SEQ2FUN

FURNA
Download all results in tab-seperated text for 4576 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 36 37 38 39 40 41 42 43 44 45 46 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    4501 9pgi:Ay
    (3.02Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED990 RF00005 Homo
    sapiens
    9606    		 41663403
    1285

    1146

    M043_0.6

    1002    		 Assembly1
    rna:A:1671~3231 75~76
    rna:Ax:1~71 34~35
    protein:z:61~312 15,21~22,60
    protein:AF:35~242 32~34,36,39,41~42
    4502 9pgm:Ay
    (3.18Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED990 RF00005 Homo
    sapiens
    9606    		 41663403
    1285

    1146

    M043_0.6

    1002    		 Assembly1
    rna:A:1671~3231 75~76
    rna:Ax:1~71 34~35
    protein:z:61~312 14~15,21~22,60
    protein:AF:35~242 32~34,36,39~42
    4503 9ps0:Ax
    (3.29Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000268144D RF00005 Homo
    sapiens
    9606    		 41663403
    1285

    1146

    M043_0.6

    1002    		 Assembly1
    rna:A:1671~3231 75~76
    rna:AA:649~1602 29,31~32,34,38~39,41
    rna:Az:-1~32 34~38
    protein:AG:53~396 34~35
    protein:q:25~201 52~57
    4504 9ps7:Ay
    (3.08Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED990 RF00005 Homo
    sapiens
    9606    		 41663403
    1285

    1146

    M043_0.6

    1002    		 Assembly1
    rna:A:1671~3231 75~76
    rna:Ax:1~71 34~35
    protein:z:61~312 14~15,22,60
    protein:AF:35~242 32~34,36,39~42
    4505 9psi:Ay
    (3.12Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00021ED990 RF00005 Homo
    sapiens
    9606    		 41663403
    1285

    1146

    M043_0.6

    1002    		 Assembly1
    rna:A:1671~3231 75~76
    rna:Ax:1~71 34~35
    protein:z:61~312 14~15,21~22,60
    protein:AF:35~242 32~34,36,39~42
    4506 9psm:Ax
    (2.98Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000268144D RF00005 Homo
    sapiens
    9606    		 41663403
    1285

    1146

    M043_0.6

    1002    		 Assembly1
    rna:A:1671~3231 75~76
    rna:Az:-1~32 34~37
    rna:AA:649~1602 30~32,34,38~39,41,43
    protein:q:25~201 53,55~57
    protein:AG:53~396 33~35
    4507 9qax:B
    (3.3Å)
    		 253 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0003964 (F) RNA-directed DNA polyme...
    GO:0000332 (F) template for synthesis ...
    GO:0005515 (F) protein binding
    GO:0044877 (F) protein-containing comp...
    GO:0070182 (F) DNA polymerase binding
    GO:0071987 (F) WD40-repeat domain binding
    GO:0007004 (P) telomere maintenance vi...
    GO:0071456 (P) cellular response to hy...
    GO:2000773 (P) negative regulation of ...
    GO:0000333 (C) telomerase catalytic co...
    GO:0000781 (C) chromosome, telomeric r...
    GO:0005737 (C) cytoplasm
    GO:0015030 (C) Cajal body
    GO:0005697 (C) telomerase holoenzyme c...
    GO:0090661 (C) box H/ACA telomerase RN...    		 URS00004A7003 RF00024 Homo
    sapiens
    9606    		 40638752
    1166

    1303

    707

    1125

    s81

    M061_0.6

    M150_0.6

    156

    M025_0.6

    M075_0.6

    325

    M272_0.6

    s18

    s37

    122

    s99

    800

    58

    1188

    414

    M044_0.6

    1245

    s66

    s65

    M158_0.6    		 Assembly1
    protein:A:4~1132 37~41,43~45,47~50,56~58,61~63,
    73,77,92,104~106,115,140~142,1
    75~177,179~183,186~187,258~263
    ,266~267,283~284,287~292,301,3
    03,305~308,312~315,318
    protein:L:19~99 251,310,315,320~321
    protein:M:36~125 302,316~320
    dna:N:24~30 50~54
    4508 9qay:B
    (3.8Å)
    		 253 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0003964 (F) RNA-directed DNA polyme...
    GO:0000332 (F) template for synthesis ...
    GO:0005515 (F) protein binding
    GO:0044877 (F) protein-containing comp...
    GO:0070182 (F) DNA polymerase binding
    GO:0071987 (F) WD40-repeat domain binding
    GO:0007004 (P) telomere maintenance vi...
    GO:0071456 (P) cellular response to hy...
    GO:2000773 (P) negative regulation of ...
    GO:0000333 (C) telomerase catalytic co...
    GO:0000781 (C) chromosome, telomeric r...
    GO:0005737 (C) cytoplasm
    GO:0015030 (C) Cajal body
    GO:0005697 (C) telomerase holoenzyme c...
    GO:0090661 (C) box H/ACA telomerase RN...    		 URS00004A7003 RF00024 Homo
    sapiens
    9606    		 40638752
    1166

    1303

    707

    1125

    s81

    M061_0.6

    M150_0.6

    156

    M025_0.6

    M075_0.6

    325

    M272_0.6

    s18

    s37

    122

    s99

    800

    58

    1188

    414

    M044_0.6

    1245

    s66

    s65

    M158_0.6    		 Assembly1
    protein:A:4~1132 37~41,43~45,47~50,56,58,61~63,
    73,77,92,104~107,115,140~142,1
    75,177,179~183,186~187,258~263
    ,266~267,283~284,287~292,301,3
    03,305~309,311~315,318
    protein:L:19~99 251,310,315,320~321
    protein:M:36~125 302,316~320
    dna:N:24~30 50~54
    4509 9qaz:B
    (3.6Å)
    		 253 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0003964 (F) RNA-directed DNA polyme...
    GO:0000332 (F) template for synthesis ...
    GO:0005515 (F) protein binding
    GO:0044877 (F) protein-containing comp...
    GO:0070182 (F) DNA polymerase binding
    GO:0071987 (F) WD40-repeat domain binding
    GO:0007004 (P) telomere maintenance vi...
    GO:0071456 (P) cellular response to hy...
    GO:2000773 (P) negative regulation of ...
    GO:0000333 (C) telomerase catalytic co...
    GO:0000781 (C) chromosome, telomeric r...
    GO:0005737 (C) cytoplasm
    GO:0015030 (C) Cajal body
    GO:0005697 (C) telomerase holoenzyme c...
    GO:0090661 (C) box H/ACA telomerase RN...    		 URS00004A7003 RF00024 Homo
    sapiens
    9606    		 40638752
    1166

    1303

    707

    1125

    s81

    M061_0.6

    M150_0.6

    156

    M025_0.6

    M075_0.6

    325

    M272_0.6

    s18

    s37

    122

    s99

    800

    58

    1188

    414

    M044_0.6

    1245

    s66

    s65

    M158_0.6    		 Assembly1
    protein:A:4~1132 37~41,43~45,47~50,56,58,61~63,
    73,77,92,104~106,115,140~142,1
    75~177,179~181,183,186~187,258
    ~263,266~267,283~284,287~292,3
    01,303,305~309,311~315,318
    protein:L:19~99 251,310,315,320~321
    protein:M:36~125 302,316~320
    dna:N:24~30 50~54
    4510 9qb2:B
    (3.0Å)
    		 154 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0007004 (P) telomere maintenance vi...
    GO:0000333 (C) telomerase catalytic co...    		 N/A RF00024 Homo
    sapiens
    9606    		 40638752
    1227

    748

    749

    987

    837

    953

    1075

    42

    s77

    1173

    1215

    1352

    779

    778

    1333

    589

    M151_0.6

    s99

    1178

    78

    901

    1389

    1360

    1385    		 Assembly1
    protein:C:23~421 212~215,353~354,369~370,372~37
    6
    protein:G:43~395 377~379,381~384,392~394,399~40
    1,428~430,432~434,443~444,446~
    450
    protein:I:23~152 405,407~408,411,416~420
    protein:J:1~64 401~402,419
    protein:K:146~522 411~415
    4511 9qb2:b
    (3.0Å)
    		 53 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0007004 (P) telomere maintenance vi...
    GO:0000333 (C) telomerase catalytic co...    		 N/A RF00024 Homo
    sapiens
    9606    		 40638752
    1166

    M050_0.6

    M109_0.6

    s102

    M044_0.6

    938

    979

    886

    s99

    21    		 Assembly1
    protein:C:23~421 328~329
    protein:E:23~152 236~237
    4512 9qb3:B
    (3.9Å)
    		 186 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0007004 (P) telomere maintenance vi...
    GO:0000333 (C) telomerase catalytic co...    		 N/A RF00024 Homo
    sapiens
    9606    		 40638752
    1227

    1166

    886

    748

    749

    987

    837

    953

    1075

    42

    979

    938

    s77

    1173

    1215

    1352

    M109_0.6

    779

    778

    1333

    1178

    M151_0.6

    s99

    589

    78

    901

    M050_0.6

    21

    s102

    M044_0.6

    1389

    1360

    1385    		 Assembly1
    protein:C:23~421 212~215,353~354,369~370,372~37
    6
    protein:G:43~395 377~378,381~384,392~394,399~40
    0,428~430,432~434,443~450
    protein:I:23~152 405,407~408,411,417~420
    protein:J:1~64 401~402,419
    protein:K:146~522 393,412~415
    protein:c:23~421 328~329
    protein:e:23~152 236~237,328
    4513 9qb3:b
    (3.9Å)
    		 186 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0007004 (P) telomere maintenance vi...
    GO:0000333 (C) telomerase catalytic co...    		 N/A RF00024 Homo
    sapiens
    9606    		 40638752
    1227

    1166

    886

    748

    749

    987

    837

    953

    1075

    42

    979

    938

    s77

    1173

    1215

    1352

    M109_0.6

    779

    778

    1333

    1178

    M151_0.6

    s99

    589

    78

    901

    M050_0.6

    21

    s102

    M044_0.6

    1389

    1360

    1385    		 Assembly1
    protein:C:23~421 328~329
    protein:E:23~152 236~237
    protein:c:23~421 212~215,353~354,369~370,372~37
    6
    protein:g:43~395 377~378,381~384,392~394,399~40
    0,428~430,432~434,443~450
    protein:i:23~152 405,407~408,411,417~420
    protein:j:1~64 401~402,419
    protein:k:146~522 393,412~415
    4514 9qeq:a
    (3.5Å)
    		 164 GO:0030627 (F) pre-mRNA 5'-splice site...
    GO:0000395 (P) mRNA 5'-splice site rec...
    GO:0005685 (C) U1 snRNP    		 URS000032B6B6 RF00003 Homo
    sapiens
    9606    		 40595577
    121

    M319_0.6

    1184

    1202

    518

    s52

    509

    1031

    760    		 Assembly1
    rna:P:30~68 1~11
    protein:b:27~212 20~21,27~35,37~38,135~138
    protein:c:6~103 67~71,75
    protein:e:10~114 121~123,125,131~132,135~136
    protein:f:2~75 125~126,132~133
    protein:g:14~90 126,133
    protein:h:4~76 127~128
    protein:i:3~83 118,127~128
    protein:j:6~91 129~130,134,139~140
    protein:k:2~82 47,121,130,132,134~136,138,164
    4515 9qlo:CP
    (2.47Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 41577716
    31588918
    938

    886

    979

    660    		 Assembly1
    rna:CM:802~813 33~36
    rna:L5:1~5069 72~75
    rna:S2:1~1869 29~31,33,37~40
    protein:CR:7~420 26,35,75
    protein:LI:2~214 1,71~72
    protein:LJ:10~178 19,55
    protein:Lo:2~106 18,55
    protein:SQ:5~146 31~32,34
    4516 9qlp:CP
    (2.75Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 41577716
    31588918
    938

    886

    979

    660    		 Assembly1
    rna:CM:802~813 33~36
    rna:L5:1~5069 72~75
    rna:S2:1~1869 29~31,33,37~40
    protein:CR:7~420 26,35
    protein:LI:2~214 1,71~72
    protein:LJ:10~178 19,55
    protein:Lo:2~106 18,55
    protein:SQ:5~146 31~32,34
    4517 9qlq:CP
    (2.57Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 41577716
    31588918
    938

    886

    979

    660    		 Assembly1
    rna:CM:802~813 33~36
    rna:L5:1~5069 72~75
    rna:S2:1~1869 29~31,33,37,39~40
    protein:CR:7~420 26,75
    protein:LI:2~214 1,71~72
    protein:LJ:10~178 19,55
    protein:Lo:2~106 18,55
    protein:SQ:5~146 32,34
    4518 9qqq:Z
    (2.26Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    B
    37762    		 41282059 Assembly1
    rna:A:2~1534 30~32,34,38,40~41
    rna:X:13~18 34~37
    rna:a:1~2901 11~12,24~25,74~76
    protein:I:4~130 33~35
    protein:f:2~178 56~57
    4519 9qsj:Z
    (2.62Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    B
    37762    		 41282059 Assembly1
    rna:A:2~1534 30~32,34,38,40~41
    rna:X:13~23 34~37
    rna:a:1~2901 11~12,24,74~76
    protein:I:4~130 33~35
    protein:f:2~178 56~57
    4520 9qtj:1
    (3.79Å)
    		 461 GO:0000373 (P) Group II intron splicing N/A RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 40905273
    4521 9qu6:A
    (3.2Å)
    		 312 GO:0000373 (P) Group II intron splicing N/A RF02001 Oceanobacillus
    iheyensis
    182710    		 N/A Assembly1
    rna:B:-4~0 181~186,374~375
    MG:A:403 67~68
    MG:A:404 154~155
    K:A:406 269~270
    4522 9qu7:A
    (2.6Å)
    		 297 GO:0000373 (P) Group II intron splicing N/A RF02001 Oceanobacillus
    iheyensis
    182710    		 N/A Assembly1
    rna:B:-4~0 106,181~186,374~375
    MG:A:402 358~359,377
    MG:A:405 119,239
    MG:A:408 66~67
    MG:A:410 67~68
    MG:A:411 154~155
    MG:A:413 375,377
    K:A:414 4,106~107,375~376
    K:A:415 28~29,41
    K:A:416 3~5,376
    K:A:417 288,358~359,377
    K:A:418 319~321
    K:A:419 268~270
    4523 9qwn:D
    (3.6Å)
    		 25 GO:0006398 (P) mRNA 3'-end processing ... N/A RF00032 synthetic
    construct
    32630    		 41484129 Assembly1
    protein:A:116~913 -3~8,20~21
    4524 9rpv:B5
    (2.35Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000057545F RF00005 Homo
    sapiens
    9606    		 41261136
    1334

    1314

    s48

    s49

    s59    		 Assembly1
    rna:A5:33~39 35~38
    rna:M5:1~5069 3,12,25~26,75~77
    rna:S3:1~1869 31~33,35,39~42
    protein:Mo:2~106 20,57
    protein:RP:11~141 30~32,37
    protein:RQ:6~146 33~34,36
    protein:RS:2~149 29~30
    protein:RZ:32~115 43~44
    MG:B5:101 60~61
    4525 9rpv:D4
    (2.35Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Homo
    sapiens
    9606    		 41261136
    1212

    1373    		 Assembly1
    rna:A4:41~54 34~36
    rna:L5:1~5069 37,56,74~76
    rna:S2:1~1869 34~37
    protein:LI:2~214 2,64
    4526 9rvy:E
    (3.0Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 14~17,20~23,28~30,32,34
    protein:C:5~165 6~8,39~40
    4527 9rvy:F
    (3.0Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 6~8,39
    protein:C:5~165 15~17,29~31
    4528 9rvz:E
    (3.2Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 2,14~17,21~23,28~30,32~34
    protein:C:5~167 6~8,39
    4529 9rvz:F
    (3.2Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 6~8,39
    protein:C:5~167 15~17,29~31
    4530 9rw0:E
    (3.4Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 14~17,21~23,28~30
    protein:C:5~816 6~8,39~40
    4531 9rw0:F
    (3.4Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 6~8,39
    protein:C:5~816 15~17,28~31
    4532 9rw1:E
    (3.7Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 14~17,20~23,28~31
    protein:C:5~816 6~8,39
    4533 9rw1:F
    (3.7Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 6~8,39
    protein:C:5~816 15~17,28~31
    4534 9rw2:E
    (3.6Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 15~17,28~31
    protein:C:5~816 6~8,39~40
    4535 9rw2:F
    (3.6Å)
    		 44 GO:0008298 (P) intracellular mRNA loca...
    GO:0051028 (P) mRNA transport    		 N/A RF00207 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 6~8,39
    protein:C:5~816 14~17,29~31
    4536 9rw3:E
    (3.2Å)
    		 43 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 2,13~17,26,32~35,39~40
    protein:C:2~167 5~7,44~46
    4537 9rw3:F
    (3.2Å)
    		 43 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 5~7,44~46
    protein:C:2~167 14~16,32~35
    4538 9rw4:E
    (3.9Å)
    		 43 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:5~816 13~16,32~35,39~40
    protein:C:5~816 5~7,44~45
    4539 9rw4:F
    (3.9Å)
    		 43 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:5~816 5~7,44,46
    protein:C:5~816 14~16,27,32~35,39~40
    4540 9rw5:E
    (4.1Å)
    		 43 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 14~15,32~33,39~40
    protein:C:2~816 5,7,45
    4541 9rw5:F
    (4.1Å)
    		 43 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 5,7,45
    protein:C:2~816 14~15,32~33,39~40
    4542 9rw7:E
    (3.4Å)
    		 50 GO:0008359 (P) regulation of bicoid mR... N/A RF00551 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~167 9~11,48,50
    protein:D:4~816 5,18~21,32~33,37~40,43
    4543 9rw7:F
    (3.4Å)
    		 50 GO:0008359 (P) regulation of bicoid mR... N/A RF00551 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~167 19~21,37~40
    protein:D:4~816 9~11,48,50
    4544 9rw8:E
    (4.4Å)
    		 50 GO:0008359 (P) regulation of bicoid mR... N/A RF00551 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~816 9~11
    protein:D:2~816 20,24,32,37~39
    4545 9rw8:F
    (4.4Å)
    		 50 GO:0008359 (P) regulation of bicoid mR... N/A RF00551 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~816 20,32,37,39
    4546 9rw9:E
    (4.2Å)
    		 50 GO:0008359 (P) regulation of bicoid mR... N/A RF00551 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:D:2~816 18~20,37~38
    4547 9rw9:F
    (4.2Å)
    		 50 GO:0008359 (P) regulation of bicoid mR... N/A RF00551 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~816 20,37
    protein:D:2~816 9,11
    4548 9rwa:E
    (3.9Å)
    		 47 GO:0051028 (P) mRNA transport N/A RF00626 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~167 9~11,44~45
    protein:D:2~816 17~20,28~29,33~37
    4549 9rwa:F
    (3.9Å)
    		 47 GO:0051028 (P) mRNA transport N/A RF00626 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~167 17~20,33~35
    protein:D:2~816 9~11,44~45
    4550 9rwb:E
    (3.4Å)
    		 98 GO:0006403 (P) RNA localization N/A RF00437 Drosophila
    melanogaster
    7227    		 N/A Assembly1
    protein:C:5~167 5~7,44~45,95~98,118~120
    protein:D:3~816 1,13~16,19~21,26~27,32~37,39~4
    0,84~86,129~130
    4551 9s3b:CP
    (2.38Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 41577716
    938

    886

    979

    660    		 Assembly1
    rna:CM:437~448 33~36
    rna:L5:1~5069 12,72~75
    rna:S2:1~1869 29~31,33,37~40
    protein:CR:7~420 26,35,75
    protein:LI:2~214 1,71~72
    protein:LJ:10~178 19,55
    protein:Lo:2~106 18,55
    protein:SQ:5~146 31~32,34
    4552 9s3c:CP
    (2.42Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 41577716
    938

    886

    979

    660    		 Assembly1
    rna:CM:437~448 33~36
    rna:L5:1~5069 12,72~75
    rna:S2:1~1869 29~31,33,37~40
    protein:CR:7~420 26,35
    protein:LI:2~214 1,71~72
    protein:LJ:10~178 19,55
    protein:SQ:5~146 32,34
    4553 9s3d:CP
    (2.32Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000416117 RF00005 Homo
    sapiens
    9606    		 41577716
    938

    886

    979

    660    		 Assembly1
    rna:CM:437~448 33~36
    rna:L5:1~5069 72~75
    rna:S2:1~1869 29~31,33,37~40
    protein:CR:7~420 26,35,75
    protein:LI:2~214 1,71~72
    protein:LJ:10~178 19,55
    protein:Lo:2~106 18,55
    protein:SQ:5~146 31~32,34
    4554 9shy:B
    (3.53Å)
    		 253 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0003964 (F) RNA-directed DNA polyme...
    GO:0000332 (F) template for synthesis ...
    GO:0005515 (F) protein binding
    GO:0044877 (F) protein-containing comp...
    GO:0070182 (F) DNA polymerase binding
    GO:0071987 (F) WD40-repeat domain binding
    GO:0007004 (P) telomere maintenance vi...
    GO:0071456 (P) cellular response to hy...
    GO:2000773 (P) negative regulation of ...
    GO:0000333 (C) telomerase catalytic co...
    GO:0000781 (C) chromosome, telomeric r...
    GO:0005737 (C) cytoplasm
    GO:0015030 (C) Cajal body
    GO:0005697 (C) telomerase holoenzyme c...
    GO:0090661 (C) box H/ACA telomerase RN...    		 URS00004A7003 RF00024 Homo
    sapiens
    9606    		 41565648
    1166

    1303

    707

    1125

    s81

    M061_0.6

    M150_0.6

    156

    M025_0.6

    M075_0.6

    325

    M272_0.6

    s18

    s37

    122

    s99

    800

    58

    1188

    414

    M044_0.6

    1245

    s66

    s65

    M158_0.6    		 Assembly1
    protein:A:4~1132 37,39~40,42,45,48~53,57~63,73~
    77,92,104~106,115~116,140,177,
    179~183,186~187,258~260,262~26
    3,266~267,283~284,287~292,301,
    303,305~309,311~316,318
    protein:L:19~99 245,310,315,320~322
    protein:M:36~125 244,302,316~317,319~320
    dna:N:25~34 50,52~56
    1GC:A:1201 51~52
    4555 9shz:B
    (3.2Å)
    		 253 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0003964 (F) RNA-directed DNA polyme...
    GO:0000332 (F) template for synthesis ...
    GO:0005515 (F) protein binding
    GO:0044877 (F) protein-containing comp...
    GO:0070182 (F) DNA polymerase binding
    GO:0071987 (F) WD40-repeat domain binding
    GO:0007004 (P) telomere maintenance vi...
    GO:0071456 (P) cellular response to hy...
    GO:2000773 (P) negative regulation of ...
    GO:0000333 (C) telomerase catalytic co...
    GO:0000781 (C) chromosome, telomeric r...
    GO:0005737 (C) cytoplasm
    GO:0015030 (C) Cajal body
    GO:0005697 (C) telomerase holoenzyme c...
    GO:0090661 (C) box H/ACA telomerase RN...    		 URS00004A7003 RF00024 Homo
    sapiens
    9606    		 41565648
    1166

    1303

    707

    1125

    s81

    M061_0.6

    M150_0.6

    156

    M025_0.6

    M075_0.6

    325

    M272_0.6

    s18

    s37

    122

    s99

    800

    58

    1188

    414

    M044_0.6

    1245

    s66

    s65

    M158_0.6    		 Assembly1
    protein:L:19~99 113,163,245,251,310~311,315,31
    9~322
    protein:M:36~125 244~245,302,316~318,320
    protein:A:1 39~40,42,44~45,47~51,55~58,61,
    73~74,77,92,104~106,115~116,14
    0~143,145,175,177,179~183,186~
    187,259~260,262,266,283~285,28
    7~292,301~303,305~309,312~316,
    318
    dna:N:20~30 50~55
    4556 9si0:B
    (3.8Å)
    		 253 EC:2.7.7.49 RNA-directed DNA polymerase
    GO:0003720 (F) telomerase activity
    GO:0003964 (F) RNA-directed DNA polyme...
    GO:0000332 (F) template for synthesis ...
    GO:0005515 (F) protein binding
    GO:0044877 (F) protein-containing comp...
    GO:0070182 (F) DNA polymerase binding
    GO:0071987 (F) WD40-repeat domain binding
    GO:0007004 (P) telomere maintenance vi...
    GO:0071456 (P) cellular response to hy...
    GO:2000773 (P) negative regulation of ...
    GO:0000333 (C) telomerase catalytic co...
    GO:0000781 (C) chromosome, telomeric r...
    GO:0005737 (C) cytoplasm
    GO:0015030 (C) Cajal body
    GO:0005697 (C) telomerase holoenzyme c...
    GO:0090661 (C) box H/ACA telomerase RN...    		 URS00004A7003 RF00024 Homo
    sapiens
    9606    		 41565648
    1166

    1303

    707

    1125

    s81

    M061_0.6

    M150_0.6

    156

    M025_0.6

    M075_0.6

    325

    M272_0.6

    s18

    s37

    122

    s99

    800

    58

    1188

    414

    M044_0.6

    1245

    s66

    s65

    M158_0.6    		 Assembly1
    protein:L:19~99 245,315,319~322
    protein:M:36~125 301~302,316~320
    protein:A:4 39~41,45~49,51~54,60,62,73,75,
    77,92,104~106,115~116,126,141~
    142,176~177,179~183,186~187,25
    8~262,266~267,284~285,287~292,
    301,303,305~309,312~316,318
    dna:N:24~33 47~51
    1GC:A:1201 46~47
    4557 9sro:Z
    (2.6Å)
    		 73 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 41282059 Assembly1
    rna:a:1~2901 3~4,70~72,75~76
    rna:A:2~1533 29~32,34,38~41
    rna:X:13~22 34~37
    protein:I:4~130 33~35
    4558 9u47:B
    (3.4Å)
    		 42 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Schizosaccharomyces
    pombe
    4896    		 40841561 Assembly1
    protein:A:62~398 53~59,61,71~74
    4559 9u48:B
    (2.99Å)
    		 49 GO:0030621 (F) U4 snRNA binding
    GO:0000244 (P) spliceosomal tri-snRNP ...
    GO:0000353 (P) formation of quadruple ...
    GO:0005688 (C) U6 snRNP
    GO:0046540 (C) U4/U6 x U5 tri-snRNP co...    		 N/A RF00026 Schizosaccharomyces
    pombe
    4896    		 40841561 Assembly1
    protein:A:56~398 35~39,53~60,69,73~74
    4560 9u5p:R
    (2.96Å)
    		 75 GO:0039689 (P) negative stranded viral... N/A RF00386 rhinovirus
    B14
    12131    		 N/A Assembly1
    protein:A:2~181 48~49,60,62~63,71~72
    protein:O:2~181 46~47,55,64
    4561 9u5q:R
    (3.35Å)
    		 75 GO:0039689 (P) negative stranded viral... N/A RF00386 rhinovirus
    B14
    12131    		 N/A Assembly1
    protein:A:2~180 48~49,60,62~63,71~72
    4562 9u5r:R
    (3.59Å)
    		 75 GO:0039689 (P) negative stranded viral... N/A RF00386 rhinovirus
    B14
    12131    		 N/A Assembly1
    protein:O:2~181 45~47,55~56,64~66
    4563 9v4u:A
    (2.54Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    NPR:A:101 8~9,37~39,64~65
    4564 9v4v:A
    (3.12Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    7PD:A:101 8~9,34,38~39,64~65
    4565 9v4x:A
    (2.92Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    9QC:A:101 8~9,34,38~39,64~65
    4566 9v4y:A
    (2.79Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    ANG:A:101 8~9,34,38~39,64~65
    ANG:A:102 1~2,71
    4567 9v4z:A
    (2.74Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    OXG:A:101 8~9,38~39,64~65
    MG:A:102 7~8,36
    4568 9v50:A
    (3.25Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    A1LXN:A:101 8~9,34,38~39,64~65
    4569 9v51:A
    (3.23Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Staphylococcus
    aureus
    1280    		 40966503 Assembly1
    H4B:A:101 8~9,38~39,64~65
    4570 9v7n:B
    (3.11Å)
    		 205 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:D:1~39 1,9~11,36,86~87,167
    rna:E:40~79 3,5~6,205
    GMP:B:301 1,126~127,171~172
    MG:B:302 87,169,171
    MG:B:303 86,127
    MG:B:304 172~173
    MG:B:305 123,170
    MG:B:307 127,171
    4571 9v7o:B
    (3.06Å)
    		 205 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    rna:D:1~39 1,9~11,36,86,166~168
    rna:E:40~79 3,5,205
    GMP:B:301 126~127,129,171
    MG:B:302 87,169,171
    MG:B:303 86,127
    MG:B:304 172~173
    MG:B:305 123,170
    MG:B:307 127,171
    4572 9v7p:B
    (3.01Å)
    		 207 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    MG:B:301 2~3,87,169,171
    MG:B:302 86,127
    MG:B:303 172~173
    MG:B:305 123,170
    MG:B:306 3,127,171,205
    4573 9v7q:B
    (3.27Å)
    		 203 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    MG:B:301 3,87,169,171
    MG:B:302 86,127
    MG:B:303 172~173
    MG:B:304 123,170
    MG:B:306 3,127,171,205
    4574 9wb3:R
    (3.17Å)
    		 75 GO:0039689 (P) negative stranded viral... N/A RF00386 rhinovirus
    B14
    12131    		 N/A Assembly1
    protein:A:2~180 48~49,60,62~63,71~72
    4575 9wb4:R
    (3.32Å)
    		 75 GO:0039689 (P) negative stranded viral... N/A RF00386 rhinovirus
    B14
    12131    		 N/A Assembly1
    protein:A:2~180 48~49,60,62~63,71~72
    4576 9x6b:B
    (2.86Å)
    		 201 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    MG:B:301 169,171
    MG:B:302 86,127
    MG:B:303 172~173
    MG:B:304 123,170
    MG:B:306 127,171,205
    << < 36 37 38 39 40 41 42 43 44 45 46 > >>
    Go to page

    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.