FURNA

Download all results in tab-seperated text for 17 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	3muv:R (3.2Å)	91	GO:0035438 (F) cyclic-di-GMP binding	URS000080DF93	RF01051	Vibrio cholerae 666	20690679		Assembly1 2BA:R:358 14,16~17,20~21,46~47,92~93
2	4qk8:A (3.05Å)	122	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS00021ED98F	RF00379	Thermoanaerobacter pseudethanolicus 496866	25086507		Assembly1 2BA:A:201 5~8,45,68~72,82~83,108 2BA:A:202 9,23~26,41~44,88,93,102~103
3	4qk9:A (3.05Å)	117	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS00021ED9C8	RF00379	Thermovirga lienii 336261	25086507		Assembly1 2BA:A:201 4~6,49,69~72,86~87,111~114 2BA:A:202 8,26~29,45~47,92,97,106~107
4	4qka:A (3.2Å)	120	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS00021ED98F	RF00379	Thermoanaerobacter pseudethanolicus 496866	25086507		Assembly1 2BA:A:201 5~8,45,68~72,82~83,108 2BA:A:202 9,23~25,41~43,88,93,102~103
5	4qlm:A (2.721Å)	108	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000080E09A	RF00379	Caldanaerobacter subterraneus subsp. tengcongensis MB4 273068	25086509		Assembly1 2BA:A:203 6~9,45,69~72,84~85,109~112 2BA:A:204 10,24~27,41~44,90~91,95,104
6	4qln:A (2.65Å)	117	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000080E09A	RF00379	Caldanaerobacter subterraneus subsp. tengcongensis MB4 273068	25086509		Assembly1 2BA:A:201 6~8,45,69~71,84~85,109~112 2BA:A:202 10,24~26,41~43,91,95,104~105
7	4w90:C (3.118Å)	101	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000080DDC9	RF00379	Bacillus subtilis 1423	25271255		Assembly1 2BA:C:201 9,25~28,60~62,95~96,100,109~11 0 2BA:C:202 5~7,64,80~82,89~90,114~116
8	4w92:C (3.209Å)	96	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000080DDC9	RF00379	Bacillus subtilis 1423	25271255		Assembly1 2BA:C:208 5~7,64,80~82,89~90,114~116 2BA:C:209 9,25~28,60~63,95~96,100,109~11 0
9	6n5k:A (3.098Å)	125	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF5B	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,48,71~75,85~86,110~112 2BA:A:202 9,26~29,44~46,91~92,96,105~106
10	6n5n:A (2.951Å)	125	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF65	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,48,71~75,85~86,110~111 2BA:A:202 9,26~29,44~46,91~92,96,105~106
11	6n5o:A (2.708Å)	126	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF62	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,49,72~76,86~87,112~113 2BA:A:202 9,27~30,45~47,92,97,106~107
12	6n5p:A (2.991Å)	127	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF7A	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,50,73~77,87~88,113 2BA:A:202 9,28~31,46~48,93,98,107~108
13	6n5q:A (2.946Å)	128	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF57	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,51,74~78,88~89,113~114 2BA:A:202 9,29~32,47~49,94,99,108~109
14	6n5s:A (2.802Å)	123	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF70	RF00379	Homo sapiens 9606	N/A	M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:202 5~8,47,70~74,84~85,109~111 2BA:A:203 9,25~28,43~46,90,95,104~105
15	6n5t:A (2.787Å)	126	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF7C	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 s16 1264 1367 s55 354 s50 M065_0.6 M153_0.6 467	Assembly1 2BA:A:201 5~7,49,72~76,86~87,112 2BA:A:202 9,27~30,45~48,92~93,97,106~107
16	6wtl:A (2.85Å)	124	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF5D	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,47,70~74,84~85,110 2BA:A:202 9,25~28,43~46,90,95,104~105
17	6wtr:A (3.082Å)	125	GO:0180001 (F) cyclic-di-AMP binding GO:0010468 (P) regulation of gene expr...	URS000197CF84	RF00379	Homo sapiens 9606	N/A	M145_0.6 M269_0.6 1311 M024_0.6 M347_0.6 M153_0.6 1367 s55 354 s50 M065_0.6 1264 467	Assembly1 2BA:A:201 5~8,48,71~75,85~86,110~112 2BA:A:202 9,26~29,44~46,91,96,105~106

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.