SEQ2FUN

FURNA
Download all results in tab-seperated text for 3576 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    301 2zm5:D
    (2.55Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19435325 Assembly2
    protein:B:7~311 26~30,32~41
    302 2zue:B
    (2.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00000D2896 RF00005 Pyrococcus
    horikoshii
    53953    		 19656186 Assembly1
    protein:A:2~629 905,907,913~914,919~920,920A,9
    23~925,935~941,956,969~972,974
    303 2zuf:B
    (2.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00000D2896 RF00005 synthetic
    construct
    32630    		 19656186 Assembly1
    protein:A:2~629 904~905,907,913~914,919~920,92
    0A,923~925,935~941,956,970~972
    ,974
    304 2zxu:C
    (2.75Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19435325 Assembly1
    protein:A:9~314 26~30,32~41
    MG:C:77 17,19
    MG:C:79 7~8,14
    MG:C:81 58~59
    MG:C:82 22,46
    305 2zxu:D
    (2.75Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19435325 Assembly2
    protein:B:7~311 26~41
    306 2zzm:B
    (2.65Å)
    		 84 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001612D2 RF00005 Methanocaldococcus
    jannaschii
    2190    		 19749755 Assembly1
    protein:A:2~334 11~12,19~20,22~26,34~41,56~57
    307 2zzn:C
    (2.95Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00000B8EA0 RF00005 Methanocaldococcus
    jannaschii
    2190    		 19749755 Assembly1
    protein:A:1~336 11~13,19~23,25~26,32~34,36~41,
    56~57,69
    308 2zzn:D
    (2.95Å)
    		 71 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00000B8EA0 RF00005 Methanocaldococcus
    jannaschii
    2190    		 19749755 Assembly2
    protein:B:2~336 11~12,18~20,25~26,32~34,36~41,
    56~57
    309 3a2k:C
    (3.65Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E29F RF00005 Bacillus
    subtilis
    1423    		 19847269 Assembly1
    protein:A:1~462 1,10~13,26~27,33~40,67~73,75
    310 3a2k:D
    (3.65Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E29F RF00005 Bacillus
    subtilis
    1423    		 19847269 Assembly2
    protein:B:1~462 1,10~11,26~27,33~40,67~70,72~7
    5
    311 3a3a:A
    (3.1Å)
    		 86 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000014E598 RF01852
    RF00005    		 Homo
    sapiens
    9606    		 19692584
    1285

    s70

    787

    757

    805
    312 3adb:C
    (2.8Å)
    		 92 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE1A RF01852 Methanopyrus
    kandleri
    2320    		 20705242 Assembly1
    protein:A:-1~248 1,13,15,19~20,20A,21~24,41,47M
    ,56,68~69,75~76
    313 3adb:D
    (2.8Å)
    		 92 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE1A RF01852 Methanopyrus
    kandleri
    2320    		 20705242 Assembly1
    protein:B:-10~248 1~2,15,19~20,20A,21~22,42,56,6
    8~71,73~76
    314 3adc:C
    (2.9Å)
    		 88 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE1A RF01852 Methanopyrus
    kandleri
    2320    		 20705242 Assembly1
    protein:A:-1~248 1~2,15,19~20,20A,21~23,41,68~7
    1,73~76
    315 3adc:D
    (2.9Å)
    		 92 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE1A RF01852 Methanopyrus
    kandleri
    2320    		 20705242 Assembly1
    protein:B:-1~248 1~2,16,19~20,20A,22,56,69~76
    316 3add:C
    (2.4Å)
    		 88 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE1A RF01852 Methanopyrus
    kandleri
    2320    		 20705242 Assembly1
    protein:A:-2~248 1,14~15,19~20,20A,21~23,41,47M
    ,68~69,75~76
    317 3add:D
    (2.4Å)
    		 88 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE1A RF01852 Methanopyrus
    kandleri
    2320    		 20705242 Assembly1
    protein:B:-1~248 1~2,15,19~20,20A,56,68~71,73~7
    4
    318 3akz:E
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000002EA11 RF00005 Thermotoga
    maritima
    2336    		 20882017 Assembly4
    protein:A:24~486 3~7,11~13,24~25,34~39,68~71,74
    ~76
    319 3akz:F
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000002EA11 RF00005 Thermotoga
    maritima
    2336    		 20882017 Assembly1
    protein:B:24~486 3~8,11~13,24~26,34~38,69~71,74
    ~76
    320 3akz:G
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000002EA11 RF00005 Thermotoga
    maritima
    2336    		 20882017 Assembly3
    protein:C:24~486 3~6,11~13,24~26,34~39,69~71,74
    ~76
    321 3akz:H
    (2.9Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000002EA11 RF00005 Thermotoga
    maritima
    2336    		 20882017 Assembly2
    protein:D:24~486 3~7,11~13,25~26,34~39,69~71,74
    ~76
    322 3al0:E
    (3.368Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000002EA11 RF00005 synthetic
    construct
    32630    		 20882017 Assembly1
    protein:B:1~482 1,18~20,54,56,61~63
    protein:C:3~590 4~6,12~14,24~25,34~38,69~72,74
    ~76
    323 3amt:B
    (2.9Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E317 RF00005 Archaeoglobus
    fulgidus
    2234    		 22002223 Assembly1
    protein:A:0~420 1,24~26,33~40,69~72
    324 3amu:B
    (3.1Å)
    		 78 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E317 RF00005 Archaeoglobus
    fulgidus
    2234    		 22002223 Assembly1
    protein:A:0~420 24~27,31,33~34,36~40,69~72
    325 3b0v:A
    (3.51Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000490B64 RF00005 Thermus
    thermophilus
    HB8
    300852    		 22123979 Assembly1
    protein:C:1 14,16,19~20,22~25,39~42,56~57
    326 3b0v:B
    (3.51Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000490B64 RF00005 Thermus
    thermophilus
    HB8
    300852    		 22123979 Assembly2
    protein:D:1 14,17,19~20,22~25,39~42,56~57
    327 3b4a:B
    (2.7Å)
    		 122 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E06F RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    rna:A:-2~20 24~35,37,39~40,58,60~67,115~11
    7
    GLP:A:401 51,65
    MG:B:201 36~37
    MG:B:202 38~39
    MG:B:203 56~57,59
    328 3b4b:B
    (2.7Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E06F RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    rna:A:1~20 23~37,39~40,58,60~65,115~117
    GLP:A:201 65~66
    3AD:A:-1 40,65~67
    MG:B:301 36~37
    329 3b4c:B
    (3.0Å)
    		 121 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    rna:A:1~20 23~37,39~40,58,60~65,115~117
    3AD:A:-1 40,65~67
    MG:B:301 36~37
    330 3bbv:z
    (10.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Thermus
    thermophilus
    274    		 19013177
    331 3bo2:B
    (3.31Å)
    		 197 GO:0000372 (P) Group I intron splicing URS000080E37C RF00028 synthetic
    construct
    32630    		 18408159 Assembly1
    rna:C:191~206 61~62,83~85,127~128,130,172,17
    9~190
    rna:D:1~6 4~10,59~60,87
    rna:E:1~3 10~12,37,87~88,168~169
    protein:A:4~98 105,1003~1009,1012~1013
    MG:B:1 88,170,172
    MG:B:2 128,172
    MG:B:3 173~174
    MG:B:1016 124,171
    MG:B:1018 38~39
    MG:B:1019 48,133
    332 3bo3:B
    (3.4Å)
    		 197 GO:0000372 (P) Group I intron splicing URS000080E37C RF00028 synthetic
    construct
    32630    		 18408159 Assembly1
    rna:C:191~206 61~62,83~84,127~128,130,172~17
    3,178,180~190
    rna:D:1~9 4~12,37,59~60,87~88,167~169,17
    2
    protein:A:4~98 1003~1009,1012~1013
    MG:B:1 88,170,172
    MG:B:2 128,172
    MG:B:3 173~174
    MG:B:1020 124,171
    MG:B:1021 38~39
    K:B:1015 22~24
    333 3bo4:B
    (3.33Å)
    		 197 GO:0000372 (P) Group I intron splicing URS000080E37C RF00028 synthetic
    construct
    32630    		 18408159 Assembly1
    rna:C:191~206 61~62,83~84,127~128,130,172,17
    9~190
    rna:D:1~9 4~12,37~38,60,87,168
    protein:A:4~98 1003~1009,1012~1013
    MG:B:1 88,170,172
    MG:B:2 87,128,172
    MG:B:3 173~174
    MG:B:1022 124,170~171
    MG:B:1023 38~39
    K:B:1015 149~152
    K:B:1016 124~127,171
    K:B:1017 22~24
    334 3bwp:A
    (3.1Å)
    		 356 GO:0000373 (P) Group II intron splicing URS000080DD31 RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 18388288 Assembly1
    MG:A:413 375,377
    MG:A:414 358~359,377
    K:A:420 3~5,376
    K:A:421 66~68,120
    335 3cw1:V
    (5.493Å)
    		 138 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0005685 (C) U1 snRNP    		 URS000080E05C RF00003 Homo
    sapiens
    9606    		 19325628
    10025403
    21516107
    15312772
    10931958
    7984237
    2374709
    121

    760

    1031

    s52

    509
    336 3cw1:v
    (5.493Å)
    		 138 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0005685 (C) U1 snRNP    		 URS000080E05C RF00003 Homo
    sapiens
    9606    		 19325628
    10025403
    21516107
    15312772
    10931958
    7984237
    2374709
    121

    760

    1031

    s52

    509
    337 3cw1:w
    (5.493Å)
    		 138 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0005685 (C) U1 snRNP    		 URS000080E05C RF00003 Homo
    sapiens
    9606    		 19325628
    10025403
    21516107
    15312772
    10931958
    7984237
    2374709
    121

    760

    1031

    s52

    509
    338 3cw1:x
    (5.493Å)
    		 138 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0005685 (C) U1 snRNP    		 URS000080E05C RF00003 Homo
    sapiens
    9606    		 19325628
    10025403
    21516107
    15312772
    10931958
    7984237
    2374709
    121

    760

    1031

    s52

    509
    339 3cw5:A
    (3.1Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 18653533
    340 3cw6:A
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Escherichia
    coli
    562    		 18653533
    341 3d0u:A
    (2.8Å)
    		 161 GO:0009085 (P) lysine biosynthetic pro... URS000080DFA3 RF00168 Thermotoga
    maritima
    2336    		 18593706 Assembly1
    IRI:A:202 138~139,148~149
    IRI:A:203 120~122
    IRI:A:204 80~81
    LYS:A:205 8~9,77,111~112,152
    342 3d0x:A
    (2.95Å)
    		 161 GO:0009085 (P) lysine biosynthetic pro... URS000080DFA3 RF00168 Thermotoga
    maritima
    2336    		 18593706
    343 3deg:A
    (10.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 19172743 Assembly1
    rna:J:1944~1961 75~76
    rna:K:2547~2561 74,76
    protein:C:1~545 8~12,66~71
    344 3deg:B
    (10.9Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 19172743
    345 3dhs:A
    (3.6Å)
    		 215 EC:3.1.26.5 ribonuclease P
    GO:0004526 (F) ribonuclease P activity
    GO:0008033 (P) tRNA processing
    GO:0030680 (C) dimeric ribonuclease P ...    		 URS000080DF78 RF00011 Geobacillus
    stearothermophilus
    1422    		 19095619
    346 3dig:X
    (2.8Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:X:200 11~12,14,115
    NA:X:201 20,71
    NA:X:203 25,67~69
    NA:X:205 11~12
    NA:X:212 123~125
    SLZ:X:175 11~12,80~81,114~115,163
    347 3dil:A
    (1.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,79~81,114~115,163
    K:A:200 11~12,14,115
    K:A:231 86,107~108
    NA:A:201 20,71
    NA:A:202 25,67~69
    NA:A:204 11~12
    NA:A:210 80,113,163~164
    NA:A:215 172~173
    NA:A:216 122~123
    NA:A:220 121~122
    NA:A:223 92~93
    NA:A:225 69~70,130~131
    1PE:A:250 142,159~160
    1PE:A:251 141,160~161
    348 3dim:A
    (2.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    CS:A:200 11~12,14,115
    CS:A:250 141~142,160
    NA:A:201 20,71
    NA:A:203 124~125
    NA:A:204 11~12
    NA:A:207 146~147
    NA:A:208 172~173
    LYS:A:175 11~12,79~80,114~115,163
    349 3dio:X
    (2.4Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:X:200 11~12,14,115
    NA:X:201 20,71
    NA:X:202 25,67~69
    NA:X:203 11~12
    NA:X:205 80,113,163~164
    NA:X:207 92~93
    NA:X:208 168~169
    NA:X:212 68~69
    NA:X:213 69~70,130~131
    NA:X:214 15~16,82~83
    IRI:X:250 1,172~173
    IRI:X:251 109~110
    IRI:X:252 123~125
    IRI:X:253 55~57
    IRI:X:254 83~84,109
    IRI:X:255 13,15,117,131
    IRI:X:257 149~150
    IRI:X:258 113~115
    IRI:X:259 124~125,127
    IRI:X:260 157~158
    IRI:X:261 26~27
    IRI:X:262 40,52~53
    IRI:X:263 91~92,98
    IRI:X:264 8~9
    IRI:X:265 140,142,159~160
    LYS:X:175 11~12,80~81,114~115,163
    1PE:X:280 7,170
    350 3diq:A
    (2.7Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:A:200 11~12,14,115
    NA:A:202 10~12
    NA:A:206 20,71
    NA:A:207 67~69
    NA:A:209 146~147
    HRG:A:175 11~12,80~81,114~115,163
    351 3dir:A
    (2.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:A:200 11~12,14,115
    NA:A:203 20,71
    NA:A:204 25,67~69
    NA:A:205 10~12
    NA:A:206 145~147
    NA:A:207 2,172~173
    NA:A:211 152~154
    IEL:A:175 11~12,80~81,114~115,163
    352 3dis:A
    (3.1Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    NA:A:201 20,71
    NA:A:202 67~69
    NA:A:206 48~49
    NA:A:207 84~85,109
    353 3dix:A
    (2.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:A:200 11~12,14,115
    NA:A:201 20,71
    NA:A:202 145~147
    NA:A:203 67~69
    LYS:A:175 11~12,80~81,114~115,163
    354 3diy:A
    (2.71Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:A:200 11~12,14,115
    NA:A:201 20,71
    NA:A:202 67~69
    NA:A:203 72~73
    NA:A:205 11~12
    NA:A:207 80,113,163~164
    LYS:A:175 11~12,80~81,114~115,163
    355 3diz:A
    (2.85Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:A:200 11~12,14,115
    NA:A:201 20,71
    NA:A:202 67~69
    NA:A:205 15~16
    NA:A:211 10,142,166~167
    NA:A:212 152~153
    LYS:A:175 11~12,79~80,114~115,163
    356 3dj0:A
    (2.5Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    K:A:200 11~12,14,115
    NA:A:201 20,71
    NA:A:202 25,67~69
    NA:A:204 11~12
    NA:A:210 80,113,164
    NA:A:213 24~25
    NA:A:215 121~122
    NA:A:216 123~125
    OLZ:A:175 11~12,80~81,114~115,163
    357 3dj2:A
    (2.5Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    NA:A:201 145~147
    NA:A:202 20,71
    NA:A:204 11~12
    LYS:A:175 11~12,80~81,114~115,163
    TL:A:250 80,113,164
    TL:A:251 115~116
    TL:A:253 43~45
    TL:A:254 82~83
    TL:A:255 122~123
    TL:A:256 141~142,160~161
    TL:A:257 171~173
    TL:A:258 67~69
    TL:A:259 11~12,14
    358 3ds7:A
    (1.85Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080E322 RF00167 synthetic
    construct
    32630    		 19007790 Assembly1
    ACT:A:96 32~33,38~39,66
    NCO:A:101 66~67
    NCO:A:102 38,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    GNG:A:120 21~22,50~52,74~76
    359 3ds7:B
    (1.85Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080E322 RF00167 synthetic
    construct
    32630    		 19007790 Assembly2
    ACT:B:296 232~233,238~239
    NCO:B:301 266~267
    NCO:B:302 238,256
    NCO:B:303 239,256,269
    NCO:B:304 230~232,266
    NCO:B:305 237~238
    NCO:B:306 226~227,268
    GNG:B:320 221~222,251~252,274~276
    360 3e5c:A
    (2.25Å)
    		 53 EC:2.5.1.6 methionine adenosyltransferase
    GO:0004478 (F) methionine adenosyltran...
    GO:0006446 (P) regulation of translati...    		 URS000080DEC9 RF01767 synthetic
    construct
    32630    		 18806797 Assembly1
    SR:A:208 34,36
    SR:A:213 14~15
    SAM:A:216 7,31,36~38,47~48
    361 3e5e:A
    (2.9Å)
    		 53 EC:2.5.1.6 methionine adenosyltransferase
    GO:0004478 (F) methionine adenosyltran...
    GO:0006446 (P) regulation of translati...    		 URS000080DEC9 RF01767 synthetic
    construct
    32630    		 18806797 Assembly1
    SAH:A:220 7,37~38,47~48
    362 3e5f:A
    (2.7Å)
    		 53 EC:2.5.1.6 methionine adenosyltransferase
    GO:0004478 (F) methionine adenosyltran...
    GO:0006446 (P) regulation of translati...    		 URS000080DEC9 RF01767 synthetic
    construct
    32630    		 18806797 Assembly1
    SR:A:208 34,36
    EEM:A:216 7,30~31,36~38,47~48
    363 3eog:A
    (3.391Å)
    		 388 GO:0000373 (P) Group II intron splicing URS000080DD31 RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 18953333 Assembly1
    rna:B:1~6 106,181~184,223,359,374~375
    MG:A:413 119,239
    MG:A:414 375,377
    MG:A:415 358~359,377
    MG:A:417 110~111
    MG:A:423 66~67
    MG:A:424 116~117
    MG:A:426 154~156
    MG:A:437 358~359,377
    MG:A:440 4,375~376
    MG:A:443 67~68
    K:A:444 79~80
    K:A:445 86~88,96~97
    K:A:446 97~98
    K:A:449 273,275
    K:A:450 364~365
    K:A:451 3~5,376
    K:A:453 333~336
    364 3eoh:A
    (3.125Å)
    		 381 GO:0000373 (P) Group II intron splicing URS000080DD31 RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 18953333 Assembly1
    rna:B:1~6 106,181~184,223,358~359,374
    MG:A:413 119,239
    MG:A:414 358~359,377
    MG:A:416 110~111
    MG:A:422 66~67
    MG:A:423 116~117
    MG:A:425 154~156
    MG:A:430 135~136
    MG:A:434 286~287
    MG:A:435 355~356
    MG:A:436 358~359,377
    MG:A:439 4,107,375~376
    MG:A:440 320~321
    MG:A:442 67~68
    MG:B:7 375,377
    K:A:443 79~80
    K:A:444 86~88,95~97
    K:A:445 97~98
    K:A:448 273,275
    K:A:449 364~365
    K:A:450 3~5,376
    365 3ep2:Y
    (9.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DD6E RF00005 Escherichia
    coli
    K-12
    83333    		 19020518
    366 3eph:E
    (2.95Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:A:13~421 9,20,22,26~45
    367 3eph:F
    (2.95Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:B:13~421 20,26~44
    368 3epj:E
    (3.1Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:A:13~421 20,22,26~44,46
    369 3epj:F
    (3.1Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:B:13~421 26~44
    MG:F:74 36~37
    370 3epk:E
    (3.2Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:A:13~421 9,20,22,26~44
    371 3epk:F
    (3.2Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:B:13~421 9,20,26~44
    372 3epl:E
    (3.6Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:A:13~421 20,26~46
    373 3epl:F
    (3.6Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DDE1 RF00005 Saccharomyces
    cerevisiae
    4932    		 18852462 Assembly1
    protein:B:13~421 26,28~45
    374 3eq3:Y
    (9.0Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DD6E RF00005 Escherichia
    coli
    K-12
    83333    		 19020518
    375 3eq4:Y
    (12.0Å)
    		 85 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE10 RF00005 Escherichia
    coli
    K-12
    83333    		 19020518
    376 3fo4:A
    (1.9Å)
    		 63 GO:0009113 (P) purine nucleobase biosy... URS000080E134 RF00167 Bacillus
    subtilis
    1423    		 19523903 Assembly1
    6GU:A:91 21~22,47,51~52,74~75
    ACT:A:96 32~33,38~39
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:107 41,53~54
    NCO:A:108 47,50~51
    NCO:A:109 24,71
    NCO:A:111 32~33
    377 3fo6:A
    (1.9Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DD54 RF00167 Bacillus
    subtilis
    1423    		 19523903 Assembly1
    6GO:A:91 21~22,47,51~52,74~75
    ACT:A:96 32~33,38~39
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:107 41,53~54
    NCO:A:108 46~47
    NCO:A:109 24,71
    378 3foz:C
    (2.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DF41 RF00005 Escherichia
    coli
    562    		 19158097 Assembly1
    protein:A:7~311 26~41
    protein:B:9~311 70~72
    CA:C:76 58~59
    CA:C:77 17,19
    CA:C:78 7~8,14
    379 3foz:D
    (2.5Å)
    		 69 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E12B RF00005 Escherichia
    coli
    562    		 19158097 Assembly1
    protein:B:9~311 25~41
    CA:D:1 22,45
    CA:D:75 17,19
    CA:D:77 44~45
    CA:D:80 71~72
    CA:D:81 7~8,14
    380 3fu2:A
    (2.85Å)
    		 32 GO:0008616 (P) queuosine biosynthetic ... URS000080E020 RF00522 synthetic
    construct
    32630    		 19234468 Assembly1
    PRF:A:101 5,11~12,17~18,30
    CA:A:901 7,9
    381 3fu2:B
    (2.85Å)
    		 33 GO:0008616 (P) queuosine biosynthetic ... URS000080E020 RF00522 synthetic
    construct
    32630    		 19234468 Assembly2
    PRF:B:101 5,11~12,17~18,30
    CA:B:903 7,9
    382 3fu2:C
    (2.85Å)
    		 32 GO:0008616 (P) queuosine biosynthetic ... URS000080E020 RF00522 synthetic
    construct
    32630    		 19234468 Assembly3
    PRF:C:101 5,11~12,17~18,30
    CA:C:904 7,9
    383 3g4m:A
    (2.4Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DDA1 RF00167 Bacillus
    subtilis
    1423    		 19523903 Assembly1
    2BP:A:91 21~22,47,51~52,74~75
    ACT:A:96 32~33,38,66
    NCO:A:101 66~67
    NCO:A:102 38~39,56
    NCO:A:103 39,55~56,69
    NCO:A:104 30~32,66
    NCO:A:105 37~38
    NCO:A:107 53~54
    NCO:A:110 21~22
    NCO:A:112 72~73
    384 3g78:A
    (2.8Å)
    		 389 GO:0000373 (P) Group II intron splicing URS000080DD31 RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 20823550
    18388288
    18953333    		 Assembly1
    rna:Z:1~9 106,181~186,223,359,374,377
    MG:A:413 287,380
    MG:A:414 3~4
    MG:A:423 360,374
    MG:A:435 119,239
    MG:A:439 355~356
    MG:A:443 66~67
    MG:A:445 181,223
    MG:A:452 275~276
    MG:A:455 60,198
    MG:Z:10 375,377
    MG:Z:11 358~359,377
    K:A:461 4,106~107,375~376
    K:A:462 65~68
    K:A:463 115~117
    K:A:464 274~275
    K:A:465 25,27~28
    K:A:466 251~252
    K:A:467 184~185
    K:A:468 333~335
    K:A:469 263~265
    K:A:470 297,319~321
    K:A:471 283~284
    K:A:472 192~194
    K:A:474 86~88,95~97
    K:A:475 3~5,376
    K:A:476 79~80,103
    K:A:477 32~34
    K:A:478 228~229
    K:A:480 288,358~359,377
    K:A:481 330~332
    K:A:482 348~351
    K:A:483 120~121
    K:A:484 153~155
    K:A:485 88~90
    K:A:486 56,58
    385 3g8s:P
    (3.1Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 19228039 Assembly1
    protein:A:7~96 13,17B,17C,17D,17E,17F,17G,17H
    ,17L
    rna:E:-1~11 12,23~30,33,44~45,52~57,59,111
    ~112
    MG:P:2 29~30
    386 3g8s:Q
    (3.1Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 19228039 Assembly2
    protein:B:5~98 13~14,17B,17C,17D,17E,17F,17G,
    17H,17K,17L,110
    rna:F:-1~11 12,23~30,32~33,44~45,50,52~59,
    111~112
    MG:Q:3 28~30
    387 3g8s:R
    (3.1Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 19228039 Assembly3
    protein:C:7~96 12~13,17B,17C,17D,17E,17F,17G,
    17H,17K,17L,110
    rna:G:-1~11 12,23~30,32~33,50,52~59,111~11
    2
    MG:R:6 46~47
    MG:R:7 29~30
    388 3g8s:S
    (3.1Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 19228039 Assembly4
    protein:D:7~96 13,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    rna:H:-1~11 12,23~30,32~33,52~57,59,111~11
    2
    MG:S:9 29~30
    389 3g8t:P
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly1
    protein:A:7~96 17B,17C,17D,17E,17F,17G,17L
    rna:E:-1~11 12,23~28,30,32~33,44,52~57,59,
    111~112
    GLP:E:5001 42~43,57~58
    MG:P:6 18~19
    390 3g8t:Q
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly2
    protein:B:7~96 13,17B,17C,17E,17F,17G,17L,110
    rna:F:-1~11 12,23~30,32~33,44,50,52~57,111
    ~112
    GLP:Q:5002 42~43,57~58
    MG:Q:10 47~48
    391 3g8t:R
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly3
    protein:C:7~96 13~14,17B,17C,17D,17E,17F,17G,
    17H,17L
    rna:G:-1~11 12,23~30,32~33,44,50,52~58,111
    ~112
    GLP:R:5003 43,57
    392 3g8t:S
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly4
    protein:D:7~94 14,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    rna:H:-1~11 12,23~30,32~33,44,50,52~57,111
    ~112
    GLP:H:5004 42~43,57
    393 3g96:P
    (3.01Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly1
    protein:A:7~96 17B,17C,17D,17E,17F,17G,17H,17
    L
    rna:E:-1~11 12,23~30,32~33,44,52~58,111~11
    2
    394 3g96:Q
    (3.01Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly2
    protein:B:7~96 13,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    rna:F:-1~11 12,23~30,32~33,50,52~59,111~11
    2
    6MN:F:12 42~43,57~58
    395 3g96:R
    (3.01Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly3
    protein:C:7~96 12,17B,17C,17D,17E,17F,17G,17H
    ,17K,17L
    rna:G:-1~11 12,23~30,32~33,50,52~59,111~11
    2
    396 3g96:S
    (3.01Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly4
    protein:D:7~96 17B,17C,17D,17E,17F,17G,17H,17
    L
    rna:H:-1~11 12,23~30,32~33,44,50,52~57,59,
    111~112
    397 3g9c:P
    (2.9Å)
    		 140 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly1
    protein:A:7~96 17B,17C,17D,17E,17F,17G,17H,17
    L
    rna:E:1~11 12,23~30,50,52~57,111~112
    GLP:E:5001 42~43,57~58
    MG:P:1 28~29
    398 3g9c:Q
    (2.9Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly2
    protein:B:7~96 12~13,17B,17C,17D,17E,17F,17G,
    17H,17K,17L,110
    rna:F:1~11 12,23~30,50,52~57,111~112
    MG:Q:2 29~30
    399 3g9c:R
    (2.9Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly3
    protein:C:7~96 17B,17C,17D,17E,17F,17G,17H,17
    K,17L
    rna:G:1~11 12,23~30,50,52~57,111~112
    MG:R:3 28~29
    400 3g9c:S
    (2.9Å)
    		 140 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly4
    protein:D:7~96 14,17B,17C,17E,17F,17G,17H,17L
    rna:H:1~11 12,23~30,50,52~57,111~112
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 > >>
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.