SEQ2FUN

FURNA
Download all results in tab-seperated text for 3576 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    701 4qln:A
    (2.65Å)
    		 117 GO:0180001 (F) cyclic-di-AMP binding
    GO:0010468 (P) regulation of gene expr...    		 URS000080E09A RF00379 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    MB4
    273068    		 25086509 Assembly1
    rna:A-2:2~123 13~15,19~22,29,75~77,99~101,12
    1~122
    2BA:A:201 6~8,45,69~71,84~85,109~112
    2BA:A:202 10,24~26,41~43,91,95,104~105
    MG:A:203 28,96~98
    MG:A:204 72~73
    702 4qoz:A
    (2.304Å)
    		 26 GO:0006398 (P) mRNA 3'-end processing ... URS000233597C RF00032 Homo
    sapiens
    9606    		 25002523
    517    		 Assembly1
    protein:B:61~348 13~21,24~26
    protein:C:127~199 3~10,12,14~16
    703 4qoz:D
    (2.304Å)
    		 18 GO:0006398 (P) mRNA 3'-end processing ... URS000233597C N/A Homo
    sapiens
    9606    		 25002523
    517    		 Assembly2
    protein:E:61~350 13,16~17,19~20,23~26
    704 4r0d:A
    (3.676Å)
    		 617 GO:0000373 (P) Group II intron splicing URS000080DD74 RF02012
    RF00029    		 Pylaiella
    littoralis
    2885    		 25252982 Assembly1
    rna:B:1~14 121~122,205~207,209,254~261,29
    3~295,551~552
    SPM:A:701 20~21,23
    SPM:A:702 517,531,533
    IRI:A:704 170~172,553~554,569~570
    IRI:A:705 113~114
    IRI:A:706 192,194~197,294
    IRI:A:707 519~522
    IRI:A:708 431,491,493
    IRI:A:709 14,338
    IRI:A:710 6,421,577~578
    IRI:A:711 165~168
    IRI:A:714 120,148~149
    IRI:A:715 199,289,291
    IRI:A:716 507~508,545
    IRI:A:717 592~593,608
    IRI:A:718 381~383,401~402
    IRI:A:720 347~349,414~415
    IRI:A:722 342~343
    IRI:A:723 98~100
    IRI:A:725 163~164
    IRI:A:728 443~445
    IRI:A:729 458~459
    IRI:A:731 461~462
    IRI:A:732 589~590
    IRI:A:733 379~380
    IRI:A:734 384~386
    IRI:A:735 218,226~227
    IRI:A:736 262~264
    IRI:A:738 448~449,452
    IRI:A:739 82,391,393
    MG:A:741 551~552,574
    MG:A:742 552,574
    MG:A:743 2,4~5
    MG:A:744 6~7,341
    MG:A:784 106~107
    MG:A:786 33~34
    MG:A:794 159,317~318,325
    MG:A:798 437~438
    MG:A:802 429~430
    MG:A:807 433~434
    MG:A:812 211,231
    NA:A:822 421,550,574
    NA:A:827 115,152~153
    NA:A:828 447~448
    NA:A:830 469,471
    NA:A:831 594~595,610
    NA:A:832 63~65
    NA:A:836 509,586
    705 4rdx:C
    (2.55Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00008116B8 RF00005 Thermus
    thermophilus
    HB27
    262724    		 25722375 Assembly1
    protein:A:2~421 -1,1,27,34~37,68,70~76
    protein:A-2:2~421 -1,10,26~27
    706 4rqe:B
    (4.0Å)
    		 84 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00008FED48 RF01852
    RF00005    		 Homo
    sapiens
    9606    		 26433229
    1285

    s70

    787

    757

    805    		 Assembly1
    protein:A:2~479 47C,47K,56
    707 4rqe:D
    (4.0Å)
    		 83 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00008FED48 RF01852
    RF00005    		 Homo
    sapiens
    9606    		 26433229
    1285

    s70

    787

    757

    805    		 Assembly1
    protein:C:2~474 20,47C,47K
    708 4rqf:C
    (3.503Å)
    		 63 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00008FED48 RF01852
    RF00005    		 Homo
    sapiens
    9606    		 26433229
    s70

    787

    757

    805    		 Assembly1
    protein:A:2~476 20,47B,47C,47J,47K,47L,56
    709 4rzd:A
    (2.75Å)
    		 99 GO:0008616 (P) queuosine biosynthetic ... URS0000868518 RF02680 Faecalibacterium
    prausnitzii
    853    		 26106162 Assembly1
    PRF:A:201 7~8,17~18,84~85
    710 4tna:A
    (2.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 361973 Assembly1
    MG:A:78 20~21
    711 4tra:A
    (3.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Saccharomyces
    cerevisiae
    4932    		 3272146
    712 4tua:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    DH10B
    316385    		 25352689 Assembly1
    rna:QA:5~1531 30~32,34,38,40~41
    rna:QX:15~25 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:RG:2~182 56~57
    protein:R0:2~83 0~1
    MG:QV:102 75~76
    713 4tua:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    DH10B
    316385    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~25 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    protein:XI:2~128 32~35
    protein:YG:2~182 56~57
    protein:Y0:2~83 0~1,63
    MG:XV:102 75~76
    714 4tub:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 30~32,34,38~41
    rna:QX:15~23 34~37
    rna:RA:6~2906 10~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:RG:2~182 56~57
    protein:R0:2~83 0~1,76
    MG:QV:102 75~76
    715 4tub:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~24 34~37
    rna:YA:6~2897 2,10~12,24~25,74~76
    protein:XI:2~128 32~35
    protein:YG:2~182 56~57
    protein:Y0:2~83 0~1,63,76
    MG:XV:102 75~76
    716 4tuc:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 30~32,34,38,40~41
    rna:QX:15~25 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:RG:2~182 56~57
    protein:R0:2~83 0~1
    MG:QV:102 75~76
    717 4tuc:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~24 34~37
    rna:YA:6~2897 10~11,24~25,74~76
    protein:XI:2~128 33~35
    protein:YG:2~182 56~57
    protein:Y0:2~83 0~1
    MG:XV:102 75~76
    718 4tud:QV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly1
    rna:QA:5~1531 29~32,34,38,40~41
    rna:QX:15~23 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:RG:2~182 56~57
    protein:R0:2~83 0,76
    MG:QV:102 75~76
    719 4tud:XV
    (3.6Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    str.
    K-12
    substr.
    MC4100
    1403831    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:15~23 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    protein:XI:2~128 32~35
    protein:YG:2~182 56~57
    MG:XV:102 75~76
    720 4tue:QV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Vittia
    pachyloma
    181333    		 25352689 Assembly1
    rna:QA:5~1531 29~32,34,38~41
    rna:QX:15~23 34~37
    rna:RA:6~2897 10~12,24~25,74~76
    protein:QI:2~128 32~35
    protein:RG:2~182 56~57
    protein:R0:2~83 0~1,76
    MG:QV:102 75~76
    721 4tue:XV
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Vittia
    pachyloma
    181333    		 25352689 Assembly2
    rna:XA:5~1531 30~32,34,38,40~41
    rna:XX:13~23 34~37
    rna:YA:6~2897 10~12,24~25,74~76
    protein:XI:2~128 32~35
    protein:YG:2~182 56~57
    protein:Y0:2~83 0~1,63,76
    MG:XV:102 75~76
    722 4tuw:C
    (2.902Å)
    		 28 GO:0006398 (P) mRNA 3'-end processing ... URS0002335968 RF00032 synthetic
    construct
    32630    		 25002523 Assembly1
    protein:A:185~258 1,5~12,14,16~18
    723 4tuw:D
    (2.902Å)
    		 26 GO:0006398 (P) mRNA 3'-end processing ... URS000080E236 RF00032 synthetic
    construct
    32630    		 25002523 Assembly2
    protein:B:186~258 5~12,14,16~18
    724 4tux:C
    (3.08Å)
    		 25 GO:0006398 (P) mRNA 3'-end processing ... URS000080E236 RF00032 synthetic
    construct
    32630    		 25002523 Assembly1
    protein:A:186~257 5~12,14,16~18
    725 4tux:D
    (3.08Å)
    		 26 GO:0006398 (P) mRNA 3'-end processing ... URS000080E236 RF00032 synthetic
    construct
    32630    		 25002523 Assembly2
    protein:B:186~256 5~12,14,16~18
    726 4tv0:B
    (2.601Å)
    		 26 GO:0006398 (P) mRNA 3'-end processing ... URS000080E236 RF00032 synthetic
    construct
    32630    		 25002523 Assembly1
    protein:A:188~253 6~12,14,16~17
    CA:B:101 5~6
    727 4tzp:B
    (8.503Å)
    		 70 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly1
    rna:C:1~102 18,33~35,55
    728 4tzp:E
    (8.503Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly2
    rna:F:1~102 18,33~36,55
    729 4tzv:B
    (5.03Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly1
    rna:C:1~102 18,33~36,55
    730 4tzw:B
    (4.671Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828
    23892783    		 Assembly1
    rna:C:1~102 18,33~36,41,55
    SR:B:108 41~42
    SR:B:111 52,57
    731 4tzx:X
    (2.01Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... URS000080E2A9 RF00167 Vibrio
    vulnificus
    672    		 25185828 Assembly1
    ADE:X:101 21~22,47,51~52,74~75
    MG:X:107 32~33,38
    MG:X:108 28,42~43
    732 4tzy:X
    (2.57Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... URS000080E2A9 RF00167 Vibrio
    vulnificus
    672    		 25185828 Assembly1
    ADE:X:101 21~22,47,51~52,74~75
    SR:X:102 31~32
    SR:X:103 46~47
    MG:X:107 32~33
    733 4tzz:B
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly1
    rna:C:1~102 18,32~36,40~42,55
    734 4tzz:E
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly2
    rna:F:1~102 18~19,33~36,41~42,55
    MG:E:101 9,12
    MG:E:102 72,74
    MG:E:104 46~47
    735 4tzz:H
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly3
    rna:I:1~102 18~19,32~36,41~42,55
    MG:H:105 8~9
    736 4tzz:K
    (3.64Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DE51 RF00005 Bacillus
    subtilis
    1423    		 25185828 Assembly4
    rna:L:1 18~19,32~36,40~42,55
    737 4ue4:A
    (7.0Å)
    		 266 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000086853B RF01854 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 26344568 Assembly1
    protein:C:330~431 149~150,170,172
    738 4ue5:A
    (9.0Å)
    		 299 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...    		 URS0000868546 RF00017
    RF01856    		 Canis
    lupus
    familiaris
    9615    		 26344568 Assembly1
    protein:C:50~244 171~176,223~228
    protein:D:1~433 194~195
    protein:E:2~75 25,59,290~291
    739 4ug0:S6
    (3.6Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS0000326EAC RF00005 Homo
    sapiens
    9606    		 25901680
    M352_0.6

    1235

    s46

    1075    		 Assembly1
    rna:L5:1~5069 4~5,19,56,70~72,76
    rna:S2:1~1869 33,36
    protein:Lo:2~106 75~76
    protein:SF:14~204 31~34,36~40
    MG:S6:105 18,58
    740 4ujc:AA
    (9.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Oryctolagus
    cuniculus
    9986    		 25064512 Assembly1
    protein:AB:808~1433 1,68~71,73~76
    protein:BI:3~214 1~2
    protein:BJ:9~178 55~59
    protein:Bo:1~106 19,55~57
    protein:CQ:8~146 30~33
    rna:AC:44~353 35~37
    rna:A2:1~5022 13~14
    rna:C1:1~1869 29~31,34,41~42
    741 4ujc:AC
    (9.5Å)
    		 261 GO:0043022 (F) ribosome binding
    GO:0006417 (P) regulation of translation    		 URS000080E1FF RF00061
    RF00620    		 11103 25064512 Assembly1
    rna:AA:1~76 342~344
    rna:A2:1~5022 90~94
    rna:C1:1~1869 265~268,299,338~346,348~349
    protein:CC:57~278 351~353
    protein:CD:2~213 349~350
    protein:CF:17~204 337,339
    protein:CO:15~151 334~338
    protein:Cb:4~83 164~165,231~232,234~235,237
    protein:Cc:8~69 333,335
    742 4ujd:BA
    (8.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Oryctolagus
    cuniculus
    9986    		 25064512 Assembly1
    rna:A2:1~5022 12~14
    rna:BC:44~353 34~37
    rna:C1:1~1869 29~31,34,39,41~42
    protein:AI:3~214 75~76
    protein:AJ:9~178 47,51~53,57
    protein:Ao:1~106 18,54~58
    protein:BB:808~1433 1,68~71,73~76
    protein:CQ:8~146 30~33
    743 4ujd:BC
    (8.9Å)
    		 261 GO:0043022 (F) ribosome binding
    GO:0006417 (P) regulation of translation    		 URS000080E1FF RF00061
    RF00620    		 11103 25064512 Assembly1
    rna:BA:1~76 342~344
    rna:C1:1~1869 264~268,299,338~344,346~347,34
    9
    protein:CC:57~278 351~353
    protein:CD:2~213 349~352
    protein:CO:15~151 335~336,338
    protein:Cb:4~83 164~165,231,235,237
    protein:Cc:8~69 333~336
    744 4uje:AV
    (6.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Oryctolagus
    cuniculus
    9986    		 24995983 Assembly1
    rna:AX:34~61 35~37
    rna:B1:1~1869 29~31,34,38~39,41
    rna:A2:1~5022 12~13,24,74~76
    protein:BQ:8~146 31~33
    protein:CJ:9~178 20,56~57
    protein:Co:1~106 19,56
    745 4uje:AW
    (6.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Bos
    taurus
    9913    		 24995983 Assembly1
    rna:AX:34~61 36~37
    rna:B1:1~1869 34~35
    rna:A2:1~5022 3~4,19,55~56,70~71,76
    protein:BF:17~204 31~34,36~38,42
    protein:Co:1~106 1,75~76
    746 4uy8:V
    (3.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000034D020 RF00005 Escherichia
    coli
    562    		 25310980 Assembly1
    rna:A:1~2903 11~12,24~25,74~76
    747 4uyj:R
    (3.35Å)
    		 110 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DF52 RF01857 Pyrococcus
    horikoshii
    OT3
    70601    		 25336584 Assembly2
    protein:A:2~75 33~36,77~80,100~101
    protein:B:1~93 33~41,64~65
    748 4uyj:S
    (3.35Å)
    		 110 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080DF52 RF01857 Pyrococcus
    horikoshii
    OT3
    70601    		 25336584 Assembly1
    protein:C:2~75 33~36,77~79,100~101
    protein:D:1~94 33~35,37~41,65
    749 4uyk:R
    (3.22Å)
    		 134 GO:0006617 (P) SRP-dependent cotransla...
    GO:0048501 (C) signal recognition part...    		 URS000080E1FA RF01857 Pyrococcus
    horikoshii
    OT3
    70601    		 25336584 Assembly1
    protein:A:2~83 33~36,77~78,80,124~125
    protein:B:1~97 32~41,64~65
    750 4v3p:S2
    (34.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AD0B9 RF00005 Triticum
    aestivum
    4565    		 25376914 Assembly1
    rna:S3:12~22 35~37
    rna:S1:1~1810 30~31,34,38~41
    rna:L1:1~3391 2~4,10~14,22~27,68~75
    751 4v42:AB
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Thermus
    thermophilus
    274    		 11283358 Assembly1
    rna:A1:1~6 34~36
    752 4v42:AC
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Thermus
    thermophilus
    274    		 11283358 Assembly1
    rna:A1:1~6 34~36
    rna:BA:1~2902 25,75
    753 4v42:AD
    (5.5Å)
    		 74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E2DD RF00005 Thermus
    thermophilus
    274    		 11283358 Assembly1
    protein:AJ:2~156 33,37
    754 4v48:A6
    (11.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 12809609
    755 4v49:AV
    (8.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 12853578 Assembly1
    rna:AA:5~1534 30~32,34,38,40
    rna:AU:6~14 34~36
    rna:B0:1~2877 11~12,25,74~76
    protein:AI:2~128 31~32
    protein:AM:2~126 28~30
    protein:BD:2~179 56~57
    756 4v49:AW
    (8.7Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 12853578 Assembly1
    rna:B0:1~2877 11~12,17,19,64,71~72,74~76
    757 4v4i:0
    (3.71Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E050 RF00005 Thermus
    thermophilus
    HB27
    262724    		 16962654 Assembly1
    rna:w:1~2902 3~4,56,71,76
    rna:y:5~1529 35,38
    rna:1:-3~3 34~35,37
    protein:A:6~229 53,62
    protein:V:8~95 74~75
    protein:h:2~156 30,32,34,40~41
    758 4v4i:z
    (3.71Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 16962654 Assembly1
    rna:w:1~2902 2~3,12~13,25,74~76
    rna:y:5~1529 29~31,34,38,40~41
    rna:1:-3~3 34~37
    protein:E:3~182 19,56
    protein:n:2~126 30~31
    759 4v4j:2
    (3.83Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080E050 RF00005 Thermus
    thermophilus
    HB27
    262724    		 17940016 Assembly1
    rna:w:1~2902 3~4,19,56,71,75~76
    rna:y:5~1541 38~39
    protein:A:6~229 53~55,62
    760 4v4j:z
    (3.83Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001BBAFC RF00005 Thermus
    thermophilus
    HB27
    262724    		 17940016 Assembly1
    rna:w:1~2902 12~13,24,74~76
    rna:y:5~1541 29~32,34,38~41
    rna:3:1~18 34~37
    protein:E:3~182 19,56
    761 4v4n:B1
    (9.0Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00001D39A7 RF00005 Methanocaldococcus
    jannaschii
    2190    		 24153188 Assembly1
    rna:B2:1~1495 34,37~38
    rna:A1:7~3046 57~58,75~77
    protein:AA:1~216 63~64
    762 4v4p:BB
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Thermus
    thermophilus
    HB8
    300852    		 15802605 Assembly1
    rna:AA:1~2902 19,55~56,64,71~72,74~76
    rna:BA:5~1542 34~35
    rna:B1:6~71 33~38
    protein:AV:1~177 56~57
    protein:BP:2~126 39~40
    763 4v4p:BC
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Thermus
    thermophilus
    HB8
    300852    		 15802605 Assembly1
    rna:AA:1~2902 11~13,24~25,74~76
    rna:BA:5~1542 29~32,34,38~41
    rna:B1:6~71 34~38
    protein:AG:10~156 19,56
    protein:A3:2~87 3,64
    protein:BL:2~128 30~33
    protein:BP:2~126 28~30
    764 4v4r:AV
    (5.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 29~34,38,40~41
    rna:AX:114~130 34~37
    rna:BA:1~2902 2,11~13,25,74~76
    protein:AI:2~128 30~33
    protein:AY:8~354 36~37
    protein:BG:10~156 56~57
    765 4v4r:AW
    (5.9Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 34~35
    rna:BA:1~2902 75~76
    protein:AG:2~156 30~31,37,39~41
    protein:B4:1~73 73~75
    766 4v4s:AV
    (6.76Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 29~34,38,40~41
    rna:AX:114~130 35~37
    rna:BA:1~2902 2,11~13,25,74~76
    protein:AI:2~128 30~33
    protein:AM:2~126 28,30
    protein:BG:10~156 19,56~57
    767 4v4s:AW
    (6.76Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 34~35
    rna:BA:1~2902 75~76
    protein:AG:2~156 37,40
    protein:B4:1~73 74~75
    768 4v4t:AV
    (6.46Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 29~34,38,40~41
    rna:AX:114~130 35~37
    rna:BA:1~2902 11~13,24~25,74~76
    protein:AI:2~128 30~33
    protein:AM:2~126 28~30
    protein:BG:10~156 19,56~57
    protein:BQ:9~157 1~2
    769 4v4t:AW
    (6.46Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16377566 Assembly1
    rna:AA:5~1542 34~35
    rna:BA:1~2902 75~76
    protein:AG:2~156 31,37,39~41
    protein:B4:1~73 73~75
    770 4v4v:AU
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 34,36~37
    rna:AV:1~76 73~74
    rna:B0:16~2902 63~64,74~76
    protein:BK:3~133 53,55
    771 4v4v:AV
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 30~31,34
    rna:AU:1~76 75~76
    rna:B0:16~2902 11~12,24
    protein:BK:3~133 1~2
    protein:BU:1~84 53~54
    772 4v4v:AW
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    protein:AG:19~155 31,40~41
    rna:B0:16~2902 2~3,17,71,76
    773 4v4w:AU
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 35~37,41~42
    rna:AV:1~76 17,72~73
    rna:B0:16~2902 63~64,71~72,74~76
    774 4v4w:AV
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AA:5~1534 29~34,38
    rna:AU:1~76 47,75~76
    rna:AW:1~76 33,37~39
    rna:B0:16~2902 3,12,76
    protein:BK:3~133 2~3
    775 4v4w:AW
    (15.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000011107D RF00005 Escherichia
    coli
    562    		 16713583
    16714018    		 Assembly1
    rna:AV:1~76 34~36
    rna:B0:16~2902 3~4,17,56,76
    protein:B1:1~52 66~67
    776 4v4x:AC
    (5.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 29~32,34~41
    rna:BA:1~2902 2,11~13,25,74~76
    protein:AL:2~128 30~33
    protein:AP:2~126 28~29
    protein:BG:1~182 19,56~57
    protein:BZ:1~85 1~2,74
    777 4v4x:AD
    (5.0Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFDE RF00005 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 34~38
    rna:BA:1~2902 4,17,19,56,70~71,75~76
    protein:AJ:2~156 32~33,41
    protein:BC:1~228 54,56,61~62
    protein:B3:1~71 74~75
    778 4v4y:AB
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 34~37
    rna:A1:3~52 34~37
    rna:BA:1~2902 12,51~53,62~63,71,74~76
    protein:BP:6~141 54~55
    protein:BY:1~180 55~56
    779 4v4y:AC
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 29~32,34,38~41
    rna:A1:3~52 34~37
    rna:BA:1~2902 11~13,25,74~76
    protein:AL:2~128 30~33
    protein:AP:2~126 28~30
    protein:BG:1~182 19,56~57
    protein:BZ:1~85 2,74
    780 4v4y:AD
    (5.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 34,37
    rna:A1:3~52 35~36
    rna:BA:1~2902 4,19~20,56,70~71,76
    protein:AJ:2~156 32~33,37,41
    protein:BC:1~228 54,56,62~63
    781 4v4z:AC
    (4.51Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFF5 RF00005 Escherichia
    coli
    562    		 17051149 Assembly1
    rna:AA:5~1542 29~32,34,38~41
    rna:A1:1~27 34~37
    rna:BA:1~2902 11~13,24~25,74~76
    protein:AL:2~128 31~33
    protein:AP:2~126 28~29
    protein:BG:1~182 19,56~57
    protein:BZ:1~85 1~2,74
    782 4v4z:AD
    (4.51Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000080DFDE RF00005 Thermus
    thermophilus
    HB8
    300852    		 17051149 Assembly1
    rna:AA:5~1542 34,37~38
    rna:A1:1~27 35~36
    rna:BA:1~2902 4,19,56,70~71,76
    protein:AJ:2~156 32~33,40~41
    protein:BC:1~228 54,56,61~63
    783 4v51:AV
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly1
    rna:AA:5~1531 30~31,34,38~41
    rna:AW:1~76 39~40
    rna:AX:12~22 34~37
    rna:BA:6~2897 11~13,24~25,74~76
    protein:B0:1~85 1~2,76
    protein:BG:2~182 19,56~57
    MG:AV:101 75~76
    MG:AV:102 8~9
    784 4v51:AW
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly1
    protein:AG:2~156 31~34,40~42
    protein:AK:11~129 39~40
    protein:B1:8~95 74~75
    rna:AV:1~76 35~36
    rna:BA:6~2897 17,19,56,72,76
    MG:AW:104 6~7
    MG:AW:107 12~13
    MG:AW:109 25~26
    MG:AW:114 27~28
    MG:AW:117 15,48
    MG:AW:120 9,46
    785 4v51:AY
    (2.8Å)
    		 19 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly1
    rna:AA:5~1531 34~37
    rna:AX:12~22 34~37
    rna:BA:6~2897 37~38
    protein:AM:2~125 37,39
    786 4v51:CV
    (2.8Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly2
    rna:CA:5~1531 30~32,34,38,40~41
    rna:CW:1~76 39~40
    rna:CX:12~22 34~37
    rna:DA:6~2897 11~13,24~25,74~76
    protein:D0:1~85 1~2,76
    protein:DG:2~182 19,56~57
    MG:CV:102 8~9
    787 4v51:CW
    (2.8Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly2
    protein:CG:2~156 32~34,40~41
    protein:CK:11~129 39~40
    protein:D1:8~95 74~75
    rna:CV:1~76 35~36
    rna:DA:6~2897 17,19,56,71~72,76
    MG:CW:106 25~26
    788 4v51:CY
    (2.8Å)
    		 19 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 16959973 Assembly2
    rna:CA:5~1531 34~37
    rna:CX:12~22 34~37
    rna:DA:6~2897 37~38
    789 4v5a:AV
    (3.5Å)
    		 17 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 synthetic
    construct
    32630    		 17660830 Assembly1
    rna:AA:5~1531 29~31,33,37,39~40
    rna:AX:12~22 33~36
    MG:AV:104 28~29
    790 4v5a:AW
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 17660830 Assembly1
    rna:AA:5~1531 35~36,38~39
    rna:BA:6~2897 18,20,57,72~73,77
    protein:AG:2~156 32~34,39,41~43
    protein:B1:8~95 75~76
    MG:AW:102 17~18
    MG:AW:103 37~38
    MG:AW:104 63~64
    MG:AW:105 6~7
    MG:AW:111 25~26
    MG:AW:119 49,60
    MG:AW:122 47,49
    MG:AW:123 9,46
    791 4v5a:CV
    (3.5Å)
    		 17 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 synthetic
    construct
    32630    		 17660830 Assembly2
    rna:CA:5~1531 29~31,33,37~38,40
    rna:CX:12~22 33~36
    MG:CV:104 28~29
    792 4v5a:CW
    (3.5Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    562    		 17660830 Assembly2
    rna:CA:5~1531 35~36,38
    rna:DA:6~2897 20,57,72~73,77
    protein:CG:2~156 33~34,42~43
    protein:D1:8~95 75~76
    MG:CW:105 6~7
    MG:CW:119 8,15,49
    MG:CW:120 1,74~75
    MG:CW:122 47~49
    793 4v5c:AV
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 19363482 Assembly1
    rna:AA:5~1531 30~32,34,38~41
    rna:AX:13~22 34~37
    rna:BA:6~2897 11~13,24~25,74~76
    protein:AM:2~125 28~29
    protein:B0:2~85 1~2,76
    protein:BG:2~182 19,56~57
    MG:AV:101 75~76
    MG:AV:102 8~9
    794 4v5c:AW
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19363482 Assembly1
    protein:AG:2~156 31~34,39~42
    protein:AK:11~129 39~40
    rna:AV:1~76 35~36
    rna:BA:6~2897 17,19,71~72,76
    MG:AW:106 8,12~13
    MG:AW:107 12~13
    MG:AW:108 25~26
    MG:AW:111 38~39
    MG:AW:112 26~27
    MG:AW:113 27~28
    MG:AW:115 47~48
    MG:AW:116 8,15
    MG:AW:119 9,46
    MG:AW:120 44~45
    795 4v5c:CV
    (3.3Å)
    		 77 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000041AF00 RF00005 Escherichia
    coli
    K-12
    83333    		 19363482 Assembly2
    rna:CA:5~1531 30~32,34,38~41
    rna:CW:1~76 39~40
    rna:CX:13~22 34~37
    rna:DA:6~2897 11~13,24~25,74~76
    protein:CM:2~125 28~29
    protein:D0:2~85 1~2,76
    protein:DG:2~182 19,56~57
    MG:CV:101 75~76
    796 4v5c:CW
    (3.3Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19363482 Assembly2
    rna:CA:5~1531 35,37
    rna:CX:13~22 34~35
    rna:DA:6~2897 19,56,72,76
    protein:CG:2~156 32~33,40~41
    protein:CK:11~129 39~40
    protein:DC:18~223 63~64
    MG:CW:104 6~7
    MG:CW:106 8,12
    MG:CW:107 12~13
    MG:CW:108 26~27
    MG:CW:111 38~39
    MG:CW:116 7~8,48~49
    MG:CW:118 73~74
    MG:CW:119 9,46
    MG:CW:120 45~46
    MG:CW:121 35~36
    797 4v5d:AW
    (3.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19363482 Assembly1
    protein:AG:2~156 32~33,40~42
    protein:AK:11~129 39~40
    rna:BA:6~2897 17,19,56,72,76
    MG:AW:101 3~4
    MG:AW:102 11~12
    MG:AW:103 8~9
    MG:AW:105 48,59
    MG:AW:106 73~74
    798 4v5d:CW
    (3.5Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 19363482 Assembly2
    protein:CG:2~156 32~34,40~42
    protein:CK:11~129 39~40
    protein:D1:3~95 73~75
    rna:CV:1~77 35~36
    rna:DA:6~2897 17,19,56,72,76
    MG:CW:101 3~4
    MG:CW:103 9,13
    MG:CW:104 12~13
    MG:CW:105 47~48
    MG:CW:106 73~74
    799 4v5e:AV
    (3.45Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 18988853 Assembly1
    rna:AA:5~1531 30~31,34,38~41
    rna:AX:17~24 34~37
    rna:BA:6~2897 2~3,11~13,24~25,74~76
    protein:AI:2~128 32~34
    protein:AM:2~121 28~29
    protein:AY:6~356 1,36,75~76
    protein:BG:2~182 19,56~57
    MG:AV:101 75~76
    MG:AV:103 23~24
    MG:AV:104 20~21
    MG:AV:106 44~45
    800 4v5e:AW
    (3.45Å)
    		 76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00005AA258 RF00005 Escherichia
    coli
    K-12
    83333    		 18988853 Assembly1
    protein:AG:2~156 31~33,41
    protein:AK:11~129 39~40
    protein:BC:18~223 62~64
    rna:BA:6~2897 17,19,71~72,76
    MG:AW:102 60~61
    MG:AW:103 8,11~12
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 > >>
    Go to page

    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.