SEQ2FUN

FURNA
Download all results in tab-seperated text for 3576 RNAs.
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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    201 2du3:D
    (2.6Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E059 RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 933~937
    202 2du4:C
    (2.8Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E059 RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 933~937
    203 2du5:D
    (3.2Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E26B RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 933~937
    204 2du6:D
    (3.3Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E16C RF00005 Archaeoglobus
    fulgidus
    2234    		 17351629 Assembly1
    protein:A:1~534 934~936
    205 2dxi:C
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly1
    protein:A:1~468 503,505,511~514,524~525,534~53
    9,569~571,574~576
    206 2dxi:D
    (2.2Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000052BB59 RF00005 Thermus
    thermophilus
    274    		 17161369 Assembly2
    protein:B:1~468 503~506,511~513,524~525,534~53
    8,569~570,574~576
    207 2ees:A
    (1.75Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DE3D RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38~39,66
    NCO:A:101 66~67
    NCO:A:102 38,56
    NCO:A:103 39,55~56,68~69
    NCO:A:104 30~32,66
    NCO:A:105 37~38,57
    NCO:A:107 41,53~54
    NCO:A:108 47,50
    NCO:A:109 24,71
    NCO:A:111 32~33
    HPA:A:90 21~22,47,51~52,74~75
    208 2eet:A
    (1.95Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DDBB RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38~39
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:107 41,53~54
    NCO:A:108 47,50~51
    NCO:A:111 32~33
    HPA:A:90 21~22,47,51~52,74~75
    209 2eeu:A
    (1.95Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080E2FB RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38~39
    NCO:A:101 28,66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 31~32,66
    NCO:A:105 37~38
    NCO:A:107 41,53~54
    NCO:A:108 46~47
    NCO:A:109 24,71
    NCO:A:111 32~33
    NCO:A:112 72~73
    HPA:A:90 21~22,47,51~52,74~75
    210 2eev:A
    (1.95Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DFC6 RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:95 32~33,38
    NCO:A:101 28,66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:106 26~27
    NCO:A:107 41,53~54
    NCO:A:108 46~47
    NCO:A:109 24,71
    NCO:A:110 21~22
    NCO:A:111 32~33
    NCO:A:112 72~73
    HPA:A:90 21~22,47,51~52,74~75
    211 2eew:A
    (2.25Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080E008 RF00167 Bacillus
    subtilis
    1423    		 17960911 Assembly1
    ACT:A:96 32~33,38,66
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 31~32,66
    NCO:A:105 37~38
    NCO:A:111 32~33
    NCO:A:112 72~73
    HPA:A:90 21~22,47,51~52,74~75
    212 2f88:A

    		 34 GO:0000373 (P) Group II intron splicing URS000080E292 RF00029 synthetic
    construct
    32630    		 16428604
    213 2fdt:A

    		 36 GO:0032197 (P) retrotransposition URS000080DE48 RF00436 synthetic
    construct
    32630    		 17000640
    214 2fk6:R
    (2.9Å)
    		 53 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE34 RF00005 Bacillus
    subtilis
    1423    		 16518398 Assembly1
    protein:A:1~307 3~4,19,56,61~62,73
    protein:A-2:1~307 1,72~73
    215 2fmt:C
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 synthetic
    construct
    32630    		 9843487 Assembly1
    protein:A:1~314 2,11~13,24~25,69~76
    216 2fmt:D
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 synthetic
    construct
    32630    		 9843487 Assembly2
    protein:B:1~314 2,11~14,24~25,69~76
    217 2g9c:A
    (1.7Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DFC3 RF00167 Bacillus
    subtilis
    1423    		 17076468 Assembly1
    ACT:A:96 32~33,38~39
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:106 26~27
    NCO:A:107 41,53~54
    NCO:A:108 47,50~51
    NCO:A:109 24,71
    NCO:A:111 32~33
    3AY:A:91 21~22,51~52,74~75
    218 2gcs:B
    (2.1Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:0~20 23~37,39~40,58,60~65,67,115~11
    7
    MG:B:501 36~37
    MG:B:503 79,81
    MG:B:504 57,59
    219 2gcv:B
    (2.1Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:1~20 23~37,58,60~65,115~117
    MES:A:501 65~66
    MES:B:502 40,65,67
    MG:B:401 36~37
    MG:B:403 79,81
    MG:B:404 57,59
    220 2gis:A
    (2.9Å)
    		 94 GO:0010468 (P) regulation of gene expr... URS000080DF35 RF00162 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16810258 Assembly1
    MG:A:205 10,63~64
    MG:A:206 84~85
    IRI:A:202 16~18
    IRI:A:203 23,25~28
    IRI:A:204 4~5,88
    SAM:A:301 7,11,45~47,57~59,88~89
    221 2gm0:A

    		 35 GO:0019074 (P) viral RNA genome packaging URS000080DE12 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16603544 Assembly1
    rna:B:36~70 1~35
    222 2gm0:B

    		 35 GO:0019074 (P) viral RNA genome packaging URS000080DE12 RF00175 Human
    immunodeficiency
    virus
    1
    11676    		 16603544 Assembly1
    rna:A:1~35 36~70
    223 2go5:A
    (7.4Å)
    		 127 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DFD3 RF00017
    RF01856    		 Canis
    sp.
    9616    		 16675701 Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:W:326~434 184~185,192~195,207~208
    protein:1:-1~130 231~235
    224 2h0s:B
    (2.35Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:-2~20 23~37,39~40,58,60~67,115~117
    MG:B:301 36~37
    MG:B:302 79,81
    MG:B:303 57,59
    225 2h0w:B
    (2.4Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:1~20 23~37,58,60~65,115~117
    MG:B:501 36~37
    MG:B:503 79,81
    MG:B:504 57,59
    MES:B:601 65~66
    MES:B:602 40,65,67
    226 2h0x:B
    (2.3Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:0~20 23~37,39~40,58,60~65,67,115~11
    7
    MG:B:501 36~37
    MG:B:503 79,81
    MG:B:504 57,59
    227 2h0z:B
    (2.7Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:0~20 23~35,37,39~40,58,60~67,115~11
    7
    G6P:A:301 51,66
    MG:A:401 35~36
    MG:B:402 57,59
    MG:B:403 79,81
    228 2ho6:B
    (2.8Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:1~20 23~37,58,60~65,115~117
    MG:B:201 36~37
    MG:B:202 79,81
    MG:B:203 57,59
    MES:B:402 40,65,67
    229 2ho7:B
    (2.9Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 16990543 Assembly1
    rna:A:0~20 23~37,39~40,58,60~67,115~117
    G6P:A:401 50,65
    MG:B:201 36~37
    MG:B:202 57,59
    MG:B:204 79,81~82
    230 2iy3:B
    (16.0Å)
    		 110 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DE7C RF00169 Escherichia
    coli
    562    		 17086205
    231 2iy5:T
    (3.1Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E078 RF00005 Thermus
    thermophilus
    HB8
    300852    		 16939209 Assembly1
    protein:A:15~350 19,28,42~45,56~57
    protein:B:1~780 1,11~12,24~26,33~37
    protein:A-2:15~350 69,76
    protein:B-2:1~780 10~11,67,73~75
    232 2j28:8
    (9.5Å)
    		 74 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E293 RF00169 Escherichia
    coli
    562    		 17086193 Assembly1
    protein:9:2~431 39,47~49,62~63
    233 2j37:A
    (8.7Å)
    		 128 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS000080DE1E RF00017
    RF01856    		 Canis
    sp.
    9616    		 17086193 Assembly1
    protein:B:14~120 141~143,147~151,195~198,203~20
    4
    protein:W:8~488 184~185,192~195,207~208
    234 2jtp:A

    		 34 GO:0075523 (P) viral translational fra... URS000080E15C RF01835 synthetic
    construct
    32630    		 17868691
    235 2k4c:A

    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000009F4BF RF00005 Escherichia
    coli
    562    		 18787959
    236 2ke6:A

    		 48 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 URS000080DEE0 RF00207 Drosophila
    melanogaster
    7227    		 20473315
    237 2krl:A

    		 102 GO:1902679 (P) negative regulation of ... URS000080E1F0 RF00500 Turnip
    crinkle
    virus
    11988    		 20080629
    238 2kur:A

    		 48 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 URS000080E344 RF00207 Drosophila
    melanogaster
    7227    		 20473315
    239 2kuu:A

    		 48 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 URS000080E155 RF00207 Drosophila
    melanogaster
    7227    		 20473315
    240 2kuv:A

    		 48 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 URS000080DE75 RF00207 Drosophila
    melanogaster
    7227    		 20473315
    241 2kuw:A

    		 48 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 URS000080E2A2 RF00207 Drosophila
    melanogaster
    7227    		 20473315
    242 2l1f:A

    		 65 GO:0019072 (P) viral genome packaging URS000080DD56 RF00374 Moloney
    murine
    leukemia
    virus
    11801    		 20933521 Assembly1
    rna:B:709~774 310,328,330~334,352~353,362,36
    4~369
    243 2l1f:B

    		 66 GO:0019072 (P) viral genome packaging URS000080DE60 RF00374 Moloney
    murine
    leukemia
    virus
    11801    		 20933521 Assembly1
    rna:A:309~373 710,728,730~734,752~753,762,76
    4~769
    244 2l3j:B

    		 71 GO:0035195 (P) miRNA-mediated post-tra...
    GO:0016442 (C) RISC complex    		 URS000080DF7D RF02095 Rattus
    norvegicus
    10116    		 20946981 Assembly1
    protein:A:1~236 245~248,255,258,260~261,268~26
    9,277~279,287~288,290~293,299~
    300
    245 2l94:A

    		 45 GO:0075523 (P) viral translational fra... URS000080E22A RF00480 Human
    immunodeficiency
    virus
    1
    11676    		 21648432 Assembly1
    L94:A:46 9~11,26~27,33~34
    246 2lc8:A

    		 56 GO:0039705 (P) viral translational rea... URS0000A7636D RF01073 Moloney
    murine
    leukemia
    virus
    11801    		 22121021
    247 2lkr:A

    		 111 GO:0030621 (F) U4 snRNA binding
    GO:0045131 (F) pre-mRNA branch point b...
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0000348 (P) mRNA branch site recogn...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...
    GO:0005686 (C) U2 snRNP    		 URS000080E147 RF00026
    RF00004    		 Saccharomyces
    cerevisiae
    4932    		 22328579
    383
    248 2lps:A

    		 34 GO:0000373 (P) Group II intron splicing URS000080DF0B RF00029 Saccharomyces
    cerevisiae
    4932    		 22714631
    14745440
    249 2lpt:A

    		 34 GO:0000373 (P) Group II intron splicing URS000080E292 RF00029 synthetic
    construct
    32630    		 22714631
    16428604
    250 2mf0:G

    		 72 GO:0006109 (P) regulation of carbohydr...
    GO:0006401 (P) RNA catabolic process    		 URS000080DEDE RF00166 Pseudomonas
    fluorescens
    294    		 24828038 Assembly1
    protein:A:1~59 23,25,27~31,45,48~50,53
    protein:B:1~59 21~23,26~28,30~32,45~53
    protein:C:1~59 3~4,6,8~12,59~61,63~65,67~69
    protein:D:1~59 2~4,6~9,12,60~61,63~68
    protein:E:1~59 38~40,42~43
    protein:F:1~59 38~42
    251 2mf1:G

    		 72 GO:0006109 (P) regulation of carbohydr...
    GO:0006401 (P) RNA catabolic process    		 URS000080DEDE RF00166 Pseudomonas
    fluorescens
    294    		 24828038 Assembly1
    protein:A:1~59 18~20,25,27~31,44~46,48~50,52~
    54
    protein:B:1~59 21~23,26~32,46~53
    protein:C:1~59 3~4,6,8~12,59~61,63~65,67~69
    protein:D:1~59 2~9,12,60~61,63~68
    protein:E:1~59 38~40,42~43,57~58,72
    protein:F:1~59 38~43,72
    252 2miy:A

    		 59 GO:0008616 (P) queuosine biosynthetic ... URS000080E2D6 RF01054 Streptococcus
    pneumoniae
    1313    		 24469808 Assembly1
    PRF:A:101 7~8,19~20,50~51
    253 2n1q:A

    		 155 GO:0019074 (P) viral RNA genome packaging
    GO:0043484 (P) regulation of RNA splicing    		 URS000086851D RF01381
    RF00175
    RF01380    		 Human
    immunodeficiency
    virus
    1
    11676    		 25999508
    254 2n7m:X

    		 92 GO:0017070 (F) U6 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005687 (C) U4 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 URS00008FED30 RF00015 Saccharomyces
    cerevisiae
    4932    		 26655855
    255 2nqp:F
    (3.5Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004EADCF RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:C:7~270 16,19~20,56
    protein:D:8~270 16,22~25,40
    K:F:77 60~62
    K:F:78 48~49,59~60
    K:F:79 54~55,58
    K:F:80 20,20A
    K:F:81 20,20A,48,59~60
    256 2nr0:E
    (3.9Å)
    		 81 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:A:7~270 16,23,25,31,39~40
    protein:B:7~270 19,56
    257 2nr0:F
    (3.9Å)
    		 72 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:A:7~270 19~20,56
    protein:B:7~270 16~17,23~25,33~34,36~41
    258 2nr0:G
    (3.9Å)
    		 67 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly2
    protein:C:7~270 16~17,23~25,30,32,35~36,39~42
    protein:D:7~270 16,19~20,56
    259 2nr0:H
    (3.9Å)
    		 65 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly2
    protein:C:7~270 16,19~20,56
    protein:D:7~270 16,23~25,31,39~40
    260 2nre:F
    (4.0Å)
    		 56 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004630EA RF00005 Escherichia
    coli
    562    		 17466622 Assembly1
    protein:A:7~270 16,23,25
    K:F:78 17~18
    261 2nz4:P
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly1
    rna:E:-1~11 12,23~30,32~33,50,52~59,111~11
    2
    protein:A:7~96 14,16,17B,17C,17D,17E,17F,17G,
    17H,17K,17L
    GLP:P:5001 42~43,57
    MG:P:9010 28~30
    262 2nz4:Q
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly2
    rna:F:-1~11 12,23~30,32~33,50,52~57,59,111
    ~112
    protein:B:5~98 13,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    GLP:F:5002 42~43,57~58
    MG:Q:9012 28~30
    263 2nz4:R
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly3
    rna:G:-1~11 12,23~30,32~33,50,52~59,111~11
    2
    protein:C:8~97 12,14,17B,17C,17D,17E,17F,17G,
    17H,17K,17L
    GLP:G:5003 42~43,57
    MG:R:9014 29~30
    264 2nz4:S
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly4
    rna:H:-1~11 12,23~30,32~33,50,52~59,111~11
    2
    protein:D:7~96 14,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    GLP:H:5004 42~43,57
    MG:H:9016 29~30
    265 2ob7:A
    (13.6Å)
    		 328 GO:0006401 (P) RNA catabolic process URS000080DFA2 RF00023 Thermus
    thermophilus
    274    		 17179154
    266 2om7:M
    (7.3Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E2DD RF00005 Thermus
    thermophilus
    274    		 17349960 Assembly1
    rna:J:2094~2195 19,56
    protein:K:18~223 54,63~64
    267 2pxb:B
    (2.5Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E210 RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    NCO:B:201 137,170~171
    NCO:B:202 144~145,163
    NCO:B:203 148~151
    NCO:B:206 146,161~162
    NCO:B:207 131~132,171
    NCO:B:208 131~132,175
    268 2pxd:B
    (2.0Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E1B6 RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 140~141,148~151,163~164
    NCO:B:201 137,170
    NCO:B:202 144~146,163
    NCO:B:203 148~151
    NCO:B:206 146~147,162
    NCO:B:207 131~133,175
    269 2pxe:B
    (2.0Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E2BA RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    NCO:B:201 137,170~171
    NCO:B:202 144~146,163
    NCO:B:203 148~151
    NCO:B:206 147,161~162
    NCO:B:207 131,133
    270 2pxp:B
    (2.5Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DFAC RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    NCO:B:201 170~171
    NCO:B:202 144~146,163
    NCO:B:203 148~151
    NCO:B:206 146,161~162
    NCO:B:207 131~132
    271 2pxq:B
    (2.5Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E073 RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    NCO:B:201 137,170~171
    NCO:B:202 144~146,163
    NCO:B:203 148~151
    NCO:B:206 146~147,161~162
    NCO:B:207 131,175~176
    272 2pxt:B
    (2.5Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E32F RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    NCO:B:201 137,170~171
    NCO:B:202 144~145,163
    NCO:B:203 148~150
    NCO:B:206 146~147,162
    NCO:B:207 175~176
    273 2pxu:B
    (2.5Å)
    		 49 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E2C9 RF00169 synthetic
    construct
    32630    		 17637337 Assembly1
    protein:A:1~82 139~141,148~151,163~164
    NCO:B:201 137,170~171
    NCO:B:202 144~145,163~164
    NCO:B:203 148~151
    NCO:B:206 146~147,162
    NCO:B:208 131~132,170~171
    274 2qbz:X
    (2.6Å)
    		 153 GO:0010468 (P) regulation of gene expr...
    GO:0032026 (P) response to magnesium ion    		 URS000080E29A RF00380 Bacillus
    subtilis
    1423    		 17803910 Assembly1
    MG:X:201 100,102~104
    MG:X:202 23,100
    MG:X:203 24~25
    MG:X:206 80~81
    K:X:301 27~29,155,157~158
    K:X:302 66~67,74~75,106~107
    K:X:303 25,72~73,161~162
    K:X:304 23~24
    275 2r8s:R
    (1.95Å)
    		 159 GO:0000372 (P) Group I intron splicing URS000080E2DA RF00028 synthetic
    construct
    32630    		 18162543 Assembly1
    protein:L:1~214 130,167,169~173,195~197
    protein:H:1~224 130~133,166~167,175~176,179
    MG:R:1001 183~184,186
    MG:R:1002 184,186~188
    MG:R:1004 257~258
    276 2rd2:B
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000115891 RF00005 Escherichia
    coli
    562    		 18477696 Assembly1
    protein:A:8 902~903,906~907,911~913,916,92
    5,927,934~938,971~976
    277 2re8:B
    (2.6Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000115891 RF00005 Escherichia
    coli
    562    		 18477696 Assembly1
    protein:A:8 902~904,906~907,910~914,925,92
    7,934~938,972~976
    278 2rkj:C
    (4.5Å)
    		 238 GO:0000372 (P) Group I intron splicing URS000080E20D RF00028 Twortvirus
    twort
    55510    		 18172503 Assembly1
    rna:D:1~4 9~13,34,36~38,84,182~185,187
    protein:B:39~416 47~51,88~91,109,123~124,203,21
    2
    279 2rkj:G
    (4.5Å)
    		 238 GO:0000372 (P) Group I intron splicing URS000080E20D RF00028 Twortvirus
    twort
    55510    		 18172503 Assembly2
    rna:H:1~4 9~13,34,36~38,84,182~185,187
    protein:F:39~416 47~48,50~52,88~91,109,123~124,
    203,212
    280 2rkj:K
    (4.5Å)
    		 238 GO:0000372 (P) Group I intron splicing URS000080E20D RF00028 Twortvirus
    twort
    55510    		 18172503 Assembly3
    rna:L:1~4 9~13,34,36~38,84,182~185,187
    protein:J:39~416 47~48,50~52,88~91,109,123~124,
    203,212
    281 2rkj:O
    (4.5Å)
    		 238 GO:0000372 (P) Group I intron splicing URS000080E20D RF00028 Twortvirus
    twort
    55510    		 18172503 Assembly4
    rna:P:1~4 9~13,34,36~38,84,182~185,187
    protein:N:39~416 47~48,50~51,88~91,109,123~124,
    203,212
    282 2tra:A
    (3.0Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Saccharomyces
    cerevisiae
    4932    		 3272146
    283 2v0g:B
    (3.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E15F RF00005 Thermus
    thermophilus
    274    		 17588934 Assembly1
    protein:A:1~876 4~5,12~13,19~20,22~26,56,70,74
    ~76
    284 2v0g:F
    (3.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E15F RF00005 Thermus
    thermophilus
    274    		 17588934 Assembly2
    protein:D:1~876 4,12~13,19~20,20A,22~25,39,56,
    72,74~76
    285 2v3c:M
    (2.5Å)
    		 96 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DDBC RF00169 Methanocaldococcus
    jannaschii
    2190    		 17846429 Assembly1
    protein:A:1~87 157~167,206~208,215~216
    protein:C:2~427 142,187,195,203~206,213,218~22
    2,232~233
    286 2v3c:N
    (2.5Å)
    		 96 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DDBC RF00169 Methanocaldococcus
    jannaschii
    2190    		 17846429 Assembly2
    protein:B:1~87 157~160,162~167,206~209,216
    protein:D:2~427 142,195~196,203~205,218~220
    287 2vaz:A
    (10.0Å)
    		 82 GO:0045974 (P) regulation of translati... URS0002335951 RF00114 Escherichia
    coli
    562    		 17889647
    288 2xkv:B
    (13.5Å)
    		 96 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E14C RF00169 Escherichia
    coli
    562    		 21151118 Assembly1
    protein:C:23~65 38~40,47~50,63~64
    289 2xnw:A
    (1.5Å)
    		 65 GO:0009113 (P) purine nucleobase biosy... URS000080DFC3 RF00167 Bacillus
    subtilis
    1423    		 21439477 Assembly1
    NCO:A:1081 66~67
    NCO:A:1082 39,56,69
    NCO:A:1083 30~32,66
    NCO:A:1084 46~47
    NCO:A:1085 72~73
    NCO:A:1086 37~38
    NCO:A:1087 57~58
    ACT:A:1088 32~33,38~39,66
    ZZR:A:1089 21~22,47,51~52,74~75
    290 2xnz:A
    (1.59Å)
    		 65 GO:0009113 (P) purine nucleobase biosy... URS000080DFC3 RF00167 Bacillus
    subtilis
    1423    		 21439477 Assembly1
    NCO:A:1082 39,56,69
    NCO:A:1083 30~32,66
    NCO:A:1085 57~58
    NCO:A:1086 24,71
    ACT:A:1087 32~33,38~39,66
    3AW:A:1088 21~22,47,51~52,74~75
    K:A:1090 20,48~49
    K:A:1091 37~38
    K:A:1094 26,69
    291 2xo0:A
    (1.7Å)
    		 65 GO:0009113 (P) purine nucleobase biosy... URS000080DFC3 RF00167 Bacillus
    subtilis
    1423    		 21439477 Assembly1
    ACT:A:102 32~33,38~39,66
    NCO:A:103 28,66~67
    NCO:A:104 39,56,69
    NCO:A:105 30~32,66
    NCO:A:106 37~38
    NCO:A:107 24,71
    K:A:108 41,54
    K:A:109 51~52,74~75
    K:A:113 20,49
    ZZS:A:110 21~22,51~52,74~75
    292 2xo1:A
    (1.6Å)
    		 65 GO:0009113 (P) purine nucleobase biosy... URS00008FED1E RF00167 Bacillus
    subtilis
    1423    		 21439477 Assembly1
    N6M:A:1081 21~22,47,51~52,74~75
    NCO:A:1083 39,56,69
    NCO:A:1084 30~32,66
    NCO:A:1085 57~58
    NCO:A:1087 24,71
    NCO:A:1088 37~38
    ACT:A:1089 32~33,38~39
    K:A:1091 41,53
    K:A:1092 26,69
    293 2xxa:F
    (3.94Å)
    		 102 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS00003F3490 RF00169 Deinococcus
    radiodurans
    1299    		 21330537 Assembly2
    protein:C:7~431 34,42~45,57~59,83
    protein:D:20~302 10,83,85,94~97
    294 2xxa:G
    (3.94Å)
    		 102 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS00003F3490 RF00169 Deinococcus
    radiodurans
    1299    		 21330537 Assembly1
    protein:A:4~431 34~35,42~45,57~59,83
    protein:B:20~302 10,83,94~97
    295 2ydh:A
    (2.9Å)
    		 94 GO:0010468 (P) regulation of gene expr... URS000080E1B3 RF00162 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 21893284 Assembly1
    rna:A-2:1~94 32~34
    BA:A:1095 26~28
    BA:A:1097 10,64
    SAM:A:1100 7~8,11,45,47,57~59,88~89
    296 2ygh:A
    (2.6Å)
    		 95 GO:0010468 (P) regulation of gene expr... URS0000BC4670 RF00162 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 21893284 Assembly1
    SAM:A:1096 7~8,11,45~47,57~59,88~89
    NA:A:1097 10~11,64
    297 2z74:B
    (2.2Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17804015 Assembly1
    rna:A:-1~20 23~35,37,39~40,58,60~67,115~11
    7
    G6P:A:201 65~66
    MG:B:301 35~36
    MG:B:302 57,59
    298 2z75:B
    (1.7Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    MB4
    273068    		 17804015 Assembly1
    rna:A:-1~20 23~37,39~40,58,60~65,67,115~11
    7
    GLP:A:201 50,65~66
    MG:B:301 36~37
    MG:B:302 79,81
    MG:B:303 57,59
    MG:B:307 60~61
    MG:B:308 60~61
    299 2z9q:A
    (11.7Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E1EE RF00005 Thermus
    aquaticus
    271    		 12859903
    300 2zm5:C
    (2.55Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19435325 Assembly1
    protein:A:9~314 26~41
    MG:C:77 17,19
    MG:C:79 7~8,14
    MG:C:81 58~59
    MG:C:82 22,46
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.