| # | PDB (Resolution) |
Length | EC number & GO term |
RNAcentral | Rfam | Taxon | PubMed | ATtRACT motif |
Ligand & binding nucleotides |
|---|---|---|---|---|---|---|---|---|---|
| 3901 |
8ro1:5 (3.0Å) |
111 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00029EB37E | RF00020 | Caenorhabditis elegans 6239 |
38925148 | Assembly1 rna:6:1~101 45~46 protein:A:17~2015 11~12,14,17,19,25~33,41~45,47~ 48,51~52,55~56,58~63,67~68 protein:C:64~961 21,23 protein:N:6~147 70~72 protein:P:1~230 35,55~56 protein:T:31~486 35~36,54 protein:a:1~81 95~96,116~117 protein:b:2~118 81~83,97~98 protein:c:2~81 97~100,113~114 protein:d:13~118 92~93,99~100,102~103 protein:e:11~90 94~95,101,120 protein:f:5~76 93~94,99~102 protein:g:1~77 95~96,117 |
|
| 3902 |
8ro1:6 (3.0Å) |
101 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS00004B9C91 | RF00026 | Caenorhabditis elegans 6239 |
38925148 | Assembly1 rna:2:1~186 42,45~51,77,82~90 rna:5:3~121 61~62,64~65 rna:IN:1~51 24~25,39~40 protein:A:17~2015 15,50~52,56~57,59~65,67 protein:DX:51~732 94~101 protein:J:32~619 55,72~73,78~79,81 protein:L:6~735 29,39~46,55,73,75 protein:L2:75~454 36~37,66 protein:M:19~233 75,80~82,90,92 protein:N:6~147 1~2,13~19,23 protein:O:16~402 18,20~25 protein:P:1~230 52~54,63,73~75 protein:R:1~313 43,54~55 protein:W:54~566 1,17,35~37 MG:6:201 69~70 MG:6:203 67,69 MG:6:204 50,66 MG:6:205 43,47 MG:6:206 48~49,69 |
|
| 3903 |
8ro2:2 (3.5Å) |
39 | GO:0045131 (F) pre-mRNA branch point b... GO:0000348 (P) mRNA branch site recogn... GO:0005686 (C) U2 snRNP |
URS00003EE995 | RF00004 | Homo sapiens 9606 |
38925148 |  M068_0.6 |
Assembly1 rna:6:1~97 1,3~11,16~17,19~22,25~28 protein:A:25~2015 13,15~24,26,29 protein:L:6~801 24,28 protein:L2:54~894 33~34 |
| 3904 |
8ro2:5 (3.5Å) |
92 | GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005682 (C) U5 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS0000118C49 | RF00020 | Homo sapiens 9606 |
38925148 |  M150_0.6  42  M025_0.6  M075_0.6  185  s67  M158_0.6 |
Assembly1 rna:6:1~97 42~43 protein:a:1~83 90,111 protein:c:1~81 92,94 protein:d:18~113 87,93~96,98~99 protein:e:14~92 88,95,114~115 protein:f:5~76 87~88,93~96 protein:A:25~2015 12~15,17,19,23,25~30,36,38~39, 44~50,54~59,64~65 protein:P:36~231 51~53 protein:T:10~500 33,51 protein:b:6~117 91~92,107 |
| 3905 |
8ro2:6 (3.5Å) |
97 | GO:0030621 (F) U4 snRNA binding GO:0000244 (P) spliceosomal tri-snRNP ... GO:0000353 (P) formation of quadruple ... GO:0005688 (C) U6 snRNP GO:0046540 (C) U4/U6 x U5 tri-snRNP co... |
URS000035C796 | RF00026 | Homo sapiens 9606 |
38925148 |  1334  1124  s59  M021_0.6 |
Assembly1 rna:2:1~39 47,49~56,80,82~83,87~95,97 rna:5:9~115 67,69~70 rna:IN:1~154 30,35 protein:N:1~143 1~2,19~24,28 protein:O:15~302 23,25,27~29 protein:W:70~227 15,17,21~22,30 protein:A:25~2015 20,37~38,51~53,55~56,63~66,68~ 70,72 protein:L:6~801 44~49,60,78~79 protein:L2:54~894 40,45 |
| 3906 |
8rqk:U (2.65Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000035EE7E | RF00005 | Homo sapiens 9606 |
N/A |  124  M161_0.6 |
Assembly1 protein:I:2~795 19~20,22~24,33,35,39~42 protein:K:365~463 18,55~56 protein:Y:3~631 29~35,37 MG:U:101 8~9 MG:U:102 35~36 |
| 3907 |
8rr1:T (2.93Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000305491D | RF00005 | Homo sapiens 9606 |
39747487 |  s3  1003  533  503  1147 |
Assembly1 protein:C:7~261 28,30 protein:E:54~792 1~4,49,55~56,63,65~69,89 protein:F:92~385 8~12,20,24~25,28~33,40~44,46~5 0,52,59~62 |
| 3908 |
8rr3:T (3.4Å) |
81 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000305492D | RF00005 | Homo sapiens 9606 |
39747487 |  958  M035_0.6  906  853 |
Assembly1 protein:E:54~792 2~3,19,53~55,62,64,75,95~96 protein:F:92~385 8~12,22,27,29,32,36~41,44~46,4 8~56,58,65,67~68 |
| 3909 |
8rr4:T (3.2Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000305491D | RF00005 | Homo sapiens 9606 |
39747487 | s3 1003 533 503 1147 |
Assembly1 protein:C:7~261 28,30 protein:E:54~792 1~3,49~50,55~56,63,65~69,89 protein:F:92~385 8~12,20,24~25,28~33,40~44,46~4 8,50,52,59~62 |
| 3910 |
8rri:Ax (2.4Å) |
70 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00023359E1 | RF00005 | Homo sapiens 9606 |
40312422 |  1285  1146  M043_0.6  1002 |
Assembly1 protein:8:58~203 10~11,45~46,49~50 protein:AG:53~396 33~35 rna:AA:649~1602 29~32,34,38~41 rna:A:1671~3230 12~13,24~25,74~76 rna:Az:0~31 34~37 |
| 3911 |
8ruh:A (4.55Å) |
390 | GO:0000373 (P) Group II intron splicing | URS00029EB33A | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 rna:B:-2~0 181,183~184,374~375 MG:A:401 358~359,377 MG:A:402 385~386 MG:A:410 119,239 MG:A:411 186~187 MG:A:413 135~136 MG:A:414 66~67 MG:A:420 67~68 MG:A:421 154~155 MG:A:429 375,377 K:A:425 265~266 K:A:430 4,107,375~376 K:A:431 275,277 K:A:432 27~29 K:A:433 79~80 K:A:434 263~264 K:A:435 86~88,95~97 K:A:436 4~5,376 K:A:437 32~34 K:A:438 288,358~359,377 K:A:439 332,348 K:A:441 319~321 K:A:442 12,14~15,255~256 K:A:443 269~271 K:A:444 273,275 K:A:446 48,58~59 EPE:A:447 242,244 EPE:A:448 97~98 |
|
| 3912 |
8rui:A (3.31Å) |
390 | GO:0000373 (P) Group II intron splicing | URS00029EB33A | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 MG:A:401 375,377 MG:A:403 358~359,377 MG:A:405 360,374 MG:A:411 66~67 MG:A:415 67~68 MG:A:416 154~156 MG:A:419 355~356 MG:A:436 116~117 K:A:420 14~15,255~256 K:A:421 268~270 K:A:422 273~275 K:A:423 25,28 K:A:424 4~5,106~107,375~376 K:A:425 273~275 K:A:426 86~87,95~97 K:A:427 2~5,376 K:A:428 32~34 K:A:429 288,358~359,377 K:A:430 331~332,348 K:A:431 90,92 K:A:432 9~10 K:A:433 79~80,103 K:A:434 333~336 VTE:A:435 2,358~359,377 |
|
| 3913 |
8ruj:A (3.12Å) |
390 | GO:0000373 (P) Group II intron splicing | URS00029EB33A | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 VTR:A:401 2,181,359,375,377 MG:A:402 375,377 MG:A:403 358~359,377 MG:A:405 360,374 MG:A:406 324~325 MG:A:409 371~372 MG:A:411 174,239 MG:A:413 135~136 MG:A:414 66~67 MG:A:417 67~68 MG:A:418 154~155 K:A:423 266~267 K:A:424 14~15,256 K:A:425 268~270 K:A:426 273~275 K:A:427 9~10 K:A:428 275,277 K:A:429 25,28 K:A:430 263~264 K:A:431 86~87,95~97 K:A:432 2~5,376 K:A:433 79~80 K:A:434 32~34 K:A:435 288,358~359,377 K:A:436 331~332 K:A:438 193~195 K:A:439 297,319~321 K:A:440 52,203 |
|
| 3914 |
8ruk:A (4.81Å) |
388 | GO:0000373 (P) Group II intron splicing | URS000080DF32 | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 VTR:A:401 358,375,377 MG:A:406 66~67 MG:A:408 67~68 MG:A:410 375,377 MG:A:411 358~359,377 NA:A:412 320~321 NA:A:414 268~270 NA:A:415 331,348 |
|
| 3915 |
8rul:A (3.62Å) |
393 | GO:0000373 (P) Group II intron splicing | URS000080DF32 | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 EPE:A:401 80,82,96~98 EPE:A:402 88~90,92 MG:A:403 154~155 MG:A:404 287~288,321 MG:A:406 324~325 MG:A:409 371~372 MG:A:410 66~67 MG:A:414 67~68 MG:A:418 141~142 MG:A:419 136,138 MG:A:420 105,107 MG:A:423 116~117 MG:A:429 268~270 MG:A:437 111~112 MG:A:439 349~350 MG:A:445 119,239 MG:A:452 375,377 MG:A:454 193~194 MG:A:456 358~359,377 |
|
| 3916 |
8rum:A (3.62Å) |
393 | GO:0000373 (P) Group II intron splicing | URS000080DF32 | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 VTE:A:401 2,181,223,377 MG:A:402 3~4 MG:A:403 324~325 MG:A:405 371~372 MG:A:406 66~67 MG:A:410 67~68 MG:A:416 135~136 MG:A:421 375,377 MG:A:422 358~359,377 MG:A:423 360,374 MG:A:428 268~269 MG:A:429 183~184 MG:A:431 349~350 MG:A:432 -2,178~179 MG:A:433 331~332 MG:A:435 -1,178,184 |
|
| 3917 |
8run:A (3.73Å) |
393 | GO:0000373 (P) Group II intron splicing | URS000080DF32 | RF02001 RF01998 |
Oceanobacillus iheyensis 182710 |
38898052 | Assembly1 EPE:A:401 88~90,92 EPE:A:402 82,96~98 VTR:A:403 359,375,377 MG:A:405 287~288 MG:A:406 105,107 MG:A:408 66~67 MG:A:411 67~68 MG:A:416 358~359,377 MG:A:417 375,377 MG:A:418 116~117 |
|
| 3918 |
8rw1:1 (3.35Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 29~32,34,38~42 rna:3:15~40 35~37 protein:Q:3~143 32~33,35 protein:j:3~270 2~4,18~19,23~24,39~41,54,56~57 ,72 protein:k:58~527 1~2,73~76 |
|
| 3919 |
8rxh:S2 (2.93Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E264 | RF00005 | Leishmania major strain Friedlin 347515 |
38722744 | Assembly1 rna:L2:2~1526 37~38,51~52,63,72,74~76 rna:S1:1~2203 34~37 rna:S5:1~12 34~37 protein:Sa:2~106 39~41 protein:Se:4~64 36~37 |
|
| 3920 |
8rxh:S3 (2.93Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Leishmania major strain Friedlin 347515 |
38722744 | Assembly1 rna:L2:2~1526 2,12~13,24~25,74~76 rna:S1:1~2203 30~32,34,38,40~41 rna:S5:1~12 34~37 protein:SL:6~149 32~33,35 protein:Sa:2~106 28,42 |
|
| 3921 |
8rxh:S4 (2.93Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E264 | RF00005 | Leishmania major strain Friedlin 347515 |
38722744 | Assembly1 rna:L2:2~1526 3~4,71~72,75~76 protein:SH:2~190 31~32,41 |
|
| 3922 |
8rxx:S2 (2.97Å) |
12 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E264 | RF00005 | Leishmania major strain Friedlin 347515 |
38722744 | Assembly1 rna:S1:1~2203 34~37 rna:S5:1~11 34~37 |
|
| 3923 |
8rxx:S3 (2.97Å) |
71 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00001BBAFC | RF00005 | Leishmania major strain Friedlin 347515 |
38722744 | Assembly1 rna:L2:2~1526 2~3,11~13,24~25,73~76 rna:S1:1~2203 30~32,34,38,40~41 rna:S5:1~11 34~37 protein:SL:6~149 33,35 |
|
| 3924 |
8rxx:S4 (2.97Å) |
66 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080E264 | RF00005 | Leishmania major strain Friedlin 347515 |
38722744 | Assembly1 rna:L2:2~1526 3~4,70~72,75~76 rna:S1:1~2203 31,38 protein:Lp:2~98 75~76 |
|
| 3925 |
8s1p:a (1.96Å) |
69 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002F180C | RF00005 | Bacillus subtilis subsp. subtilis str. 168 224308 |
38811035 | Assembly1 rna:A:3~2925 74~76 protein:F:2~179 20,56 protein:V:2~256 14~15 MG:a:101 75~76 |
|
| 3926 |
8s1u:a (3.4Å) |
69 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002F180C | RF00005 | Bacillus subtilis subsp. subtilis str. 168 224308 |
38811035 | Assembly1 protein:F:2~179 20,56~57 protein:V:2~256 14,24 rna:A:3 74~76 |
|
| 3927 |
8s1u:c (3.4Å) |
66 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002F180C | RF00005 | Bacillus subtilis subsp. subtilis str. 168 224308 |
38811035 | Assembly1 protein:H:1~570 20~21,39 |
|
| 3928 |
8s8d:1 (3.45Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 29~32,34,38~42 rna:3:15~40 35~37 protein:Q:3~143 32~33,35 protein:j:3~270 3,16,18,23~24,54,56~57,72 protein:k:58~527 74~76 |
|
| 3929 |
8s8e:1 (3.85Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 30~31,34,38,40~42 rna:3:15~40 35~37 protein:Q:3~143 32~35 protein:j:3~270 2~4,18~19,23,39~41,54,56~57,72 protein:k:58~527 1,73~76 |
|
| 3930 |
8s8f:1 (3.95Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 30~31,34,38,40,42 rna:3:15~40 34~37 protein:Q:3~143 33,35 protein:j:3~265 18~19,54~58,72~73 protein:k:98~519 73~76 protein:m:23~108 12,27 |
|
| 3931 |
8s8g:1 (4.0Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 29~31,34,38~42 rna:3:15~40 34~37 protein:Q:3~143 32~33,35 protein:j:3~270 2~4,18~19,40~41,54,56,72 protein:k:58~527 1,74~76 protein:l:127~270 67~68 |
|
| 3932 |
8s8h:1 (4.0Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 30~31,34,38,40~42 rna:3:15~40 35~37 protein:Q:3~143 33,35 protein:j:3~270 18~19,23~24,40~41,54~56 protein:k:58~527 73~76 protein:l:127~270 1,10,26~27,68 |
|
| 3933 |
8s8i:1 (4.3Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 30~31,34,38,40~42 rna:3:15~40 34~37 protein:Q:3~143 32~33,35 protein:j:3~270 3~4,18~19,41,54~56 protein:k:58~527 1,74~76 protein:l:127~270 1~2,68 |
|
| 3934 |
8s8j:1 (4.7Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 30~32,34,38,40~42 rna:3:15~40 35~37 protein:Q:3~143 33,35 protein:j:3~270 3,18,23~24,39~42,54~56,72~73 protein:k:58~527 1,74~76 |
|
| 3935 |
8s8k:1 (4.0Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00002CB170 | RF00005 | Saccharomyces cerevisiae S288C 559292 |
39193907 | Assembly1 rna:2:1~1798 29~31,34,40~42 rna:3:26~31 36~37 protein:Q:3~143 32~33,35 protein:j:3~270 3,18~19,24,39~41,56,72 protein:k:58~527 74~76 protein:l:127~270 27~28,74 |
|
| 3936 |
8s95:C (3.1Å) |
146 | GO:0030533 (F) triplet codon-amino aci... GO:0039689 (P) negative stranded viral... |
URS0002681463 | RF00386 RF00005 |
synthetic construct 32630 |
37486760 | ||
| 3937 |
8scb:3 (2.5Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000086855F | RF00005 | Oryctolagus cuniculus 9986 |
38172604 | Assembly1 protein:o:2~104 75~76 protein:FF:18~204 31~32,40~41 rna:2:1~76 35~36 rna:5:1~5069 3~4,70~72,75~76 |
|
| 3938 |
8sch:A |
68 | GO:0005515 (F) protein binding GO:0008595 (P) anterior/posterior axis... GO:0017148 (P) negative regulation of ... |
URS0002681442 | RF00161 | Drosophila melanogaster 7227 |
37427795 | ||
| 3939 |
8sh5:R (2.75Å) |
88 | GO:0019081 (P) viral translation | URS0002681455 | RF02521 | Pea enation mosaic virus 2 193120 |
37548413 | Assembly1 protein:H:4~228 37~42 |
|
| 3940 |
8sp9:C (2.92Å) |
136 | GO:0030533 (F) triplet codon-amino aci... GO:0039689 (P) negative stranded viral... |
URS000268145B | RF00386 RF00005 |
synthetic construct 32630 |
37486760 | ||
| 3941 |
8syl:w (2.9Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
37537169 | Assembly1 rna:a:1~1533 34~37 rna:v:13~24 34~37 rna:A:1~2903 19,37~38,52,56,63,74~76 protein:O:1~136 54~55,57 |
|
| 3942 |
8syl:x (2.9Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
37537169 | Assembly1 rna:a:1~1533 30~32,34,38,40~41 rna:v:13~24 34~37 rna:A:1~2903 11~13,24~25,74~76 protein:i:5~130 33~35 protein:F:2~178 56~57 protein:Y:2~85 2,63 MG:x:102 75~76 |
|
| 3943 |
8syl:y (2.9Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
37537169 | Assembly1 rna:A:1~2903 19,56,71,76 |
|
| 3944 |
8t2r:B (3.1Å) |
545 | GO:0000373 (P) Group II intron splicing | URS0002915678 | RF02001 RF00029 RF01998 |
Agathobacter rectalis 39491 |
37993708 | Assembly1 protein:D:4~425 155,182~183,228~231,414~416,42 9~432,449,468~469,639,642 rna:A:2~8 75,109,184~189,578,639 CA:B:701 579,581 CA:B:702 562,581,640 CA:B:704 4,580 CA:B:705 119~120 CA:B:708 157~158 CA:B:711 559~560 CA:B:712 564,578 NH4:B:714 328,581 |
|
| 3945 |
8t2s:B (3.0Å) |
551 | GO:0000373 (P) Group II intron splicing | URS00029156CC | RF02001 RF00029 RF01998 |
Agathobacter rectalis 39491 |
37993708 | Assembly1 protein:D:4~425 -34~-33,-6~-2,1,155,182~184,18 7,228~231,414~416,429~432,449, 468~469,596~599,634~635 CA:B:701 1,562~563,581,632 CA:B:702 0~1,563,579,581 CA:B:703 559~560 CA:B:706 157~158 CA:B:708 564,578 CA:B:710 4~5,580 |
|
| 3946 |
8t2t:B (3.0Å) |
537 | GO:0000373 (P) Group II intron splicing | URS0002617790 | RF02001 RF00029 RF01998 |
Agathobacter rectalis 39491 |
37993708 | Assembly1 rna:A:1~9 109,184~189,231,563,638 protein:D:5~424 155,181~183,228~231,414~416,42 9~432,449,468~469 MG:B:701 563,581,638 MG:B:704 157~158 MG:B:706 138~139 MG:B:707 559~560 MG:B:708 577~578 NH4:B:710 562,581 |
|
| 3947 |
8t2x:tA (2.46Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0002F12C89 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 protein:BZ:4~105 39~41 protein:AI:2~218 54~56,74 rna:B5:1~1799 34~37 rna:A1:3~3396 25,37~38,52~53,63,74~76 rna:MR:-3~8 34~37 |
|
| 3948 |
8t2x:tP (2.46Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00021ED942 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 protein:BQ:3~143 32~33,35 protein:BZ:4~105 42~43 protein:AI:2~218 1,63,73~74 protein:AJ:6~174 20,56 protein:Ao:2~106 19,56 protein:eI:3~157 16,75 rna:B5:1~1799 30~32,34,38,40~41 rna:A1:3~3396 11~13,24~25,74~76 rna:MR:-3~8 34~37 |
|
| 3949 |
8t2y:tA (2.2Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0002F12C89 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 rna:B5:1~1799 34~37 rna:A1:3~3396 37~38,52~53,63,74~76 rna:MR:-3~8 35~37 protein:AI:2~218 54~55 |
|
| 3950 |
8t2y:tP (2.2Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00021ED942 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 protein:BQ:3~143 32~33,35 protein:AI:2~218 73~75 protein:AJ:6~174 20,56 protein:Ao:2~106 19,56 rna:B5:1~1799 30~32,34,38,40~41 rna:A1:3~3396 2~3,11~13,24~25,74~76 rna:MR:-3~8 34~37 |
|
| 3951 |
8t2z:tA (2.4Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0002F12C89 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 rna:B5:1~1799 34~37 rna:A1:3~3396 37~38,52,63,74~76 rna:MR:-3~8 34~37 protein:AI:2~218 54~55 |
|
| 3952 |
8t2z:tP (2.4Å) |
75 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00021ED942 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 protein:BQ:3~143 33~35 protein:AI:2~218 1,73~75 rna:B5:1~1799 30~32,34,38,40~41 rna:A1:3~3396 2~3,12,25,74~76 rna:MR:-3~8 34~37 |
|
| 3953 |
8t3a:tE (2.86Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Saccharomyces cerevisiae 4932 |
N/A | Assembly1 protein:BQ:3~143 33~34,36 protein:Ao:2~106 76~77 protein:E:1~217 57,62~63 rna:B5:1~1799 31~33,35,38~39,41~42 rna:A1:3~3396 3~4,19~20,57,71~73,76~77 |
|
| 3954 |
8t5d:5 (3.2Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38185325 | Assembly1 rna:B:1~2903 11~12,24~25,74~76 rna:v:2~1540 30~32,34,38~41 rna:x:1~12 34~37 protein:F:1~178 56~57 protein:h:3~129 32~34 |
|
| 3955 |
8t5h:5 (3.3Å) |
77 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38185325 | Assembly1 rna:B:1~2903 11~12,24~25,74~76 rna:v:2~1540 30~32,34,38,40~41 rna:x:1~12 34~37 protein:F:1~178 19,56~57 protein:M:1~136 1,52 protein:h:3~129 32~33 |
|
| 3956 |
8tjq:N (3.4Å) |
433 | GO:0000372 (P) Group I intron splicing | URS0002915699 | RF00028 | synthetic construct 32630 |
37791881 | Assembly1 MG:N:504 340,342~344 MG:N:505 339~340,342 MG:N:507 319~320 MG:N:511 26,43 MG:N:515 27~28,75 MG:N:519 71~72 MG:N:523 328~329 MG:N:527 77~78 MG:N:528 5~6,392 |
|
| 3957 |
8tju:A (3.46Å) |
409 | GO:0000372 (P) Group I intron splicing | URS00029EB35B | RF00028 | synthetic construct 32630 |
37791881 | Assembly1 MG:A:502 30,361 MG:A:504 338,340~342 MG:A:505 337~338,340 MG:A:507 317~318 MG:A:509 302~303 MG:A:511 24,41 MG:A:515 25~26,73 MG:A:519 69~71 MG:A:523 326~327 MG:A:527 75~76 |
|
| 3958 |
8tjv:A (2.99Å) |
409 | GO:0000372 (P) Group I intron splicing | URS0002915687 | RF00028 RF00028 |
synthetic construct 32630 |
37791881 | Assembly1 MG:A:501 6~7 MG:A:502 6~7,406~407 MG:A:503 6~7,407 MG:A:507 45,376 MG:A:509 353,355~357 MG:A:510 352~353,355 MG:A:512 332~333 MG:A:516 39,56 MG:A:520 40~41,88 MG:A:524 84~85 MG:A:528 341~342 MG:A:531 87,89 MG:A:532 90~91 F:A:504 7,406 K:A:505 5~7 |
|
| 3959 |
8tjx:N (2.44Å) |
365 | GO:0000372 (P) Group I intron splicing | URS0002915699 | RF00028 | Tetrahymena 5890 |
37791881 | Assembly1 MG:N:502 32,363 MG:N:504 340,342~344 MG:N:505 339~340,342 MG:N:507 319~320 MG:N:509 304~305 MG:N:511 26,43 MG:N:515 27~28,75 MG:N:519 71~72 MG:N:523 328~329 MG:N:526 74,76 MG:N:527 77~78 |
|
| 3960 |
8toz:A (3.0Å) |
96 | GO:0008616 (P) tRNA queuosine(34) bios... | URS00029EB319 | RF02680 | Faecalibacterium prausnitzii 853 |
39413212 | Assembly1 PRF:A:201 7~8,17~18,84~85 |
|
| 3961 |
8tpu:S7 (4.1Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000035398D | RF00005 | Plasmodium falciparum 3D7 36329 |
40825879 | Assembly1 rna:AA:10~3786 2~3,68~69,73~74 protein:Ai:2~95 73~74 |
|
| 3962 |
8uau:R (5.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00029EB31E | RF00005 | Homo sapiens 9606 |
39068213 |  M325_0.6 |
Assembly1 protein:A:20~447 1~2,19~21,46~47,56~57,65~68,72 ,76 |
| 3963 |
8ud6:1w (2.7Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 19,37~38,55~56,64,74 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 protein:1Q:1~141 53~54 MG:1w:101 32,36 MG:1w:102 62~63 |
|
| 3964 |
8ud6:1x (2.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 2~3,11~13,24~25,74~76 rna:1a:4~1533 30~32,34,38~41 rna:1v:12~24 34~37 protein:1i:2~128 33~35 protein:1m:2~124 28~29 K:1A:3520 75~76 MG:1x:103 20,60 MG:1x:110 75~76 |
|
| 3965 |
8ud6:1y (2.7Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 19,56,71~72,76 protein:1g:2~156 31~32,40~42 MG:1A:3536 75~76 |
|
| 3966 |
8ud6:2w (2.7Å) |
70 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 37~38,55~56,64,74 rna:2a:4~1532 34~37 rna:2v:12~24 34~37 protein:2Q:1~141 53~54 |
|
| 3967 |
8ud6:2x (2.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 2~3,11~13,24~25,74~76 rna:2a:4~1532 30~31,34,38,40~41 rna:2v:12~24 34~37 protein:2G:2~182 56~57 protein:20:2~84 2,64 protein:2i:2~128 32~33,35 protein:2m:3~124 28~29 MG:2A:3765 75~76 MG:2x:106 29~30 K:2x:101 75~76 |
|
| 3968 |
8ud6:2y (2.7Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 19,56,71~72,76 protein:21:2~98 73~74 protein:2g:2~156 31,40~41 MG:2y:101 70~71 |
|
| 3969 |
8ud7:1w (2.55Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 19,37~38,55~56,64,74 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 protein:1Q:1~141 53~54 MG:1w:101 32~33,36 MG:1w:102 62~63 |
|
| 3970 |
8ud7:1x (2.55Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 3,11~13,24~25,74~76 rna:1a:4~1533 29~32,34,38~41 rna:1v:12~24 34~37 protein:1G:2~182 19,56~57 protein:1i:2~128 33~35 protein:1m:2~124 28~29 K:1x:101 75~76 MG:1x:103 20,60 MG:1x:105 50,64 MG:1x:106 54~55,58 MG:1x:111 75~76 |
|
| 3971 |
8ud7:1y (2.55Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 19,56,71~72,76 protein:11:2~98 73~74 protein:1g:2~156 31~32,40~42 MG:1y:101 75~76 |
|
| 3972 |
8ud7:2w (2.55Å) |
69 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 37~38,55~56,64 rna:2a:4~1532 34~37 rna:2v:12~24 34~37 protein:2Q:1~141 53~54 protein:2m:3~124 38,40 MG:2w:103 62~63 |
|
| 3973 |
8ud7:2x (2.55Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 2,11~13,24~25,74~76 rna:2a:4~1532 30~31,34,38,40~41 rna:2v:12~24 34~37 protein:2G:2~182 19,56~57 protein:20:2~84 2,64 protein:2i:2~128 32~35 protein:2m:3~124 28~29 K:2x:101 75~76 MG:2x:106 75~76 |
|
| 3974 |
8ud7:2y (2.55Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 19,56,71~72,76 protein:2g:2~156 31~32,40~42 MG:2y:103 10~11 |
|
| 3975 |
8ud8:1w (2.6Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 19,37~38,56,64,74~76 rna:1a:4~1533 34~37 rna:1v:12~24 34~37 protein:1Q:1~141 53~54 MG:1w:101 33,36 MG:1w:103 52,62~63 |
|
| 3976 |
8ud8:1x (2.6Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 11~13,24~25,74~76 rna:1a:4~1533 29~32,34,38,40~41 rna:1v:12~24 34~37 protein:1G:2~182 19,56~57 protein:10:2~84 2,64 protein:1i:2~128 32~35 protein:1m:2~124 28~29 K:1A:3557 75~76 MG:1A:4042 75~76 MG:1x:104 20,60 MG:1x:105 32,37 MG:1x:107 54~55,58 |
|
| 3977 |
8ud8:1y (2.6Å) |
74 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:1A:6~2897 19,56,71~72,76 protein:11:2~98 74~75 protein:1g:2~156 32~34,40~42 |
|
| 3978 |
8ud8:2w (2.6Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 37~38,55~56,64,74~76 rna:2a:4~1532 34~37 rna:2v:12~24 34~37 protein:2Q:1~141 53~54,63 protein:2m:3~124 38~39 MG:2A:3487 74~75 MG:2w:105 51~52,62~63 MG:2w:106 55,57 |
|
| 3979 |
8ud8:2x (2.6Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000041AF00 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 11~13,24~25,74~76 rna:2a:4~1532 29~32,34,38~41 rna:2v:12~24 34~37 protein:2G:2~182 19,56~57 protein:2i:2~128 32~35 protein:2m:3~124 28~29 K:2A:3459 75~76 MG:2x:107 75~76 |
|
| 3980 |
8ud8:2y (2.6Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00005AA258 | RF00005 | Escherichia coli 562 |
38359125 | Assembly1 rna:2A:6~2897 19,56,71~72,76 protein:2g:2~156 31~32,40~42 MG:2y:103 70~71 |
|
| 3981 |
8up5:T (3.56Å) |
73 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS00021ED95A | RF00005 | Methanocaldococcus jannaschii 2190 |
39639027 | Assembly1 protein:B:356~533 26~27,35 protein:K:0~324 32~33,36~38 protein:C:5~148 1,69,73~76 protein:P:7~80 32~34 |
|
| 3982 |
8upo:A (5.5Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3983 |
8upo:B (5.5Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~37 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3984 |
8upr:A (5.3Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3985 |
8upr:B (5.3Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~38 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3986 |
8upy:C (2.8Å) |
72 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS0000BC466B | RF00005 | Methanosarcina mazei 2209 |
38100361 | ||
| 3987 |
8uql:A (3.2Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3988 |
8uql:B (3.2Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~41 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3989 |
8uqm:A (5.3Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3990 |
8uqm:B (5.3Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~41 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3991 |
8uqp:A (3.8Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3992 |
8uqp:B (3.8Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~40 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3993 |
8ur0:A (3.4Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3994 |
8ur0:B (3.4Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~40 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3995 |
8urh:A (5.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3996 |
8urh:B (5.7Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~43 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3997 |
8uri:A (5.3Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
|
| 3998 |
8uri:B (5.3Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 rna:7:1~43 35,37 rna:D:1~1534 30~32,37~38 rna:a:1~2903 2,13,24,75~76 protein:X:2~117 44~45 |
|
| 3999 |
8urj:G (4.25Å) |
39 | GO:0005515 (F) protein binding GO:0051169 (P) nuclear transport GO:0005634 (C) nucleus |
N/A | RF00036 | Human immunodeficiency virus 1 11676 |
N/A | Assembly1 protein:C:7~1056 129,133,143,146~147 protein:D:8~179 130,134~135 protein:E:11~90 119~122,141,146,148 |
|
| 4000 |
8urx:A (6.6Å) |
76 | GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation |
URS000080DFF5 | RF00005 | Escherichia coli 562 |
39117885 | Assembly1 protein:M:2~152 32~34,40~41 rna:a:1~2903 16~17,19,56,71~72,76 |
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4576 RNAs.
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