6Å) |
175 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 39~53,62~73 rna:SA:-7~1801 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 110~112,255~258 protein:3E:3~437 82~88,92~93,322~325 protein:3F:58~570 118,197~199,247~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 112~113,253~256 protein:AE:2~1767 39~40,333 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:B8:13~594 75~76 protein:BE:19~939 62~64 protein:5C:13~553 24,37~40 protein:5D:2~168 55~56,320,323,325 protein:5F:2~183 23~26,34~35,57~58 protein:5I:1~469 25,28,30~32,34~36,39 protein:5J:50~216 87,312~313 protein:5K:7~189 32~33,45 protein:RJ:42~1164 11~14 protein:RN:2~806 7~9 |
|
| 2211 |
6lqr:5A (8.6Å) |
192 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,464~468,470~479 protein:3D:3~415 480~483,485,505 protein:3E:3~437 287~288,309 protein:A4:29~776 83~84 protein:A9:389~516 8~10 protein:AE:2~1767 469,472 protein:AF:2~512 85~87,90,92,275 protein:AG:9~896 4~7,63~64,67~68,70,82,84~87 protein:B1:2~856 293~297,303~304 protein:B8:13~594 87~90,275~281,307,309~313 protein:BE:19~939 277~282,289~292,295~299,308 protein:B6:2~437 480~482,484,487~492,496~497,53 5,546~547 protein:5C:13~553 300~302,310,312~313,472~474 protein:5I:1~469 485~486,513~514,523~524 protein:RP:18~2438 514,516~518 protein:RQ:251~899 484~487,504,532,534~536,588~58 9 |
|
| 2212 |
6lqs:3A (3.8Å) |
234 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 38~54,62~73 rna:SA:-7~1801 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 33,107,111,255~256,258~259 protein:3E:3~437 68,82~88,90,92~93,323~325,331~ 332 protein:3F:113~570 118,137,165~168,197~199,247,25 1~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 110~113,253~256 protein:AE:2~1767 39~40,142 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:BE:19~939 62~64 protein:B6:2~437 38~39 protein:5C:13~553 24,37 protein:5D:2~250 56,320~326,328~329 protein:5F:2~183 23~24,26,34,36,57~58 protein:5I:1~468 25,28,30~32,34~36,39~40 protein:5J:50~199 87,90,109,312~314 protein:5K:7~189 32~33 protein:RJ:42~1164 12~14 protein:RN:5~806 7~8 protein:RW:6~171 141,174 |
|
| 2213 |
6lqs:5A (3.8Å) |
152 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,464~468,470~479,482 protein:3D:3~415 480~483 protein:3E:3~437 288~290,309 protein:A4:29~776 83~84 protein:A9:389~516 8~10 protein:AF:2~512 85~87,89 protein:AG:9~896 3~7,63~65,67~70,82,84~87 protein:B1:2~856 293~297,303~304 protein:B8:13~594 88~90,278~281,307~313 protein:BE:19~939 277,279,281~284,290~293,295~29 9,308 protein:B6:2~437 479~480,482~484,495,535~536,54 6,585 protein:5C:13~553 300~302,310,312~313,472~474 protein:RQ:245~899 484,536,552 |
|
| 2214 |
6lqt:3A (4.9Å) |
194 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 38~54,62~73 rna:SA:-7~1801 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 33,107,111,255~256,258~259 protein:3E:3~437 68,82~88,90,92~93,323~325,331~ 332 protein:3F:113~570 118,197~199,247,251~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 110~113,253~256 protein:AE:2~432 39~40 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:BE:19~939 62~64 protein:B6:2~437 38~39 protein:5C:13~553 24,37 protein:5F:2~183 23~24,26,34,36,57~58 protein:5I:1~468 25,28,30~32,34~36,39~40 protein:5J:50~199 87,90,109,312~314 protein:5K:7~189 32~33 protein:RJ:42~1164 12~14 protein:RN:754~806 7~8 |
|
| 2215 |
6lqt:5A (4.9Å) |
152 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,464~468,470~479,482 protein:3D:3~415 480~483 protein:3E:3~437 288~290,309 protein:A4:29~776 83~84 protein:A9:472~508 8~10 protein:AF:2~512 85~87,89 protein:AG:9~896 3~7,63~65,67~70,82,84~87 protein:B1:2~856 293~297,303~304 protein:B8:13~594 88~90,278~281,307~313 protein:BE:19~939 277,279,281~284,290~293,295~29 9,308 protein:B6:2~437 479~480,482~484,495,535~536,54 6,585 protein:5C:13~553 300~302,310,312~313,472~474 protein:RQ:245~899 484,536,552 |
|
| 2216 |
6lqu:3A (3.7Å) |
175 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 39~55,62~73 rna:SA:-7~1791 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 110~112,255~258 protein:3E:3~437 82~88,92~93,323~325 protein:3F:58~570 118,197~199,247~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 112~113,253~256 protein:AE:2~1767 39~40,333 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:B8:13~594 75~76 protein:BE:19~939 62~64 protein:5C:13~534 24,37~40 protein:5D:2~250 55~56,321,323,325,327~329 protein:5F:2~183 24,26,34~35,57~58 protein:5I:1~469 25,28,30~32,34~36,39 protein:5K:7~189 32~33,45 protein:RJ:42~1164 11~14 protein:RN:2~806 7~9 protein:RV:90~330 15,23 |
|
| 2217 |
6lqu:5A (3.7Å) |
523 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,462~468,470~479 protein:SR:3~127 240,267 protein:3D:3~415 480~483,485,505 protein:3E:3~437 259,287~288,309 protein:A4:29~776 83~84,166,168~169 protein:A5:2~589 99~102,113,134~136,147 protein:A9:389~516 8~10 protein:AE:2~1767 469,472 protein:AF:2~512 85~87,90,92,98~102,104,140,142 ,145~147,150,161~162,234~237,2 75 protein:AG:9~896 4~7,63~64,67~68,70,80~82,84~87 ,153 protein:B1:2~856 293~297,303~304,319~323,325~32 6,330~331 protein:B8:13~594 87~90,161~165,233~234,275~281, 307,309~313 protein:BE:19~939 277~282,289~292,295~299,308 protein:B6:2~437 480~482,484,487~492,496~497,53 5,546~547 protein:5B:155~214 170,181,207~208,210~211,219,22 4 protein:5C:13~534 300~302,310,312~313,315~316,32 1~322,328~329,331,350,352,354~ 355,357~358,364~366,368~371,38 5~387,472~474 protein:5D:2~250 192~193,205~207,236,242~245,24 7~248,259~261,270,272~273,424, 427~428,449,453 protein:5F:2~183 332~335,391~398,461~462,474~47 5 protein:5I:1~469 485~486,513~514,523~524 protein:5J:50~216 443~445,553 protein:5K:7~189 460~461 protein:RI:6~257 253~258 protein:RJ:42~1164 246,248~249,259~260,406~408,41 1~412,445~447,451~453 protein:RO:10~534 111,122,126~127 protein:RP:18~2439 514,516~518 protein:RQ:251~899 341,374~376,484~487,504,532,53 4~536,588~589 protein:RV:90~330 336~339,382,388~389 protein:RW:112~203 195,254 |
|
| 2218 |
6lqv:3A (4.8Å) |
175 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000B21E09 | RF01846 | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:5A:2~591 39~53,62~73 rna:SA:-7~1758 1~13,15~22,25~28 protein:3C:86~322 318~319 protein:3D:3~415 110~112,255~258 protein:3E:3~437 82~88,92~93,322~325 protein:3F:58~570 118,197~199,247~253 protein:3G:5~125 79~82,326~327 protein:3H:5~125 112~113,253~256 protein:AE:2~1767 39~40,333 protein:AG:9~896 76~77,333 protein:B1:2~856 58~61 protein:B8:13~594 75~76 protein:BE:19~939 62~64 protein:5C:58~466 24,37~40 protein:5D:2~168 55~56,320,323,325 protein:5F:2~183 23~26,34~35,57~58 protein:5I:1~469 25,28,30~32,34~36,39 protein:5J:50~216 87,312~313 protein:5K:7~189 32~33,45 protein:RJ:42~1164 11~14 protein:RN:2~806 7~9 |
|
| 2219 |
6lqv:5A (4.8Å) |
171 | GO:0034463 (P) 90S preribosome assembly | URS000007769E | N/A | Saccharomyces cerevisiae S288C 559292 |
32943522 | Assembly1 rna:3A:1~333 281~292,464~468,470~479 protein:3D:3~415 480~483,485,505 protein:3E:3~437 287~288,309 protein:A4:29~776 83~84 protein:A9:389~516 8~10 protein:AE:2~1767 469,472 protein:AF:2~512 85~87,90,92,275 protein:AG:9~896 4~7,63~64,67~68,70,82,84~87 protein:B1:2~856 293~297,303~304 protein:B8:13~594 87~90,275~281,307,309~313 protein:BE:19~939 277~282,289~292,295~299,308 protein:B6:2~437 480~482,484,487~492,496~497,53 5,546~547 protein:5C:58~466 300~302,310,312~313,472~474 protein:5I:1~469 485~486 protein:RQ:320~880 484,486~487,504,532,534~536,58 8~589 |
|
| 2220 |
6lt7:C (2.7Å) |
49 | EC:3.1.-.- GO:0000171 (F) ribonuclease MRP activity GO:0006364 (P) rRNA processing GO:0000172 (C) ribonuclease MRP complex |
URS00021ED90E | RF00030 | synthetic construct 32630 |
33571640 | Assembly1 protein:A:17~140 24,28~35,55,57~58,61 protein:B:9~158 32,35~39,46~48,53~54,56 |
|
| 2221 |
6lt7:F (2.7Å) |
49 | EC:3.1.-.- GO:0000171 (F) ribonuclease MRP activity GO:0006364 (P) rRNA processing GO:0000172 (C) ribonuclease MRP complex |
URS00021ED90E | RF00030 | synthetic construct 32630 |
33571640 | Assembly1 protein:D:17~140 23~24,28~35,55,57~58,61 protein:E:9~158 32,35~37,46~48,56 |
|
| 2222 |
6lvr:B (2.85Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000011107D | RF00005 | Saccharomyces cerevisiae 4932 |
32719843 | Assembly2 protein:A:95~293 19~20,54~57 |
|
| 2223 |
6lvr:D (2.85Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000011107D | RF00005 | Saccharomyces cerevisiae 4932 |
32719843 | Assembly1 protein:C:94~293 19~20,55~57 |
|
| 2224 |
6lxd:D (3.9Å) |
72 | GO:0035195 (P) miRNA-mediated post-tra... GO:0016442 (C) RISC complex |
URS0001A16A8F | RF00455 | Homo sapiens 9606 |
32220645 | Assembly1 protein:A:409~1364 11~15,22~25,32~33,36,71~76,84, 86~88,93~94,96~97 |
|
| 2225 |
6m62:1 (3.2Å) |
2972 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
32719344 | Assembly1 rna:2:1~158 3~23,59,143,330~337,339~342,34 5~346,349,351,368~369,404~419, 656~657,691,1394~1395,1398~139 9,1419,1441,1530,1584,1830~183 2,2386,2994~2995 rna:6:1~232 1,3,1570 protein:4:19~578 1602,1762~1765 protein:5:42~114 1003,1048,1216,1219~1220,1286, 2710 protein:A:2~214 822~825,860,896,905,909~912,91 4,925,1580,1650,1793~1796,2147 ~2149,2157~2159,2163~2164,2174 ~2181,2184~2187,2522,2525~2526 ,2550~2551,2553~2555,2557~2558 ,2967~2968 protein:B:2~387 1305,1886~1889,1891,2340,2392~ 2395,2880~2882,2915~2916,2938~ 2940,2943~2944,2947,2981,2987~ 2991,3000~3004,3009~3011,3037~ 3039,3044~3047,3049,3086~3087, 3089,3096~3099,3137~3140,3146~ 3151,3242~3244,3293~3297,3304~ 3307,3309~3310,3313~3316,3329~ 3331,3369~3371,3375,3377~3379 protein:C:2~362 208~212,329,336~341,343,346~34 7,356~357,364~366,505,514~515, 519~520,578~579,596,599,608~61 0,658,660~662,664,673~674,681~ 682,689,691~696,789~790,800,80 2~805,933,1346~1347,1349,1359~ 1360,1380~1384,1386~1388,1419~ 1420,1424~1425,1427,1429,1435~ 1436,1438~1439,2813~2814 protein:D:7~297 2661~2663,2688~2689,2702~2704, 2746~2750 protein:E:2~176 500~503,591~593,607~609,611~61 2,1353~1354,1385,1422,3176,321 5~3216,3267~3274,3276 protein:F:23~244 519~520,576~578,595~597,984~98 7,1100~1102,1157~1159,1167~116 8,1170~1171,1333~1334,1361~136 3 protein:G:24~256 7,117,119~121,123,145~148,1557 ~1558,1579,2511~2512,2514,2523 ~2526,2549~2550,2561~2563,2580 ,2585~2588 protein:H:1~191 1211,2894,2899~2902,3020,3024, 3026,3032,3034~3035,3108~3113, 3122~3124,3126,3186~3188,3198 protein:I:1~131 1894~1895,1897,1936,1938,2106, 2111~2113,3054,3083~3085 protein:J:6~174 2628~2629,2664,2671~2674,2676~ 2677,2679~2682,2684 protein:L:8~194 38,47,66,73~77,96~98,102~104,1 06~108,110,156,169~170,314,684 ~687,691,699~700,712~713,766~7 68,798~799,2775,2781~2782 protein:M:2~138 525,534,559~562,1185,3204~3206 ,3208,3210~3215,3227,3229,3260 ~3261 protein:N:2~204 19,29~33,35,49,56,58,61~66,69, 77,80~82,100,112,115~116,126,1 49~151,267~269,277,282,286,288 ~291,294,319~322,683,692,908~9 09,1543,1545~1547,2166,2516 protein:O:3~199 632,1174~1176,1181,1189,1191~1 193,1306~1307,1312~1316,1318,2 382~2383,2987~2988,3005~3008,3 133,3172,3178,3180~3183,3185,3 190~3191,3242~3244 protein:P:2~184 382,388~389,398,402,412~413,61 7,619~621,879~881,883,1447~144 8,1504~1505,1507~1508,1846~184 7,2351~2357,2388~2389,2991,321 7,3268,3270,3276~3277,3298~329 9,3308,3310,3393 protein:Q:15~148 671~673,676~677,727~730,741~74 5,780,784~787,974,976,1348 protein:R:2~157 832~833,840,854~856,1471~1474, 1498,1512,1601~1603,1663~1664, 1672,1689~1690,1718~1724,1766, 1779,1862,1864,1872~1875,1914~ 1917,1938~1939,1941~1942,1947, 1949,2101,2103~2104,2115,3067~ 3070 protein:S:2~172 519,522~523,534~535,562~563,99 7,1054,1186,1211,1213~1214,129 5,1316,1320~1322,3185~3186,320 5~3208 protein:T:32~156 968,989~993,1059~1060,1062~106 3,1068,1092,1095~1099,2648~264 9 protein:U:9~114 1676~1679,1682,1686~1688,1757 protein:V:2~137 1896~1899,1901,2338~2339,2916~ 2917,2931~2932,3040~3041,3043, 3051,3092~3093,3095 protein:W:1~234 1207~1211,1221~1222,1225~1226, 1229~1232,1256~1260,1265,1268~ 1269,1273,1278~1283,1290,3115, 3117 protein:X:2~142 1~2,14,16~18,129,1521~1524,155 8~1560,1580~1581,1601,1608~160 9,1830~1832,2523 protein:Y:2~127 186,190,198,200,213~218,224,22 9,335~336,378,392,394 protein:Z:2~136 1629,1631~1638,1710~1711,1807, 1811,2555~2556,2563,2572~2573 protein:a:57~149 84~85,87~89,100,283,304~305,70 5,710,714~716,718,2777 protein:b:1~647 355,376~377,401~402,877,880,88 3~884,1129,1242,1270,1474~1475 ,1503~1504,1517~1519,1680~1682 ,2139~2140,2403~2404,2820~2821 ,2825~2830,2862~2863,2870~2872 ,2887~2888,2898,2901,2938,2955 ,2979,3019,3027~3028,3037 protein:c:9~105 1715,1728~1730,2552~2553 protein:d:6~112 1455~1460,1474,1476,3056,3058~ 3059,3323~3325,3373~3374,3376, 3383~3386 protein:e:2~128 424~425,590,635,638~639,655,94 4~947,1144~1147,1160~1162,1338 ~1340,1368,1388~1389,1391~1392 ,1402~1408,1410~1412,1433 protein:f:2~107 428~432,509,583~585,620,622,63 1~634,1148~1149,1151,1167,1177 ~1180,1326~1327,1329,3169,3171 ~3176,3213~3214,3218~3219,3275 ,3278~3279 protein:g:2~113 1481,1483,1485~1486,1488~1489, 1527,1589~1590,1597~1598,1606, 1638~1640,1643,1653~1655,1694, 1707~1708,1738~1741,1802~1803, 1805~1806,1821,1835,1854~1859, 2553~2555 protein:h:2~120 20,112,128,135~136,152 protein:i:2~100 73,156~157,264,266,271,273,293 ,295~299,309,316~317,2445,2505 protein:j:2~88 22~24,53,55,353,359~364,812~81 8,884~885,921,929,1490,1844~18 45,1851~1852,2138~2139 protein:k:2~78 1612~1613,1746~1748,1750~1751, 1825~1826 protein:l:2~51 351,1490,1492~1495,1517,1588,1 833~1834,1841~1843 protein:m:18~472 1248~1249,1921,1932~1934,2124~ 2127,2329,2332,2407~2408,2418~ 2419,2614~2615,2713,2716~2718, 2725~2726,2728~2730,2798~2800, 2804~2805,2861,2867~2870,2920~ 2923,2925,2929,2961~2966,2971 protein:n:1~460 6~7,142~143,1563~1566,1568~156 9,1571~1574,1593,1616~1620,164 5,1647,1809~1811,1819,1829~183 0 protein:p:2~92 836~838,851,858,860,1729,1791~ 1793,1795,1926~1927,2131,2188~ 2189,2320 protein:q:199~455 2,1566~1568,1576~1578,1812~181 4,2560,2572,2575,2577~2578,258 4~2585 protein:r:2~261 1129,1205~1209,1298~1301,2726~ 2730,2740~2741,2808,2828,2831~ 2833,2851,2857~2858,2871,2873~ 2874,2896,2898,2900,2953~2954, 2970~2971,3026~3027,3114,3118~ 3121 protein:s:1~77 1120,1131,1192,1195,1197~1200, 1215,1303,1308~1310,2369~2371, 2823~2824,2886,2911 protein:t:15~322 4,1570~1571,2568~2570 protein:u:1~150 2111~2112,3050~3052,3084~3085, 3332~3334,3367~3369 protein:v:9~253 2658~2659,2694,2698,2705 protein:w:9~201 2620~2625,2656,2715~2716,2725, 2734,2740~2741,2754,2756~2759, 2796 protein:y:1~244 3018~3019 protein:z:2~56 3012~3013,3015,3036~3037,3100, 3129~3130 |
|
| 2226 |
6m62:2 (3.2Å) |
158 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
32719344 | Assembly1 rna:1:1~3396 1,3~22,24~33,35~37,40~41,53,10 4,109,113~115,136~137,139~150, 152~156 protein:4:19~578 78~80 protein:C:2~362 21~22,26~27 protein:G:24~256 149~150,152~153,155 protein:L:8~194 28~30 protein:N:2~204 141~143 protein:P:2~184 3,11~12 protein:X:2~142 99,131~135,137,147,151,156~157 protein:Y:2~127 22~25,70~75,83~85,87,91 protein:b:1~647 50~51,75 protein:h:2~120 35~38,49,60,63~66,86~87,97~98 protein:j:2~88 34~35,41~43,57~58,67~68,94~95, 104,111 protein:l:2~51 45~46,50~53,75,113 protein:n:1~460 119~120,127~130,147~148 protein:q:199~455 120~121,127,151~152 protein:t:15~322 157~158 |
|
| 2227 |
6m62:3 (3.2Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
32719344 | Assembly1 protein:5:42~114 34~40 protein:D:7~297 1~2,4~11,13~14,22~23,25~27,32~ 33,35,45~50,61~62,64,68,109,11 1~112,115,117~121 protein:J:6~174 16~18,27~29,39~40,42~43,55~57 protein:v:9~253 9~10,73,77,100~103,114 |
|
| 2228 |
6me0:A (3.6Å) |
829 | GO:0000373 (P) Group II intron splicing | URS0000EEAD0D | RF02012 RF00029 |
Thermosynechococcus vestitus 146786 |
31348888 | Assembly1 dna:B:1~16 120,137,259,261~262,265~267,29 4,327~332,365,792,812,866 protein:C:27~456 137,247~248,259,261,294,325~32 6,362~363,592~595,624~625,628~ 629,631~633,650~653,727~730,74 0~741,762~764,766,768~770 MG:A:901 793,815,866 MG:A:902 6~7,401 MG:A:904 10~11 MG:A:905 479~480,818 MG:A:907 143,183 MG:A:926 783~784 MG:A:933 813,815 NA:A:932 825,827 |
|
| 2229 |
6mec:A (3.6Å) |
818 | GO:0000373 (P) Group II intron splicing | URS0002617737 | RF02012 RF00029 |
Thermosynechococcus vestitus 146786 |
31348888 | Assembly1 dna:B:1~14 120,136~137,259,261~262,265~26 7,327~332 protein:C:27~456 137,247,249,259,261,294,325~32 7,361~365,592,594~595,624~625, 627~633,647,650~652,727~730,74 0~741,763~764,766,768~770,828~ 831,863 MG:A:901 792,815 MG:A:902 5~6 MG:A:903 812~813 MG:A:904 815,817 MG:A:905 157~158 MG:A:907 486~487 MG:A:908 28,215 MG:A:911 90~91 MG:A:914 742~743,761 MG:A:915 98~99 NA:A:951 19~20,394~395 |
|
| 2230 |
6mj0:A (3.1Å) |
101 | GO:0006417 (P) regulation of translation GO:0046782 (P) regulation of viral tra... |
URS0000E60B65 | RF00233 RF00390 |
Turnip yellow mosaic virus 12154 |
30498211 | ||
| 2231 |
6mj0:B (3.1Å) |
101 | GO:0006417 (P) regulation of translation GO:0046782 (P) regulation of viral tra... |
URS0000E60B65 | RF00233 RF00390 |
Turnip yellow mosaic virus 12154 |
30498211 | ||
| 2232 |
6mtb:4 (3.6Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000086855F | RF00005 | Oryctolagus cuniculus 9986 |
30355441 | Assembly1 rna:5:1~5069 18~19,56~57 protein:o:2~104 74,76 protein:u:5~210 54,61~63 |
|
| 2233 |
6mtc:4 (3.4Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000086855F | RF00005 | Oryctolagus cuniculus 9986 |
30355441 | Assembly1 rna:5:1~5069 18~19,56~57 protein:o:2~104 73~74 protein:u:5~210 54~55,62~63 protein:ZZ:41~115 34~35 |
|
| 2234 |
6n1d:APTN (3.2Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30936299 | Assembly1 rna:A16S:3~1542 30~32,34,40~41 rna:A23S:6~2897 4,17,19,70~71,76 rna:AMRN:6~18 35,37 protein:AL01:2~229 56,62 protein:AS09:2~128 32~33,35 protein:AS13:2~118 28~29 |
|
| 2235 |
6n1d:BATN (3.2Å) |
85 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002D9DE2 | RF00005 | Escherichia coli 562 |
30936299 | Assembly2 rna:B16S:3~1542 30,34,38 rna:B23S:6~2897 12~13,23,72,74~76 rna:BMRN:4~20 34~37 rna:BPTN:1~76 32,38,41~42 protein:BL05:2~182 47E,56~57 protein:BL27:4~85 1~3,63~64,73~74 |
|
| 2236 |
6n1d:BPTN (3.2Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30936299 | Assembly2 rna:B16S:3~1542 31~32,34,37,40~41 rna:B23S:6~2897 4,19,56,70~71,76 rna:BATN:1~76 28~29,35~36 protein:BL28:8~95 74~75 protein:BS09:2~128 32~33,35 |
|
| 2237 |
6n5k:A (3.098Å) |
125 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF5B | RF00379 | Homo sapiens 9606 |
N/A | ![]() M145_0.6 ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() M153_0.6 ![]() 1367 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() 1264 ![]() 467 |
Assembly1 2BA:A:201 5~8,48,71~75,85~86,110~112 2BA:A:202 9,26~29,44~46,91~92,96,105~106 MG:A:203 30,97~99 MG:A:205 2,8 K:A:204 1~2,11~12 SO4:A:206 98~99 |
| 2238 |
6n5n:A (2.951Å) |
125 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF65 | RF00379 | Homo sapiens 9606 |
N/A | ![]() M145_0.6 ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() M153_0.6 ![]() 1367 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() 1264 ![]() 467 |
Assembly1 2BA:A:201 5~8,48,71~75,85~86,110~111 2BA:A:202 9,26~29,44~46,91~92,96,105~106 MG:A:203 30,97~99 K:A:204 1~2,11~12 SO4:A:206 98~99 SO4:A:208 2~3 |
| 2239 |
6n5o:A (2.708Å) |
126 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF62 | RF00379 | Homo sapiens 9606 |
N/A | ![]() M145_0.6 ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() M153_0.6 ![]() 1367 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() 1264 ![]() 467 |
Assembly1 2BA:A:201 5~8,49,72~76,86~87,112~113 2BA:A:202 9,27~30,45~47,92,97,106~107 MG:A:203 31,98~100 MG:A:207 8,74 K:A:205 1~2,11~12 SO4:A:208 99~100 |
| 2240 |
6n5p:A (2.991Å) |
127 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF7A | RF00379 | Homo sapiens 9606 |
N/A | ![]() M145_0.6 ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() M153_0.6 ![]() 1367 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() 1264 ![]() 467 |
Assembly1 2BA:A:201 5~8,50,73~77,87~88,113 2BA:A:202 9,28~31,46~48,93,98,107~108 MG:A:203 32,99~101 K:A:205 1~2,11~12 |
| 2241 |
6n5q:A (2.946Å) |
128 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF57 | RF00379 | Homo sapiens 9606 |
N/A | ![]() M145_0.6 ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() M153_0.6 ![]() 1367 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() 1264 ![]() 467 |
Assembly1 2BA:A:201 5~8,51,74~78,88~89,113~114 2BA:A:202 9,29~32,47~49,94,99,108~109 MG:A:203 33,100~102 K:A:205 1~2,11~12 SO4:A:208 101~102 |
| 2242 |
6n5s:A (2.802Å) |
123 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF70 | RF00379 | Homo sapiens 9606 |
N/A | ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() M153_0.6 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() 1264 ![]() 467 |
Assembly1 2BA:A:202 5~8,47,70~74,84~85,109~111 2BA:A:203 9,25~28,43~46,90,95,104~105 MG:A:204 29,96~98 MG:A:208 8,72 K:A:206 1~2,11~12 SO4:A:209 97~98 |
| 2243 |
6n5t:A (2.787Å) |
126 | GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr... |
URS000197CF7C | RF00379 | Homo sapiens 9606 |
N/A | ![]() M145_0.6 ![]() M269_0.6 ![]() 1311 ![]() M024_0.6 ![]() M347_0.6 ![]() s16 ![]() 1264 ![]() 1367 ![]() s55 ![]() 354 ![]() s50 ![]() M065_0.6 ![]() M153_0.6 ![]() 467 |
Assembly1 2BA:A:201 5~7,49,72~76,86~87,112 2BA:A:202 9,27~30,45~48,92~93,97,106~107 MG:A:203 31,98~100 MG:A:204 29,47 K:A:205 1~2,11~12 SO4:A:208 99~100 |
| 2244 |
6n7p:R (3.6Å) |
558 | GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0005685 (C) U1 snRNP GO:0000243 (C) commitment complex |
URS000012D749 | RF00488 | Saccharomyces cerevisiae S288C 559292 |
31485080 | Assembly1 protein:A:1~188 34,559~561,563~565 protein:B:3~197 9,63~66,132~133,135,251,254,25 6~258,264~268,284~286,297~299 protein:C:2~148 59~60,62,66~68,140~145,147~150 ,385,423,425~426 protein:D:1~544 74~75,114~116,118,253~254,256, 268 protein:G:43~295 79,86,106~107,117~119 protein:I:4~244 5~6,8,551 protein:K:4~132 122~123,156~159,173,278~280,29 7,302,556,561 protein:L:1~119 35,549,557,559,562 protein:M:2~108 550~552,558~560 protein:N:2~94 114,542,555 protein:P:12~85 552~553,558~559 rna:r:-9~13 1,3~10,289,292~293 |
|
| 2245 |
6n7r:R (3.2Å) |
558 | GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000395 (P) mRNA 5'-splice site rec... GO:0005685 (C) U1 snRNP |
URS000012D749 | RF00488 | Saccharomyces cerevisiae 4932 |
31485080 | Assembly1 protein:A:1~188 34,121,559~561,563~565 protein:B:3~197 8~9,61,63~66,133,135,137,251~2 52,254~258,260,264~268,284,286 ,297~299 protein:C:1~148 58~60,62,67~68,141~145,147~150 ,385,424~426 protein:D:1~541 74~75,114~115,253~254,256,268 protein:G:44~295 79,86,118~119 protein:I:4~244 5~8 protein:K:4~132 122~123,157~159,171,173,279,29 7~298,302,556,561 protein:L:1~119 35,548~549,557,559,562 protein:M:2~108 550~552,558~560 protein:N:5~95 114,541,555 protein:O:9~92 553,560 protein:P:12~85 552~553,559~560 rna:r:-2~156 1~10 |
|
| 2246 |
6n7x:R (3.6Å) |
308 | GO:0030627 (F) pre-mRNA 5'-splice site... GO:0000395 (P) mRNA 5'-splice site rec... GO:0000398 (P) mRNA splicing, via spli... GO:0005685 (C) U1 snRNP GO:0000243 (C) commitment complex |
URS000012D749 | RF00488 | Saccharomyces cerevisiae S288C 559292 |
29051543 | Assembly1 protein:A:1~188 34,559~561,563~565 protein:B:3~196 63~66,133,135,251~252,254~258, 264~268,284~286,297~299 protein:C:3~148 58~68,134,136,141~142,149~150 protein:D:2~540 74~75,113,115~116,120,253~254, 256,258,268 protein:G:45~293 79,86,117~119 protein:K:3~133 121~123,157~159,171,278~280,55 6 protein:L:1~119 19,35~36,556~557,559,562 protein:M:13~108 550,552,558~560,562,565 protein:N:5~96 114,542,555 protein:O:10~92 553,560 protein:P:12~83 552~553,558~560 protein:Q:2~76 112,554~555 |
|
| 2247 |
6n8j:1 (3.5Å) |
3047 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:D:8~277 1077~1080,1083,2663~2664,2688, 2703,2746~2749 protein:J:7~171 2671~2677,2680~2684 protein:A:2~246 821~825,860,896,910~912,914,91 6,1579,1650~1651,1793~1795,214 6~2150,2153~2155,2157~2158,216 2~2164,2173~2186,2202~2203,224 1~2245,2415,2424~2426,2522,252 4~2525,2548,2550~2551,2554,255 7~2558,2606~2608,2961,2964~296 5,2967~2968 protein:a:56~149 70~71,88~90,283,304,705,709,71 4~716,771,782,2777,2787~2788 protein:B:2~387 875,1305,1886~1889,1908,2337~2 338,2340~2341,2366,2392,2394~2 395,2878,2880~2883,2915~2916,2 939~2941,2943~2944,2947,2981,2 987~2991,3001~3004,3009,3011,3 037~3039,3044~3047,3049,3086~3 088,3090,3096~3099,3137~3140,3 146~3150,3241~3244,3294~3297,3 304~3307,3313~3316,3329~3330,3 368~3370,3375,3377~3379 protein:b:1~647 355~356,401~402,877,883~885,11 28,1242,1270,1475~1477,1503~15 05,1517~1519,1680~1681,1683,18 46,2140,2401,2403~2404,2820~28 21,2825~2830,2858,2860~2863,28 65~2866,2868~2872,2887~2889,28 98~2899,2937~2938,2942,2978,30 27~3028,3037 protein:C:2~362 208~212,336~341,343~344,346~34 7,355~357,363~366,504~506,514~ 516,519~520,578~579,590,594~59 6,599,608~610,658~660,662,664, 673~675,680~681,689,691~696,78 9~790,800,802~805,929,933,1346 ~1347,1349~1350,1360~1361,1380 ~1386,1419~1420,1424~1426,1429 ,1436,1438~1439,2400~2402,2814 protein:c:9~105 1713,1728~1730,2552~2553 protein:d:6~112 1455~1460,1474~1476,1883,3056, 3058~3059,3073~3074,3076,3323~ 3325,3372~3374,3376,3384,3386 protein:E:2~176 499,501~503,591,593,607~609,61 1~612,617,1353~1354,1385,1422~ 1423,3176,3215~3216,3219,3267~ 3273,3276 protein:e:2~128 423~425,438,638~640,655,944~94 7,1144~1147,1160~1162,1338~133 9,1388~1389,1392~1393,1403~140 8,1410~1413,1433 protein:F:23~244 508,517,520,576~578,595~598,98 4~986,1100~1103,1138~1139,1155 ,1158~1159,1167~1171,1333~1335 ,1362~1364 protein:f:2~107 428~432,498~499,509,583~586,62 0,622,624,631~633,1150,1166~11 67,1177~1180,1326~1330,3170~31 76,3215,3218~3219,3275,3277~32 78 protein:G:24~253 117,119~121,123,144~148,1557~1 558,2436~2437,2514,2523~2526,2 528~2529,2549~2550,2561~2563,2 580,2584~2588 protein:g:2~113 1481,1483,1485,1487~1489,1527, 1589~1593,1597~1598,1606,1638~ 1640,1643,1653~1655,1694~1695, 1708,1738~1740,1801~1805,1821, 1854~1858,2552~2553,2555 protein:I:1~131 1894~1895,1897~1898,1910~1911, 1935~1938,2112~2113,2333,3054, 3083 protein:H:1~188 2894,2898~2901,3025~3026,3032, 3034,3108~3115,3123,3126,3186~ 3187,3198 protein:h:2~120 17~20,112,128,135~136,152,154 protein:i:3~98 72~73,155~157,264~266,271,273, 293,295~298,309,315~316,2216,2 218,2445~2446,2504~2505 protein:j:2~86 23,53,55,347,353,359~364,812~8 13,815~817,884,901,921~922,929 ~930,1490,1492,1548,1844~1845, 1851~1852,2138~2139 protein:k:2~78 1612~1613,1699,1746~1748,1750~ 1751,1825~1826 protein:m:2~468 1126~1127,1242,1248~1249,1921, 1934,2124~2126,2128~2129,2191~ 2192,2200,2247~2248,2312,2316~ 2317,2328~2329,2331,2418~2420, 2603~2605,2615,2644~2646,2804, 2861,2867~2871,2961~2962,2964~ 2965,2971 protein:L:8~194 38,48~49,66,72~77,86,97~98,102 ~104,106~108,110,156,169,326,6 65,683,685~687,691,699~700,712 ~713,765,768~770,797~799,2774, 2780 protein:l:2~51 351,402,1492~1495,1517~1518,15 88,1833~1834,1844 protein:M:2~138 524~525,534,559~562,1184~1186, 3186,3199,3204,3206,3208,3210~ 3215,3227,3229,3260~3261 protein:p:2~92 836~837,850,856,858,860,1727,1 791~1793,1795,1925~1927,2131,2 188~2190,2320 protein:N:2~204 9,18~19,29~33,35,43~45,49,56~5 8,61~64,66,69,77,80~82,99,113~ 116,126,144,147~149,151,267~26 9,276~277,280,282,286~291,294, 303,319,321~322,665,692,908~90 9,1543~1544,1546~1547,2166,242 2,2424~2425,2433,2435,2515~251 6,2598~2600,2609 protein:u:1~149 2111,3050~3052,3084~3085,3332~ 3334,3366~3367,3369 protein:O:3~199 632,1174~1176,1181,1189~1191,1 193,1306~1307,1312~1316,1318,2 382~2384,2987~2988,3006~3009,3 133,3135,3172~3173,3178~3185,3 190,3243~3244 protein:P:2~184 382,388~389,398,402,412~413,61 6~617,620,879~880,883,1446~144 8,1504~1505,1507~1508,1846~184 7,2350~2357,2389,2991,3270~327 1,3274,3276~3277,3298~3299,330 8~3310,3392 protein:Q:4~157 670~673,676~677,720,727~730,74 3~746,784~786,949~950,974~977, 1103,1109,1342~1343,1347~1349, 1364,2729 protein:R:2~155 832~833,854~856,1471~1473,1498 ,1513,1600~1602,1671~1672,1690 ,1716,1718~1724,1764~1765,1779 ,1864,1871~1875,1914~1917,1938 ~1940,1942,1947~1949,2093,2104 ,2115,3067~3069 protein:r:2~261 1127~1128,1205~1209,1270,1298~ 1300,2828~2829,2831~2832,2838, 2852,2856~2858,2870~2871,2873~ 2874,2898,2900,2908~2909,2962, 2970~2972,3026~3028,3109~3110, 3118~3121 protein:S:2~171 519,523,534~535,562~563,1182,1 186~1187,1212~1214,1294~1295,1 320~1324,3185~3186,3205,3207~3 208 protein:T:96~156 989,1062~1063,1093,1095,1097~1 098 protein:U:9~112 1676~1680,1682,1686~1688,1757~ 1758 protein:V:2~137 1897~1899,1901,2338~2339,2916~ 2917,2931~2932,3039,3041~3043, 3051,3092,3095 protein:W:3~234 1208~1210,1221~1222,1229~1232, 1258~1260,1269,1272~1274,1278~ 1279,1282~1283,1289~1290,3115, 3117 protein:X:23~142 13~14,16~18,129,1521~1524,1558 ~1559,1580,1609~1610,1829~1832 ,2523,2585 protein:Y:2~127 190,200,213,215~218,225~226,22 9,335~336,378 protein:y:2~243 3018~3019 protein:Z:2~136 1629~1630,1632~1637,1709~1711, 1807~1808,1812,2555,2562~2563 protein:z:2~56 2892,3012~3013,3015,3037,3099~ 3100,3129~3130 protein:K:10~163 1234~1236,1239~1240,1254~1256 protein:q:2~98 44,91~93,277~279,283~284,758,2 225~2226,2421~2422,2652~2656,2 713~2714,2716~2717,2741~2742,2 761,2766~2769,2786,2791~2793,2 795~2797,2802~2803 protein:o:6~59 747~750,776,951~955,968~970,98 4,1065,1073~1076,1085,1087,113 8~1139,2737 rna:2:1~121 996~999,1052,1054~1055,1171,11 97,1203 rna:3:1~158 3~23,59,143,330~337,339~341,34 5~346,349,351,368~369,404~419, 656~657,691,1394~1395,1399,141 9,1441,1530,1618,1620,1830~183 1,2386,2585,2994~2995 |
|
| 2248 |
6n8j:2 (3.5Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:D:8~277 1,5~8,10~11,13,22,26~27,33~34, 36,44~50,61~62,66~67,112,115~1 16,118,120~121 protein:J:7~171 5,17,27~29,39~40,42~44,55~57 protein:F:23~244 84~87,96~99 protein:S:2~171 73,76~77,87,96~98,100~101 rna:1:3~3396 79~81,86,90,100,102~104 |
|
| 2249 |
6n8j:3 (3.5Å) |
158 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:b:1~647 50,75 protein:C:2~362 21~22 protein:G:24~253 149~155 protein:h:2~120 36~38,49~50,60~61,63~66,78,86~ 87,97 protein:j:2~86 33~36,41~43,57~58,67,94~95,111 protein:l:2~51 45~46,51~53,75,112~113 protein:N:2~204 140~143 protein:P:2~184 3~5,11~14 protein:X:23~142 60,99~100,131~137,147,151 protein:Y:2~127 22~24,70~75,84~85,87,91 rna:1:3~3396 1~22,24~37,40~41,53~54,104,114 ~115,125,129,138,140~157 |
|
| 2250 |
6n8k:1 (3.6Å) |
3201 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:s:1~210 2470,2490~2491,2493 protein:v:153~406 1015,1021~1022,1024~1029,1032, 2236~2237,2251,2268~2269,2284, 2308,2418,2620~2623,2871,2873~ 2876,2922~2923,2971~2972 protein:A:2~246 822~825,860,896,905,910~912,91 4,916,925,1579~1580,1650~1651, 1793~1795,1797,2146~2150,2153~ 2155,2157~2158,2162~2164,2173~ 2187,2202~2203,2241~2246,2415, 2424~2425,2522,2524~2526,2548, 2550~2551,2554,2557~2558,2606~ 2607,2961,2964~2965,2967~2968 protein:a:56~149 70,88~89,283,304~305,705,709,7 14~716,771,2777,2786~2788 protein:B:2~387 875,1305,1886~1887,1889,1908,2 338,2340~2341,2366,2392~2395,2 878,2880~2883,2915~2916,2939~2 941,2943~2944,2946~2948,2981,2 987~2992,3000,3002~3004,3009,3 011,3037~3039,3044~3047,3049,3 086~3088,3090,3096~3099,3137~3 140,3146~3150,3241~3244,3295~3 297,3304~3307,3313~3316,3329~3 331,3369~3370,3375,3377~3379 protein:b:1~647 355~356,376,401~402,877,880,88 3~885,1128,1242,1270,1303,1476 ~1477,1503~1505,1517~1519,1680 ~1681,1683,1846,2139~2140,2401 ~2403,2820,2822,2825~2830,2861 ~2863,2870~2872,2874,2887~2888 ,2898~2899,2937,2942,2955,2978 ,3027~3028,3073 protein:C:2~362 208~212,221,329,336~341,343~34 4,346~347,355,357,364~366,505, 514~516,519~520,578~580,594,59 6~597,599,608~610,658,660,664, 673,675,680~681,689,691~696,78 9~791,800,803~805,929,933,1346 ~1348,1350,1361,1380~1386,1419 ~1420,1424~1426,1429,1436,1438 ~1439,2400~2402,2814 protein:c:9~105 1713,1728~1730,2552~2553 protein:d:6~112 1456~1459,1474,1476,1884,3056~ 3059,3074,3076,3323~3325,3373~ 3374,3376,3385~3386 protein:E:2~176 499~503,591,593,607~608,611,61 7,1353~1354,1387,1421~1423,317 6,3215~3216,3219,3266~3274,327 6 protein:e:2~128 424~425,438,634,638~640,655,94 4~947,1144~1147,1160~1162,1338 ~1340,1388~1389,1391~1392,1394 ,1403~1408,1410~1413,1433,2362 protein:F:23~244 508,516~518,520,577~578,595~59 8,984~986,1100~1102,1104,1138~ 1139,1155,1158~1159,1167~1171, 1333~1335,1361~1362,1364 protein:f:2~107 428~433,498,509,583~584,586,62 2,624,630~634,1150~1151,1166~1 167,1177~1178,1180,1326,1329~1 330,3170~3176,3214,3216,3218~3 219,3275,3277~3279 protein:G:24~253 7,10,117,119~121,123,146~148,1 557~1558,2514,2523~2526,2528~2 529,2549~2550,2557,2561~2563,2 580,2584~2588 protein:g:2~113 1481,1483,1485~1486,1488~1489, 1589~1593,1597~1598,1606,1616, 1638~1640,1643,1653~1655,1669, 1694~1696,1707,1739~1740,1785, 1801~1805,1821~1822,1854~1858, 2552~2553,2555 protein:I:1~131 1898~1899,1910~1911,1936~1939, 2112~2113,2334,3054,3083 protein:H:1~188 1211~1212,2894,2898~2899,2901, 3024~3026,3033~3035,3109~3113, 3123~3124,3184,3186~3187,3198~ 3199 protein:h:2~120 17~20,134~136,151~152,254~255 protein:i:3~98 73,155~157,264~266,273,293~295 ,297,309,315~316,2218 protein:j:2~86 23,53,55,347,353,359~364,812~8 13,815~818,884,901,903~904,921 ~922,929,1490,1492,1844~1845,1 851~1852,2138~2139 protein:k:2~78 1613,1699,1746~1748,1750~1751, 1824~1826 protein:L:8~194 48~49,65~66,72~77,86,96~98,102 ~103,107~108,110,156,169,326,6 65,684~687,699~700,712~713,765 ,768~770,797~799,2774 protein:l:2~51 351,1491~1495,1517~1518,1521,1 588,1833~1834,1844 protein:M:2~138 524~525,534,559~562,1184~1185, 3186,3206,3210~3211,3213~3215, 3227,3229,3260~3261 protein:p:2~92 836~837,858,860,1727,1729,1791 ,1793,1795,1927,2131,2188~2190 ,2320 protein:N:2~204 9,19,29~33,35,43~44,49,56~58,6 1~64,66,69,77,80~82,99~100,114 ~116,126,144,148~149,151,266~2 69,276~277,280~282,286~291,294 ,297,302,304,319~322,665,682,9 08~909,1543~1547,2166~2167,242 2,2424~2425,2433,2435,2515~251 6,2598~2600,2609 protein:u:1~149 2111,3050~3052,3084~3085,3332~ 3334,3366~3367,3369 protein:O:3~199 632,1174~1176,1181,1189~1191,1 193,1306~1307,1312~1316,1318,2 365,2382~2383,2988,3006~3008,3 132~3133,3173,3178,3180~3185,3 190,3243~3244 protein:P:2~184 382,388~389,398,402,412~413,61 7,619~620,1443,1446~1448,1505, 1507~1508,1846~1847,2350~2357, 2389,2991,3270,3274,3277,3298~ 3299,3308~3310,3392 protein:Q:4~157 670~673,676~677,720,728~730,74 1~746,784~787,949~950,974~977, 1103,1109,1341~1343,1347~1348, 1364 protein:R:2~155 832~833,854~856,1471~1474,1498 ,1513,1600~1602,1671~1672,1690 ,1718~1724,1764~1765,1779,1864 ,1871,1873~1875,1914,1916~1917 ,1938~1940,1942,1947~1949,2093 ,2103~2104,2115,3067~3070 protein:S:2~171 519,523,534,562~563,1182,1186, 1212~1214,1294~1296,1321~1322, 1324,3185~3186,3206~3209 protein:T:96~156 1062~1063,1092~1093,1095~1098 protein:U:9~112 1675~1680,1682~1683,1686~1688, 1757~1758 protein:V:2~137 1897~1899,1901,2295,2338~2339, 2917,2931~2932,3039~3041,3043, 3051,3092,3094~3095 protein:W:10~234 1221,1229~1232,1257~1262,1269, 1272,1274~1275,1278~1282 protein:X:23~142 13~14,16~18,1520~1524,1558,156 0,1580,1608~1610,1829~1832,252 3 protein:Y:2~127 190,200,213,215~218,224~226,22 9,335~336,378 protein:y:2~243 3018~3019 protein:Z:2~136 1629~1632,1634~1637,1709~1711, 1807,1812,2555,2562~2563,2573 protein:z:2~56 2891~2892,3012~3013,3015,3037, 3099~3100,3129~3130 protein:D:8~285 1078~1080,2663,2688~2689,2703, 2705,2746~2749 protein:J:10~173 2671~2675,2677,2679~2684 protein:q:2~98 34,44~46,90~92,278~280,282~286 ,306,758~759,2655,2717,2761,27 66~2772,2785~2786,2791~2795,28 02~2803 protein:o:6~59 747~750,776,951,953~954,968~97 0,1065,1073~1076,1085,1087,113 5~1136,1138,2737 rna:2:1~121 996~999,1052,1054~1055,1171,11 97,1203 rna:3:1~157 3~23,59,143,330~337,339~341,34 5~346,349,351,368~369,404~419, 656~657,691,1394~1395,1399,141 9~1420,1441,1530,1583,1618,183 0~1831,2386,2585,2994~2995 |
|
| 2251 |
6n8k:2 (3.6Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:F:23~244 85~87,96~99 protein:S:2~171 76~77,87,96~98,100 protein:D:8~285 1,5~8,10~11,14~15,26~27,31,33~ 35,46~51,61~63,66~68,112,115~1 16,118~119,121 protein:J:10~173 6,17,27~28,39~40,42~44,57 rna:1:3~3396 79~81,86,90,102~104 |
|
| 2252 |
6n8k:3 (3.6Å) |
157 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:C:2~362 21,27 protein:G:24~253 149~152,156 protein:h:2~120 36~38,49~50,60~61,63~66,86~87, 97 protein:j:2~86 33~34,36,41~43,57~58,67,94~95, 111 protein:L:8~194 29~31 protein:l:2~51 45~46,52~53,75 protein:N:2~204 141~143 protein:P:2~184 3~5,11~14 protein:X:23~142 60,100,131~136,147,150~151 protein:Y:2~127 23~24,70~75,83~85,87,91 rna:1:3~3396 1~22,24~37,40~41,104,106,109,1 12,114~115,137~152,154~157 |
|
| 2253 |
6n8l:1 (3.6Å) |
3201 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:v:17~402 1021~1022,1025~1028,2235~2236, 2251,2268~2269,2284,2418,2620~ 2624,2829~2830,2849~2850,2876~ 2877,2922~2924,2971~2972 protein:s:1~210 2465~2468,2470,2490~2491,2493 protein:A:2~246 821~825,860,896,905,910~914,91 6,925,1579~1580,1650,1793~1795 ,2146~2150,2153~2155,2157~2158 ,2162~2163,2173~2181,2183~2186 ,2202~2203,2240~2246,2415,2424 ~2425,2522,2524~2526,2548,2550 ~2551,2553~2554,2557~2558,2605 ~2608,2961,2965~2968 protein:a:56~149 70~71,88~90,101,283,304~305,70 5,709,714~716,771,785,2777,278 7~2788 protein:B:2~387 875~876,1305,1886~1889,1908,23 37~2338,2341,2366,2374,2391~23 95,2878,2880~2883,2915~2916,29 38~2941,2943~2944,2946~2948,29 81,2987~2992,3000~3004,3009~30 11,3037~3039,3044~3047,3049,30 86~3088,3090,3096~3098,3136~31 40,3146~3150,3241~3244,3295~32 97,3304~3307,3313~3316,3321,33 29~3330,3369,3375,3377~3379 protein:b:361~647 355~356,377,401~402,877,883~88 5,1475~1477,1503~1505,1517~151 9,1680~1681,1683,1846,2139~214 0,2400~2404,2955,2978,3072~307 3 protein:C:2~362 208~212,336~341,343~344,346~34 7,355~357,364~366,505,514~515, 519~520,578~579,590,594~597,59 9,608~610,658,660,662,664,673~ 675,680~681,689,691~696,789~79 0,800,803~805,929,933,1346~134 8,1350,1361,1381~1386,1388,141 9~1420,1424~1425,1427,1429,143 6,1438~1439,2400~2402,2814 protein:c:9~105 1712~1713,1728~1730,2552~2553 protein:d:6~112 1456~1460,1474~1476,1884,2345, 3056,3058~3059,3076,3323~3325, 3373~3374,3376,3384~3386 protein:E:2~176 499,501~503,591,593,606~608,61 1,617,1353~1354,1385,1422~1423 ,3176,3215~3216,3267~3273 protein:e:2~128 424~425,438,634~635,638~640,64 5,655,944~947,1145~1147,1160~1 162,1338~1340,1366,1368,1386~1 392,1394,1403~1408,1410~1412,1 433,2362 protein:F:23~244 507~508,517~518,520,577~578,59 5~597,984~986,1057,1100~1101,1 138~1139,1155~1159,1167~1171,1 333~1334,1361~1364 protein:f:2~107 428~433,498~499,509,583~584,58 6,622,624,630~633,1150,1166~11 67,1177~1180,1326~1330,3170,31 73~3176,3218~3219,3275,3277~32 79 protein:G:24~253 7,117,119~121,123,144~148,1557 ~1558,2514,2523~2526,2528~2529 ,2549~2550,2561~2563,2580,2584 ~2588 protein:g:2~113 827,1481,1483,1485~1487,1489,1 589~1594,1597~1598,1606,1616,1 638~1640,1643,1653~1655,1668~1 669,1694~1696,1708,1738~1740,1 802~1805,1821,1835,1854~1858,2 552~2553,2555 protein:I:1~131 1896~1897,1910~1911,1936~1937, 1939,2112~2113,3054,3083 protein:H:1~188 1211~1212,2894,2899,2901,3024~ 3026,3032,3034~3035,3108~3114, 3122~3123,3126,3184,3186~3187, 3198 protein:h:2~120 18~20,112,135~136,152 protein:i:3~98 73,155~157,264,266,271~273,293 ~297,309,315~316,2218 protein:j:2~86 23,53,55,347,353,359~364,812~8 18,884,901,903,921~922,929~930 ,1490,1492,1548,1844~1845,1851 ~1852,2138~2139 protein:k:2~78 1613,1699,1746~1748,1750~1751, 1824~1826 protein:L:8~194 48~49,66,72~77,86,96~98,102~10 4,106~108,110,156,326,665,682~ 687,691,699~700,712~713,765,76 8~770,797~799,2780 protein:l:2~51 351,402,1491~1495,1514,1517~15 18,1588,1833~1834,1844 protein:M:2~138 524~525,534,559~562,1185~1186, 3186,3199,3206,3210~3211,3213~ 3215,3227,3229,3260~3261 protein:p:2~92 836~837,850,852,856,860,1727~1 729,1791~1793,1795,1925~1927,2 131,2188~2190 protein:N:2~204 19,29~35,43~44,49,56~57,62~64, 66,69,77,80~82,99~100,113~116, 126,144,147~149,151,266~269,27 6~277,280~282,286~291,294,297, 302~304,319~321,665,908~909,15 43~1547,2166~2167,2422,2424~24 25,2433,2435,2515~2516,2599~26 00,2609 protein:u:1~149 2111,3050~3053,3085,3332~3333, 3366~3367,3369 protein:O:3~199 632,1174~1176,1181,1189~1191,1 193,1306~1307,1312~1316,1318,2 365,2382~2384,2988,3006~3008,3 123~3124,3132~3133,3172~3173,3 178,3180~3185,3190,3192,3243~3 244 protein:P:2~184 382,388~389,398,402,412~413,61 7~620,879~880,883,1442,1446~14 48,1505,1507~1508,1846~1847,23 51~2357,2389,2991,3217,3270,32 74,3276~3277,3298~3299,3308~33 10,3392 protein:Q:4~157 670~673,676~677,720,727~730,74 1~743,745~746,784~787,949~950, 974~977,1103,1109,1342~1343,13 47~1348,1355,1364 protein:R:2~155 832~833,854~855,1471~1473,1498 ,1513,1600~1603,1671~1672,1716 ,1718~1724,1764~1765,1779,1864 ,1871~1875,1914~1917,1938~1940 ,1942,1947~1949,2093,2103,2115 ,3067~3069 protein:S:2~171 519,522~523,534,562~563,1183,1 186,1212~1214,1294~1295,1320~1 324,3185~3186,3206~3208 protein:T:96~156 990,1062~1063,1093,1095~1098 protein:U:9~112 1676~1680,1682~1683,1686~1688, 1757~1758 protein:V:2~137 1896~1899,1901,2295,2338~2339, 2917,2931~2932,3041~3043,3051, 3092 protein:W:19~234 1219,1221~1222,1229~1232,1257~ 1260,1281~1282 protein:X:23~142 14,16~18,129,1521~1524,1558~15 59,1580,1608~1610,1829~1832,25 23 protein:Y:2~127 186,190,200,213,215~218,224~22 6,228~229,335~336,378 protein:y:2~226 3018~3019 protein:Z:2~136 1629~1630,1633~1638,1710~1711, 1807~1809,2555~2556,2562~2563, 2572~2573 protein:z:2~56 2892,3013,3015,3037,3099~3100, 3129~3131 protein:D:8~285 1003,1079~1080,2663,2688~2689, 2703,2746~2749 protein:J:10~173 2664,2671,2673~2675,2677,2679~ 2684 protein:q:2~98 34,44~46,90~92,278~280,282~286 ,306,758~759,2652,2655,2717,27 61,2766~2772,2785,2791~2795,28 02~2803 protein:o:6~59 747~750,776,952~954,968~970,98 4,1065,1073~1076,1085,1087,113 5~1136,1139,2641,2737~2738 rna:2:1~121 996~999,1052,1054~1055,1156,11 71,1197,1203 rna:3:1~157 3~23,59,143,330~337,339~342,34 5~346,349,351,368~369,404~419, 656~657,691,1394~1395,1399,141 9,1441,1530,1618,1830~1832,238 6,2585,2994~2995 |
|
| 2254 |
6n8l:2 (3.6Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:F:23~244 85~87,96~99 protein:S:2~171 76~77,87~88,95~101 protein:D:8~285 1,5~8,10~11,13~15,22,26~27,31, 33,35,45~51,62~63,66~68,112,11 6,118~119,121 protein:J:10~173 6,17~18,27~29,39~40,42~44,55~5 7 rna:1:3~3396 79~81,86,90,100,102~104 |
|
| 2255 |
6n8l:3 (3.6Å) |
157 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 protein:b:361~647 50,75 protein:G:24~253 149~155 protein:h:2~120 36~38,48~49,63~66,86~87,97 protein:j:2~86 33~36,41~43,57~58,67,94~95,104 ,111 protein:L:8~194 29~30 protein:l:2~51 45~46,52~53,75,112~113 protein:N:2~204 141~143 protein:P:2~184 5,11~14 protein:X:23~142 59~60,99~100,131,133~136,147,1 50~151 protein:Y:2~127 23~25,70~75,84~85,87,91 rna:1:3~3396 1,3~22,24~37,40~41,53~54,104,1 09,112~115,126,136,138~152,154 ~157 |
|
| 2256 |
6n8m:A (3.5Å) |
3203 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:B:1~121 996~998,1052,1054~1055,1171,11 97,1203 rna:C:1~158 3~13,15~23,59,330~337,339~341, 345~346,349,351,368~369,404~41 9,656,691,1394~1395,1398~1399, 1419,1530,1584,1618~1620,1830~ 1832,2386,2585,2994~2995 protein:Y:225~352 1242,1270,2842~2844,2898,3024, 3026~3028 protein:D:2~247 821~824,860,896,910~914,916,16 50~1651,1793~1795,1797,2146~21 50,2152~2155,2157~2158,2162~21 64,2171,2173~2181,2183~2187,22 01~2203,2241~2245,2415,2424,25 22,2524~2526,2550~2551,2553~25 55,2557~2558,2607,2959~2961,29 65~2969 protein:E:2~385 874,878,1305,1886~1889,1907~19 08,2340~2341,2366,2392~2395,28 79~2883,2915~2916,2925,2939~29 44,2946~2950,2987~2991,3000~30 05,3009~3011,3038~3039,3044~30 49,3086~3087,3089~3090,3097~30 99,3136~3140,3146~3151,3242~32 44,3292~3297,3304~3307,3313~33 16,3320~3321,3329~3331,3369~33 71,3375,3377~3378 protein:F:2~362 209~212,329,336~341,343,346~34 7,355,357,364,505~506,514~516, 520,578~579,590,594,596~598,60 8~610,658,660,662,664,673~675, 681,689,691~696,789~790,800,80 2~805,929,933,1346~1350,1379~1 386,1388,1419~1420,1424~1425,1 427,1429,1435~1439,2401~2402,2 813 protein:G:7~288 1003,1078~1080,1084,2663,2687~ 2688,2703,2705,2746~2749 protein:H:2~176 499~503,591~593,607~609,611,13 53~1354,1385,1422,3176,3214~32 16,3219,3265,3267~3268,3270~32 74,3276 protein:I:25~244 507~508,517~520,576~578,595~59 8,985~987,1057,1100~1103,1139, 1155,1157~1159,1167~1171,1332~ 1334,1343,1361~1363 protein:J:24~250 117,119~121,123,145~148,1557~1 558,1578,2513~2514,2523~2527,2 549~2550,2561~2563,2580,2584~2 586,2588 protein:K:1~188 1211~1212,2894,2898~2900,3020, 3024,3026,3032~3035,3108~3115, 3122~3123,3126,3184~3187,3198 protein:M:6~173 2664,2671~2677,2680~2684 protein:N:2~194 48~49,65~66,72~77,86,96~98,102 ~103,106~108,110,156~157,326,6 65~666,683~687,699~700,712~713 ,765,767,769~770,796~799,965,1 112,2774,2780 protein:O:3~138 524~525,534,559~562,1184~1185, 3186,3199,3204,3206,3208,3210~ 3211,3213~3215,3227,3229,3260 protein:Q:2~103 44,91~92,277~279,284,758,2225~ 2227,2421~2422,2652~2656,2708, 2713~2717,2741,2761,2766~2769, 2786,2791,2795~2797,2802 protein:R:2~89 836~837,850,852,858,860,1725,1 791~1793,1795,1925~1927,2131~2 132,2188~2190,2320 protein:S:1~210 2466,2469~2470,2490,2493 protein:a:2~204 18,20,28~32,34~36,44~45,49,56~ 57,61~64,66,69,77,81~82,99,113 ~115,117,126,144,147~150,265~2 69,277,280,282,286~292,294,297 ,304,319~322,665,682,810,908,1 543~1547,2165~2166,2424~2425,2 433,2435,2515~2516,2599,2609 protein:b:3~199 632,1174~1176,1181,1189~1191,1 193,1306~1307,1312~1316,1318,2 365,2382~2383,2987~2988,3005~3 008,3124,3133,3135,3172~3173,3 178,3180~3183,3185,3190,3242~3 244 protein:c:2~184 388~389,398,402,412~413,618,87 9~880,883,1442~1443,1446~1448, 1506~1508,1846~1847,2350~2357, 2389,2991,3217,3270~3271,3274, 3276~3277,3298~3299,3308~3309, 3392 protein:d:2~186 87,89,668,670~673,676~677,709, 727~730,741~746,780,784~787,94 8~949,971~972,974~977,1103,110 9~1110,1159~1160,1341,1343,134 7~1349,1364,2730,2763~2764,278 9~2790 protein:e:2~152 832~833,840,855~856,1471~1473, 1498,1513,1600,1602~1603,1663~ 1664,1671~1672,1689~1690,1716, 1718~1724,1764~1765,1779,1864, 1871~1875,1914~1916,1938~1940, 1942,1947~1949,2103~2104,2115, 3067~3070 protein:f:3~172 519,534,562~563,1186~1187,1212 ~1214,1293~1295,1320~1322,3185 ~3187,3205,3207~3208 protein:g:2~160 968~969,989,992,994,1050~1051, 1060,1062~1063,1092~1093,1095~ 1098,2626,2630~2632,2635,2639~ 2641,2643,2698,2700~2701,2705, 2722~2724,2728,2735~2737,2756 protein:h:11~107 1676~1678,1680,1682~1683,1686~ 1688 protein:i:6~137 1896~1898,1901,2295,2338~2339, 2880,2916~2917,2930~2932,3040~ 3043,3051,3092~3093,3095 protein:j:1~61 2110~2111,3051,3083~3085,3332~ 3333,3369 protein:k:22~142 15~17,1521~1524,1558~1559,1580 ,1609,1829~1833,2523,2585 protein:l:2~126 190,200,213,215~218,221,224~22 6,228~229,335~336,375,378 protein:m:2~136 1629~1630,1633~1639,1711,1807~ 1809,2555,2562~2563,2572~2573 protein:n:2~149 38~40,70~71,88~90,96,283,304,6 40~641,661,705,709~710,714~716 ,782,785,792~794,797~798,801,9 36~939,942~944,958,964~966,111 4,1369~1373,1426~1428,1430~143 1,2727,2765,2777,2787~2788,279 9~2800 protein:o:2~59 723,746~750,776,951~954,968~97 0,984,1065,1073~1076,1085,1087 ,1106~1107,1117,1135~1136,1138 ~1139,2618,2722,2737 protein:p:9~104 1712,1715,1728~1730,2552~2553 protein:q:4~110 1455~1456,1458~1460,1474,1476, 1883,2345,3056,3058~3059,3074, 3076,3323~3325,3374,3376,3384~ 3386 protein:r:2~127 424~425,437,496,634,638~640,64 5,655,944~947,1145~1146,1161~1 162,1338~1340,1368,1386,1388~1 389,1392,1403~1408,1410~1413,1 433,2362 protein:s:2~107 428~432,497~500,584~585,622,63 1~634,1150~1151,1166~1167,1177 ~1180,1326~1329,3170~3171,3173 ~3176,3218~3219,3275,3277,3279 protein:t:2~110 1481,1483,1485~1486,1488~1489, 1589~1593,1597~1598,1606,1616, 1638~1640,1643,1652~1655,1668~ 1669,1694~1696,1707~1709,1738, 1740,1802~1805,1821,1854~1858, 2553,2555 protein:u:2~120 17~18,20,112,128,134~136,151~1 52 protein:v:3~100 73,116,155~157,264~266,271~273 ,293~295,297,308~309,315~316,2 218 protein:w:2~85 23,53,55,181,347,353,359~364,8 13~819,884,901,903,921,929,149 0~1492,1844~1845,1851~1852,213 8~2139 protein:x:2~78 1612~1613,1746~1748,1750~1751, 1825~1826 protein:y:2~51 351,354~355,402,1491~1495,1518 ,1521,1588,1833~1834,1843,1848 protein:z:77~127 1191~1192,1207~1208,1269,1299, 2847~2848,2895~2897,2908,3107~ 3108,3120~3121 protein:V:10~402 1020~1022,1025~1026,1028,2236~ 2237,2268~2269,2284,2418,2620~ 2624,2794,2828~2831,2849,2851, 2863,2876,2922~2924,2971 protein:L:10~163 1234~1237,1239,1254~1255 protein:X:1~237 3018~3019 |
|
| 2257 |
6n8m:B (3.5Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:A:3~3396 79~81,86,90,100,102~103 protein:G:7~288 1,5~11,13~14,22,26~27,31,33,35 ~36,44~50,61~64,67,109,112,116 ~121 protein:I:25~244 85~87,96~99 protein:M:6~173 6,17,28~29,39~40,42~44,52,55~5 7 protein:f:3~172 76~77,87~88,95~99,101 protein:g:2~160 9,69 |
|
| 2258 |
6n8m:C (3.5Å) |
158 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:A:3~3396 1~22,24~33,35~37,40,53~54,104, 109,113~115,125~126,129,138~15 7 protein:F:2~362 21,28 protein:J:24~250 149~152,155 protein:a:2~204 140~143 protein:c:2~184 3,5,11~14 protein:k:22~142 60,100,131~136,147,151 protein:l:2~126 23~24,70~75,83~85,87,91 protein:u:2~120 36~38,49,60,63~66,86~87,97 protein:w:2~85 33~36,41~43,57~58,67,94~95,104 ,111 protein:y:2~51 45~46,51~53,75,113 |
|
| 2259 |
6n8n:A (3.8Å) |
3203 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:B:1~121 996~998,1052,1054~1055,1171,11 97,1203 rna:C:1~158 3~23,59,330~337,339~342,345~34 6,349,351,368~369,404~408,410~ 419,656,691,1394,1398~1399,141 9~1420,1441,1530,1584,1618~161 9,1830~1832,2386,2585,2994~299 5 protein:Y:225~352 1242,1270,2843~2844,2898,3023~ 3024,3026~3029 protein:X:1~237 3018~3019 protein:W:117~524 2125~2126,2255~2262,2275~2276, 2290~2294,2297,2303,2306,2330 protein:V:9~401 1022,1025~1026,2268~2269,2284, 2290~2291,2418,2620~2624,2794, 2820,2863,2876,2922,2971 protein:D:2~247 822~825,860,896,905,910~914,91 6,1650,1793~1795,2146~2150,215 2~2155,2157~2158,2162~2164,217 2~2181,2183~2187,2201~2203,224 1~2246,2415,2424,2522,2524~252 6,2550~2551,2553,2555,2557~255 8,2605~2608,2959~2961,2965~296 9 protein:E:2~385 874,1305,1886~1889,1908,2338,2 340~2341,2366,2392~2394,2880~2 882,2915~2916,2939~2941,2943~2 944,2946~2948,2950,2987~2992,3 001~3004,3009~3011,3037~3038,3 044~3049,3086~3088,3090,3097,3 099,3136~3140,3146~3151,3242~3 244,3293~3297,3304~3307,3313~3 315,3319,3329~3331,3369,3377~3 378,3380 protein:F:2~362 208~212,329,336~341,343~344,34 6~347,355~357,364,366,505~506, 514~516,520,578,594~597,608~61 0,658,660,662,664,673~675,681, 689,691,693~696,789~790,800,80 3~805,929,933,1346~1348,1361,1 379~1380,1382~1386,1388,1419~1 420,1424~1427,1429,1435~1439,2 401~2402,2813 protein:G:7~289 1003,1077~1080,1084,2663,2687~ 2688,2703,2705,2746~2749 protein:H:2~176 500~503,591~593,607~608,611,13 53~1354,1385,1422,3176,3214~32 16,3265,3267~3273,3276 protein:I:25~244 507~508,517~518,520,576~578,59 5~598,985~987,1057,1100~1103,1 138~1139,1155~1159,1167~1171,1 333~1334,1361~1363 protein:J:24~250 117,119~121,123,145~148,1557~1 558,1578,2513~2514,2523~2526,2 549~2550,2557,2561~2563,2580,2 584~2586,2588 protein:K:1~188 1210~1211,2894,2898~2901,3024, 3026,3032~3034,3108~3114,3122~ 3123,3126,3186~3187,3198 protein:M:6~173 2664,2671~2677,2679~2684 protein:N:2~194 48,66,72~77,86,96~98,102~103,1 06~108,110,156~157,169,326,665 ,683,685~687,699~700,712~713,7 67~770,797~799,932,1112,2774 protein:O:3~138 524~525,534,559~561,1184~1185, 3186,3199,3205~3206,3210~3211, 3213~3215,3227~3229,3260~3261 protein:Q:2~103 44,91~92,278,284,758~759,2225, 2227,2422,2652~2656,2708,2713, 2715~2716,2741,2754,2761,2766~ 2770,2786,2791~2792,2795~2797, 2802 protein:R:2~89 836~838,850,856,858,860,1727,1 791~1793,1795,1925~1927,2131~2 132,2188~2190,2320 protein:S:1~210 2466,2490~2491 protein:a:2~204 9,18~19,28~32,34~36,44~45,49,5 6~58,61~63,66,68~69,77,80~82,9 9,113~115,117,126,144,148~151, 266~269,277,280,286~292,294,29 7,319~321,665,682,908~909,1543 ~1547,2165~2167,2422,2424~2425 ,2433~2435,2515~2516,2597,2599 ,2609~2610 protein:b:3~199 632,1174~1176,1181,1189,1191,1 193,1306~1307,1312~1316,1318,2 365,2382~2383,2988,3006~3008,3 104,3123,3133,3135,3172~3173,3 178,3180~3184,3190,3192,3242~3 244 protein:c:2~184 382,388~389,398,402,412~413,61 7~618,879~880,883,1446~1448,15 06~1508,1846~1847,2350~2357,23 89,2991,3217,3270,3274,3276~32 77,3298~3299,3308~3310,3392 protein:d:2~186 87~89,668,671~673,676~677,709, 728~730,741~746,780,784~787,94 9,971,973~977,1109,1159,1333,1 341,1343,1347~1348,1364,2730,2 763~2764,2788,2790 protein:e:2~152 833,840,855,1471~1473,1513,160 0~1603,1663~1664,1671~1672,169 0,1716,1718~1724,1765,1779,186 4,1871,1873~1875,1914~1917,193 8,1940,1942,1948~1949,2093,210 3,2115,3067~3070 protein:f:3~172 519,521~523,534,536,563,1186,1 212~1214,1293~1295,1321~1322,3 185~3187,3205~3209 protein:g:2~160 989,992,994,1050,1059~1060,106 3,1092~1093,1095~1098,2626,263 0~2632,2640~2642,2698~2701,272 2~2724,2728,2735~2737,2751,275 6 protein:h:11~107 1675~1680,1682~1683,1686~1688, 1757 protein:i:6~137 1896,1898,1901,2294~2295,2338, 2880,2917,2931~2932,3040~3043, 3051,3092~3095 protein:j:1~61 2110~2111,3050~3051,3083~3085, 3332~3333,3366,3369 protein:k:22~142 16~18,1521~1524,1558~1559,1580 ,1609,1829~1832,2523,2585 protein:l:2~126 190,200,213,216~218,225~226,22 9,335~336,375 protein:m:2~136 1629~1630,1633~1634,1636~1639, 1711,1807~1809,2555~2556,2562~ 2563,2565,2572 protein:n:2~149 38~40,70~71,88~90,95~96,283,30 4,640~641,661~662,705,714~716, 782,785,792~794,797~798,801~80 2,936~939,942~944,952,957~958, 964~965,1114,1369~1370,1372~13 73,1426~1428,1430~1431,2727,27 63,2765,2775,2777,2787~2788,27 99~2800 protein:o:2~59 723,748~750,776,952~954,968~97 0,984,1065,1073~1076,1085,1087 ,1106~1107,1118,1135~1136,1139 ,2618,2722,2737 protein:p:9~104 1728~1730,2552~2553 protein:q:4~110 1456~1460,1474,1476,1883,3056, 3058~3059,3076,3323~3325,3373~ 3374,3376,3384~3386 protein:r:2~127 408,424~425,437,496,626,634,63 8~640,655,944~947,1144~1147,11 60~1162,1338~1340,1368,1388~13 89,1391~1392,1403~1408,1410~14 13,1433 protein:s:2~107 428~433,497~499,509,584,622,62 4,631~634,1150,1166~1167,1177~ 1180,1326~1327,1329~1330,3170~ 3176,3218~3219,3275,3277,3279 protein:t:2~110 1481,1485~1486,1488,1589~1595, 1597~1598,1606,1616,1638~1640, 1643,1652~1655,1669,1694~1695, 1708~1709,1738~1740,1802~1806, 1821,1854~1855,1857~1859,2553~ 2555 protein:u:2~120 17~20,112,135~136,151~152,254~ 255 protein:v:3~100 72~73,155~157,264~266,272,293~ 295,297~298,315~316,2218,2224 protein:w:2~85 23,53,55,182,347,353,359~364,8 12~818,884,901,921~922,929,149 0~1492,1844,1852,2138~2139 protein:x:2~78 1613,1699,1746~1748,1750~1751, 1824~1826 protein:y:2~51 351,354~355,402,1491~1495,1517 ~1518,1521,1588,1833~1834,1843 ~1844 protein:z:77~127 1191,1206~1208,1269,2847~2848, 2895~2897,2908,3107~3108,3119~ 3121 protein:L:10~163 1234~1239,1254~1255 |
|
| 2260 |
6n8n:B (3.8Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:A:3~3396 79~81,86,90,100,102~103 protein:G:7~289 1,5~8,10~11,13~14,22,27,31,33~ 34,36,44~50,61~64,66,109~110,1 12,116,118~121 protein:I:25~244 86~87,96~99 protein:M:6~173 6,17,28~29,39~40,42~44,55~57 protein:f:3~172 76~77,87~88,95~98,100~101 protein:g:2~160 9~10 |
|
| 2261 |
6n8n:C (3.8Å) |
158 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:A:3~3396 1,3~22,24~33,35~37,40~41,53~54 ,104,106,109,113~115,126,138~1 57 protein:F:2~362 21,27~28 protein:J:24~250 149~152,154~155 protein:N:2~194 29~30 protein:a:2~204 141~144 protein:c:2~184 3,5,11~13 protein:k:22~142 59~60,99~100,131~136,147,151 protein:l:2~126 22~24,70~75,83~85,91 protein:u:2~120 35~38,49~50,60,63~66,86~87,97 protein:w:2~85 34,36,41~43,57~58,67,94~95,111 protein:y:2~51 45~46,51~53,75,113 |
|
| 2262 |
6n8o:A (3.5Å) |
3201 | GO:0003735 (F) structural constituent ... GO:0006413 (P) translational initiation GO:0006414 (P) translational elongation GO:0006450 (P) regulation of translati... GO:0006457 (P) protein folding GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000061F377 | RF02543 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:B:1~121 996~998,1052,1054~1055,1171,11 97,1203 rna:C:1~158 3~23,59,330~337,339~342,345~34 6,349,351,368~369,404~419,656, 691,1394~1395,1399,1419,1530,1 584,1618~1619,1830~1831,2386,2 585,2994~2995 protein:Y:225~352 1242,1270,2842~2844,2898,3023~ 3024,3026~3028 protein:X:1~237 3018~3019 protein:L:10~163 1234~1236,1239,1254~1256 protein:W:117~524 1922,2125~2126,2256~2262,2275, 2290~2294,2297,2299,2302~2303, 2306,2329~2330 protein:V:9~401 2210,2236,2268~2269,2284,2290, 2308,2418,2620~2624,2794,2820, 2863,2876~2877,2922,2924,2971 protein:D:2~247 821~825,860,896,905,910~914,91 6,1650,1793~1795,2146~2149,215 3~2155,2157~2158,2162~2164,217 3~2181,2183~2186,2201~2203,224 1~2245,2415,2424,2522,2524~252 6,2550~2551,2553,2557~2558,260 6~2607,2959,2961,2965~2969 protein:E:2~385 1305,1886~1889,1907,2340~2341, 2366,2392~2395,2879~2883,2915~ 2916,2938~2941,2943~2944,2946~ 2950,2987~2992,3000~3005,3009~ 3011,3037~3039,3044~3049,3086~ 3088,3090,3096~3099,3136~3140, 3146~3151,3242~3244,3292~3297, 3304~3306,3313~3316,3329~3331, 3369~3371,3377~3379 protein:F:2~362 208~212,329,336~341,343,346~34 7,355~356,364,366,505~506,514~ 516,520,578,594,596~599,608~61 0,658,660,663~664,673~675,681, 689,691,693~696,789~791,800,80 3~805,929~930,933,1346~1348,13 60,1379~1386,1388,1419~1420,14 24~1427,1429,1436,1438~1439,24 01~2402,2813 protein:G:7~295 1003,1078~1080,2663,2687~2688, 2703,2746~2749 protein:H:2~176 499,501~503,591~593,595,607~60 9,611,1353~1354,1385,1422,3176 ,3214~3216,3219,3265,3267~3273 protein:I:25~244 508,517~518,520,576~578,595~59 8,984~987,1057,1100~1101,1103, 1138~1139,1156~1159,1167~1171, 1333~1334,1361~1364 protein:J:24~250 117,119~121,123,146~148,1556~1 558,2513~2514,2523~2526,2549~2 550,2561~2563,2580,2584~2586 protein:K:1~188 1209,2894,2898~2899,2901,3020, 3026,3032,3034~3035,3108~3114, 3122~3124,3126,3185~3187,3198 protein:Z:3~218 1008~1011,1040,1043~1044,1047~ 1048,1125~1129,2635,2645~2648, 2828,2836,2852~2854 protein:M:6~173 1028,2672~2675,2677,2680~2684, 2703 protein:N:2~194 48~49,66,72~77,86,96~98,102~10 3,106~108,110,156~157,326,665~ 666,683~687,699~700,712~713,76 5,767~770,796~799,966,2774,278 1 protein:O:3~138 524~525,534,560~562,1184~1185, 3186,3199,3206,3208~3211,3213~ 3215,3227,3229,3260~3261 protein:Q:2~103 44,91~92,278,284,758~759,2225, 2227,2421,2652~2656,2713~2717, 2741,2754,2761,2766~2770,2785~ 2786,2791,2795~2797,2802 protein:R:2~89 836~837,850,852,856,858,860,17 27,1729,1791~1793,1795,1925~19 27,2131,2188~2190 protein:S:1~210 2466,2469~2470,2490~2491,2493 protein:a:2~204 19,28~32,34~36,44~45,49,56~58, 61~64,66,69,80~82,99,113~115,1 17,126,144,147~151,266~269,277 ,280,282,286~292,294,297,304,3 19~321,665,682,692,810,908,154 3~1547,2165~2167,2424~2425,243 3~2435,2515~2516,2599~2600,260 9 protein:b:3~199 632,1174~1176,1181,1189~1191,1 193,1306~1307,1312~1316,1318,2 365,2382~2383,2988,3006~3008,3 123,3132~3133,3172~3173,3178,3 180~3183,3185,3190,3192,3242~3 244 protein:c:2~184 388~389,398,402,412~413,618,87 9~880,883,1446~1448,1504,1506~ 1508,1847,2351~2357,2389,2991, 3217,3270~3271,3274,3276~3277, 3298,3308~3310,3392 protein:d:2~186 87~89,668,670~673,676~677,709, 729~730,741~746,780,784~787,94 9,971~972,974~977,1103,1109,11 59~1160,1341,1343,1347~1348,13 64~1365,2730,2763,2788~2790 protein:e:2~152 832~833,840,855~856,1471~1473, 1498,1513,1600~1602,1663,1671~ 1672,1689,1716,1718~1724,1765, 1779,1864,1871,1873~1875,1914~ 1915,1917,1939~1940,1942,1947~ 1949,2093,2103~2104,2115,3067~ 3070 protein:f:3~172 519,521~523,534,563,1186,1212~ 1214,1293~1295,1320~1322,3185~ 3187,3205~3208 protein:g:2~160 969,989,991~992,994,1050~1051, 1059,1061~1063,1092~1093,1095~ 1098,2626,2630~2632,2639~2641, 2698~2701,2705,2722~2724,2728, 2735~2737,2751,2755~2757 protein:h:11~107 1675~1678,1682~1683,1686~1688 protein:i:6~137 1896~1899,1901,2294~2295,2338~ 2339,2880,2917,2931~2932,3039~ 3043,3051,3092~3093,3095 protein:j:1~61 2110~2111,3050~3051,3083~3085, 3332~3333,3366,3369 protein:k:22~142 13,17~18,1521~1524,1558,1580,1 609,1829~1832,2523,2585 protein:l:2~126 190,200,213,215~218,225~226,22 9,335~336,375,378 protein:m:2~136 1629~1630,1633~1639,1710~1711, 1807~1808,2562~2563,2565 protein:n:2~149 38~40,70~71,88~90,94~96,283,30 4,640~641,661~662,705,709~710, 714~716,782,785,792~794,798~79 9,801,936~939,942~944,958,964~ 967,1114,1370,1372~1373,1426~1 428,1430~1431,2763,2765,2777,2 786~2788,2799~2800 protein:o:2~59 723,747~750,776,952~954,968~97 0,984,1065,1073~1076,1085,1087 ,1106,1117,1135~1136,1138~1139 ,2618,2721~2722,2737 protein:p:9~104 1712~1713,1728~1730,2552~2553 protein:q:4~110 1455~1460,1474,1476,1883,2345, 3056,3058~3059,3076,3323~3325, 3373~3374,3376,3384~3386 protein:r:2~127 424~426,437,634,638~640,645,65 5,944~947,1144~1146,1161~1162, 1338~1340,1366,1388~1389,1392, 1394,1403~1408,1410~1413,1433 protein:s:2~107 428~433,497~499,509,584,622~62 4,631~634,1150~1151,1167,1177~ 1180,1326~1327,1329,3170,3173~ 3176,3216,3218~3219,3275,3277, 3279 protein:t:2~110 1481,1483,1485~1488,1527,1589~ 1595,1597~1598,1606,1616,1638~ 1639,1643,1652~1655,1669,1694~ 1696,1707,1738,1802~1806,1835, 1854~1857,1859,2553,2555 protein:u:2~120 17~20,112,128,134~136,151~152 protein:v:3~100 72~73,116,155~157,264,266,271~ 273,293,295,297~298,309,315~31 6,2218 protein:w:2~85 23,53,55,347,353,359~364,813~8 19,884,901,903,921~922,929,149 0~1492,1844~1845,1851~1852,213 8~2139 protein:x:2~78 1612~1613,1699,1746~1748,1750~ 1751,1824~1826 protein:y:2~51 351,354~355,402,1492~1495,1517 ~1518,1521,1588,1833~1834,1843 ,1848 protein:z:77~127 1191,1207~1208,1269,1298~1299, 2847~2848,2895~2897,2908,3108, 3119~3121 |
|
| 2263 |
6n8o:B (3.5Å) |
121 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS000055688D | RF00001 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:A:3~3396 79~81,86,90,100,102~103 protein:G:7~295 1,5~8,10~11,14,22,26~27,31,33, 35~36,44~50,61~64,67,109,112,1 16~121 protein:I:25~244 85~87,96~97,99 protein:Z:3~218 64~65,91~92,107 protein:M:6~173 6,28~29,39~40,42~43,55~57 protein:f:3~172 76~77,87~88,96~98,100~101 protein:g:2~160 9~10 |
|
| 2264 |
6n8o:C (3.5Å) |
158 | GO:0003735 (F) structural constituent ... GO:0002181 (P) cytoplasmic translation GO:0005840 (C) ribosome GO:0022625 (C) cytosolic large ribosom... |
URS00001BF64E | RF00002 | Saccharomyces cerevisiae S288C 559292 |
30814529 | Assembly1 rna:A:3~3396 1~22,24~33,35~37,40,53~54,104, 109,114~115,126,129,139~157 protein:F:2~362 21,27 protein:J:24~250 149~152,154~155 protein:N:2~194 29~30 protein:a:2~204 140~143 protein:c:2~184 3~5,11~14 protein:k:22~142 60,100,131~136,147,151 protein:l:2~126 23~24,70~75,83~85,91 protein:u:2~120 35~38,49~50,60,63~66,86~87,97 protein:w:2~85 33~36,41~43,56~58,67,94~95,104 ,111 protein:y:2~51 45~46,51~53,75,113 |
|
| 2265 |
6n9e:1x (3.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30520988 | Assembly1 rna:1A:6~2906 11~13,24~25,74~76 rna:1a:4~1533 30~32,34,38~41 rna:1v:14~19 34~37 protein:1G:2~182 56~57 protein:10:2~84 2,76 protein:1i:2~128 32~33,35 protein:1m:2~124 28~29 MG:1x:101 49~50 |
|
| 2266 |
6n9e:2x (3.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30520988 | Assembly2 rna:2A:6~2897 12~13,24,74~76 rna:2a:4~1532 30~32,34,38~41 rna:2v:14~19 34~37 protein:2G:2~182 56~57 protein:20:2~84 2,64,76 protein:2i:2~128 32~33,35 protein:2m:3~124 28~29 |
|
| 2267 |
6n9f:1x (3.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30520988 | Assembly1 rna:1A:6~2906 3,11~12,24~25,74~76 rna:1a:4~1533 30~31,34,38,40~41 rna:1v:12~18 34~37 protein:1G:2~182 56~57 protein:1i:2~128 32~33,35 MG:1x:104 20,59~60 |
|
| 2268 |
6n9f:2x (3.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30520988 | Assembly2 rna:2A:6~2897 12~13,24,74~76 rna:2a:4~1532 30~32,34,38~41 rna:2v:14~19 34~37 protein:2G:2~182 56~57 protein:20:2~84 2,76 protein:2i:2~128 32~33,35 protein:2m:3~124 28~29 |
|
| 2269 |
6nd4:2 (4.3Å) |
146 | GO:0006396 (P) RNA processing GO:0005730 (C) nucleolus |
URS0000EEAD32 | RF01846 | Saccharomyces cerevisiae BY4741 1247190 |
31206356 | Assembly1 rna:0:15~606 39~55,62~73 rna:1:1~15 23~28 protein:O:2~856 59~61 protein:T:19~939 62~64 protein:U:1~438 30,32,36,39 protein:b:1~437 82,86~88,92,323,325 protein:e:5~125 80~82 protein:f:5~125 113,254~256 protein:g:129~570 118,200,247~249 |
|
| 2270 |
6nd5:1w (2.6Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 19,37~38,55~56,64,71,74~76 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 protein:1Q:1~141 53~54 protein:1m:2~124 38~40 MG:1a:1669 35~36 MG:1w:106 33,36 |
|
| 2271 |
6nd5:1x (2.6Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 2~3,11~13,24~25,74~76 rna:1a:4~1533 29~32,34,38~41 rna:1v:12~24 34~37 protein:1G:2~182 19,56~57 protein:10:2~84 63~64 protein:1i:2~128 33~35 protein:1m:2~124 28~29 MG:1x:107 59~60 |
|
| 2272 |
6nd5:1y (2.6Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 19,56,71~72,76 rna:1x:2~76 35~36 protein:1g:2~156 40~42 |
|
| 2273 |
6nd5:2w (2.6Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 12,19,37,55~56,64,74~76 rna:2a:4~1532 34~37 rna:2v:12~24 34~37 protein:2m:3~124 39~40 |
|
| 2274 |
6nd5:2x (2.6Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 11~13,24~25,74~76 rna:2a:4~1532 30~32,34,38~41 rna:2v:12~24 34~37 protein:2G:2~182 56~57 protein:20:2~84 2,63~64 protein:2i:2~128 32~33,35 protein:2m:3~124 28~29 MG:2x:101 75~76 MG:2x:102 22~23 |
|
| 2275 |
6nd5:2y (2.6Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 19,56,71~72,76 rna:2x:2~76 35~36 protein:21:2~98 73~75 protein:2g:2~156 30,40~42 |
|
| 2276 |
6nd6:1w (2.85Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 12,19,37~38,55~56,64,71,74~76 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 protein:1Q:1~141 52~54 protein:1m:2~124 38~39 |
|
| 2277 |
6nd6:1x (2.85Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 11~13,24~25,74~76 rna:1a:4~1533 29~32,34,38,40~41 rna:1v:12~24 34~37 protein:1G:2~182 19,56~57 protein:10:2~84 63~64 protein:1i:2~128 32~33,35 protein:1m:2~124 28~29 MG:1x:103 32,37 MG:1x:105 9,22 |
|
| 2278 |
6nd6:1y (2.85Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly1 rna:1A:6~2897 19,56,72,76 protein:11:2~98 75~76 protein:1g:2~156 31~33,40~42 MG:1y:102 12~13 |
|
| 2279 |
6nd6:2w (2.85Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 13,19,37,55~56,64,71,74~76 rna:2a:4~1532 34~35,37 rna:2v:12~24 34~37 protein:2Q:1~141 53~54 protein:2m:3~124 38~40 |
|
| 2280 |
6nd6:2x (2.85Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 11~13,24~25,74~76 rna:2a:4~1532 30~32,34,38,40~41 rna:2v:12~24 34~37 protein:2G:2~182 56~57 protein:2Q:1~141 64~65 protein:20:2~84 2,76 protein:2i:2~128 32~33,35 protein:2m:3~124 28~29 MG:2x:101 75~76 MG:2x:102 22~23 |
|
| 2281 |
6nd6:2y (2.85Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30733327 | Assembly2 rna:2A:6~2897 19,56,72,76 rna:2a:4~1532 37~38 protein:2g:2~156 31~32,37,39~41 |
|
| 2282 |
6ndk:QV (3.64Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30782843 | Assembly1 rna:QA:4~1533 29~32,34,38~41 rna:QX:16~23 34~37 rna:RA:6~2897 12~13,24~25,74~76 protein:QI:2~128 32~33 protein:RG:2~182 56~57 protein:R0:8~84 2~3,63 MG:QV:101 75~76 MG:QV:102 75~76 |
|
| 2283 |
6ndk:XV (3.64Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30782843 | Assembly2 rna:XA:4~1533 29~32,34,38,40~41 rna:XX:13~23 34~37 rna:YA:6~2897 11~13,24~25,74~76 protein:YG:2~182 19,56~57 protein:Y0:8~84 2~3 MG:XV:101 75~76 |
|
| 2284 |
6nuo:QV (3.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 30~31,34,38~42 rna:QX:1~19 35~37 rna:RA:6~2906 3,11~12,24~25,74~76 protein:QI:2~128 32~33,35 protein:QM:2~121 28~29 protein:RG:2~182 56~57 protein:R0:3~83 1~2 |
|
| 2285 |
6nuo:XV (3.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 30~31,34,38,41 rna:XX:1~19 34~37 rna:YA:6~2906 11~13,24~25,74~76 protein:YG:2~182 20,56~57 protein:YQ:1~141 1,64 |
|
| 2286 |
6nwy:QV (3.5Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1542 30~31,34,37,40~41 rna:QX:1~19 35~37 rna:RA:6~2897 3~4,19,56,70~71,76 |
|
| 2287 |
6nwy:XV (3.5Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1542 30,34,37,40~41 rna:XX:1~19 34~37 rna:YA:6~2897 3,19~20,56,70~71,76 |
|
| 2288 |
6o3m:QV (3.97Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly1 rna:QA:5~1531 31~33,35,39~42 rna:QX:4~22 36~38 rna:RA:6~2897 3,12,25,75~77 protein:QM:2~121 29~30 protein:RG:2~182 57~58 protein:R0:3~83 1~2,64 |
|
| 2289 |
6o3m:XV (3.97Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001DEEBE | RF00005 | Escherichia coli 562 |
33016876 | Assembly2 rna:XA:5~1531 31~33,35,39,41~42 rna:XX:1~19 35~38 rna:YA:6~2897 2~3,12~13,25~26,75~77 protein:XM:2~120 29~30 protein:YG:2~182 57~58 protein:Y0:10~83 64~65 MG:YA:3454 76~77 |
|
| 2290 |
6o7k:v (4.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
31108498 | Assembly1 protein:f:382~890 71,75~77 protein:o:3~129 34~36 rna:g:2~1540 31~32,35,39~40,42 rna:N:13~18 35~38 |
|
| 2291 |
6o8w:u (3.53Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Enterococcus faecalis 1351 |
33004869 | Assembly1 rna:a:3~1550 31~32,34,40~41 rna:v:15~19 34~37 rna:A:4~2911 3,18~19,56~57,70~71,76 protein:i:3~130 33,35 |
|
| 2292 |
6o97:1w (2.75Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30793894 | Assembly1 rna:1A:6~2897 12,19,37~38,55~56,64,71,74~76 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 protein:1Q:1~141 53~54 MG:1w:106 1~2 |
|
| 2293 |
6o97:1x (2.75Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30793894 | Assembly1 rna:1A:6~2897 11~13,24~25,74~76 rna:1a:4~1533 29~32,34,38~41 rna:1v:12~24 34~37 protein:1G:2~182 19,56~57 protein:1i:2~128 33~35 protein:1m:2~124 28~29 K:1A:4137 75~76 MG:1x:107 18,57~58 |
|
| 2294 |
6o97:1y (2.75Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30793894 | Assembly1 rna:1A:6~2897 19,56,72,76 protein:11:2~98 74~76 protein:1g:2~156 40~42 MG:1y:101 75~76 |
|
| 2295 |
6o97:2w (2.75Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30793894 | Assembly2 rna:2A:6~2897 12,19,37~38,52,56,64,74~76 rna:2a:4~1532 34~37 rna:2v:12~24 34~37 protein:2Q:1~141 52~54 protein:2m:3~124 39~40 |
|
| 2296 |
6o97:2x (2.75Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
30793894 | Assembly2 rna:2A:6~2897 11~13,24~25,74~76 rna:2a:4~1532 30~32,34,38,40~41 rna:2v:12~24 34~37 protein:2G:2~182 56~57 protein:2i:2~128 32~35 protein:2m:3~124 28~29 K:2A:3434 75~76 MG:2A:3863 75~76 MG:2x:102 22~23 |
|
| 2297 |
6o97:2y (2.75Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00003179F7 | RF00005 | Escherichia coli 562 |
30793894 | Assembly2 rna:2A:6~2897 19,56,71~72,76 protein:2g:2~156 31~32,34,40~42 |
|
| 2298 |
6o9j:v (3.9Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
31108498 | Assembly1 rna:B:1~2903 11~13,24,74~76 rna:a:5~1534 29~31,34,38~39,41 protein:F:1~178 19,55~57 |
|
| 2299 |
6o9k:y (4.0Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Escherichia coli 562 |
31108498 | Assembly1 rna:a:2~1540 31~33,35,39~40,42 rna:x:13~18 35~38 protein:i:3~129 34,36 protein:z:382~890 76~77 protein:F:1~177 52~53 protein:6:3~52 54,63 |
|
| 2300 |
6od9:A (4.102Å) |
62 | GO:0006730 (P) one-carbon metabolic pr... GO:1900371 (P) regulation of purine nu... |
URS0000868535 | RF01750 | Fusobacterium ulcerans 861 |
31282869 | Assembly1 MG:A:101 16,35 AMZ:A:102 16~17,35,63,70~71 K:A:104 31~32 |
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4576 RNAs.
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