SEQ2FUN

FURNA
Download all results in tab-seperated text for 13 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 3dil:A
    (1.9Å)
    		 174 GO:0009085 (P) L-lysine biosynthetic p... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    1PE:A:250 142,159~160
    1PE:A:251 141,160~161
    2 3dio:X
    (2.4Å)
    		 174 GO:0009085 (P) L-lysine biosynthetic p... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    1PE:X:280 7,170
    3 4ybb:DA
    (2.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    K-12
    83333    		 25775265 Assembly1
    1PE:DA:3185 22~23,519
    1PE:DA:3203 948~949,961
    4 5it8:DA
    (3.12Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    1PE:DA:3183 22~23,519
    1PE:DA:3200 948~949,961,985
    5 5j5b:DA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    1PE:DA:3185 22~23,519
    1PE:DA:3202 948~949,961,984~985
    6 5j7l:DA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    1PE:DA:3185 22,519
    1PE:DA:3202 949,961
    7 5j88:DA
    (3.32Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 27382179 Assembly1
    1PE:DA:3185 22~23,519
    1PE:DA:3203 949,961
    8 5j8a:DA
    (3.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 27382179 Assembly1
    1PE:DA:3185 22~23,519
    1PE:DA:3202 949,961,985
    9 5j91:DA
    (2.96Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    1PE:DA:3185 22~23,519
    1PE:DA:3202 948~949,961,984~985
    10 5jc9:DA
    (3.03Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    1PE:DA:3188 22,519
    1PE:DA:3205 961,984~985
    11 6i7v:DA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 30359641 Assembly1
    1PE:DA:3034 22~23
    1PE:DA:3065 949,961,985
    12 9sdf:T
    (1.9Å)
    		 86 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Thermus
    thermophilus
    HB27
    262724    		 12110594 Assembly1
    1PE:T:106 49~51
    13 9sfq:T
    (1.89Å)
    		 86 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Thermus
    thermophilus
    274    		 12110594 Assembly1
    1PE:T:107 49~51
    << < 1 > >>
    Go to page

    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.