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FURNA
Download all results in tab-seperated text for 6 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 8ifb:A
    (2.43Å)

    1519 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    38227611 Assembly1
    84D:A:1738 1404~1405,1407~1408,1491,1493~
    1495

    84D:A:1739 128,132~133,229~231
    84D:A:1740 31,48~49,116,306
    84D:A:1741 23~24,557~559
    84D:A:1742 665~669,735~736
    2 8ifb:a
    (2.43Å)

    2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    38227611 Assembly1
    84D:a:3255 1906~1907,1920~1923
    84D:a:3256 2647,2670~2673
    84D:a:3257 2521,2523~2525,2535~2536,2541
    84D:a:3258 1769~1770,1978~1980,1982~1983
    84D:a:3259 829,2248,2259~2260
    84D:a:3260 980,1003,1025,1135~1139,1144
    84D:a:3261 1443~1445,1464~1466
    84D:a:3262 2399~2401,2413~2415
    3 8ifd:1A
    (2.59Å)

    3717 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000E60B81 RF02543 Homo
    sapiens

    9606
    38227611
    M054_0.6

    1306

    769

    706

    1303

    762

    42

    1148

    1149

    764

    870

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    546

    s52

    s51

    s50

    931

    813

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    673

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    704

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    M273_0.6

    s99

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    853

    924

    M044_0.6

    1245

    s62

    s96

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    1026

    100

    s61

    977

    976

    974

    852

    970

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    1375

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    162

    M070_0.6

    M272_0.6

    M020_0.6

    M050_0.6

    1187

    1182

    815

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    872

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    1183

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    688

    1360

    684

    800

    1368
    Assembly1
    84D:1A:5101 4991~4992,4994,5054
    84D:1A:5102 2834,4978,5049
    84D:1A:5103 4641,4643~4644,4652~4653
    84D:1A:5104 2843,4632~4633,4660~4663
    84D:1A:5105 406~407,409~410,2306,2330~2331
    84D:1A:5106 380~384
    84D:1A:5107 2788,2799~2801
    84D:1A:5108 713~714,949~952
    84D:1A:5109 4493~4495,4512~4514
    84D:1A:5110 2853~2854,3831~3832,4499,4529~
    4530,4551~4552

    84D:1A:5111 3912~3913,3915,4191,4198
    84D:1A:5112 3874~3875,3878,4402
    84D:1A:5113 1934~1936,1938~1939
    84D:1A:5114 3696~3697
    84D:1A:5115 1931,1933,1941~1942,2036~2037,
    2039~2040

    84D:1A:5116 3705~3706,3922,4182
    84D:1A:5117 4299,4309,4367~4368
    84D:1A:5118 4310,4330,4368
    84D:1A:5119 4275~4277
    84D:1A:5120 1733,1795~1797
    84D:1A:5121 4322,4325~4327
    4 8ifd:1B
    (2.59Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000F9D45 RF00001 Homo
    sapiens

    9606
    38227611
    931

    1290

    s51

    879
    Assembly1
    84D:1A:5113 87~88
    5 8ifd:1C
    (2.59Å)

    156 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000005270 RF00002
    RF02540
    Homo
    sapiens

    9606
    38227611
    1227

    592

    s24

    993

    1215

    1352

    s37

    1238

    1178

    M085_0.6

    1389

    1360

    589

    375

    M106_0.6
    Assembly1
    84D:1A:5106 21~22
    6 8ifd:2m
    (2.59Å)

    1742 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000868520 RF01960
    RF02542
    RF01959
    RF00177
    Homo
    sapiens

    9606
    38227611
    1303

    1263

    872

    1149

    1267

    764

    954

    957

    692

    1079

    1075

    1072

    1073

    819

    346

    546

    1378

    930

    936

    935

    M296_0.6

    1314

    M141_0.6

    1068

    s72

    M147_0.6

    1060

    s102

    1384

    1386

    M016_0.6

    s48

    926

    822

    1128

    1323

    988

    595

    1327

    707

    986

    796

    836

    762

    790

    838

    1124

    1017

    1393

    1392

    1390

    1236

    1335

    1334

    M109_0.6

    1238

    M273_0.6

    s14

    445

    s99

    1311

    105

    902

    900

    905

    821

    788

    1333

    924

    1244

    s62

    s96

    M074_0.6

    335

    60

    1167

    977

    976

    974

    852

    970

    509

    1037

    1035

    1213

    756

    639

    M148_0.6

    786

    1355

    M065_0.6

    93

    167

    M070_0.6

    813

    M050_0.6

    1188

    1022

    1187

    1029

    815

    727

    722

    883

    604

    606

    884

    749

    779

    608

    996

    M037_0.6

    1055

    878

    1059

    952

    1195

    43

    870

    1380

    325

    758

    770

    610

    1274

    1042

    M127_0.6

    s24

    s61

    804
    Assembly1
    84D:1A:5114 1038~1039,1846
    84D:2m:1901 1727,1729,1802,1804
    84D:2m:1902 50,161,461,470
    84D:2m:1903 932,934~935,1004
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
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