FURNA

Download all results in tab-seperated text for 8 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	8ifc:A (2.9Å)	1519	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177 RF01959 RF02542 RF01960	Escherichia coli 562	38227611		Assembly1 84G:A:1791 1404~1405,1407~1408,1491,1493~ 1498 84G:A:1792 571,819,917~919,1392~1393,1529 84G:A:1793 569~570,821,862~863,873~874,87 6~877
2	8ifc:a (2.9Å)	2753	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02541	Escherichia coli 562	38227611		Assembly1 84G:a:6249 2253~2254,2600 84G:a:6250 379,387,389~390,1882 84G:a:6251 181~182,184~186,211~212 84G:a:6252 39,437~439 84G:a:6253 7~9,2630~2631,2896 84G:a:6254 1444~1445,1447~1448,1461 84G:a:6255 703,1683,1685,1687~1688,1699~1 700
3	8ife:1A (2.57Å)	3717	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000E60B81	RF02543	Homo sapiens 9606	38227611	M054_0.6 1306 769 706 1303 762 42 1148 1149 764 870 167 21 1079 930 1029 1075 1072 1073 s77 1071 819 1373 938 546 s52 s51 s50 931 813 936 s59 995 994 595 1314 991 1312 1311 1028 1150 673 123 124 125 1068 s72 1060 s100 s102 52 533 M227_0.6 1384 375 926 822 1128 988 1321 708 704 705 1328 707 1124 987 1126 703 M077_0.6 1237 83 1181 797 796 795 836 837 791 790 838 1334 s70 1016 1017 1393 610 1012 1013 1236 M290_0.6 763 1231 1232 1233 1335 s17 M109_0.6 1336 1331 1239 1333 589 776 M273_0.6 s99 1389 902 821 900 901 906 905 33 s48 853 924 M044_0.6 1245 s62 s96 1227 883 M035_0.6 1223 M156_0.6 604 M320_0.6 1347 60 s81 M349_0.6 1083 175 1026 100 s61 977 976 974 852 970 M154_0.6 884 s55 979 M153_0.6 183 1238 185 1375 1036 503 1034 1035 1212 M102_0.6 1211 1216 1042 986 467 M148_0.6 1354 M103_0.6 169 91 1127 162 M070_0.6 M272_0.6 M020_0.6 M050_0.6 1187 1182 815 1037 727 M347_0.6 722 935 M086_0.6 1164 1165 1166 606 886 156 748 749 608 M061_0.6 958 1055 878 879 1059 953 952 872 954 957 1107 1352 774 1215 M104_0.6 1173 770 773 1183 1271 1272 1273 779 778 1178 M151_0.6 78 1285 M083_0.6 1041 1040 1043 1045 1044 1288 354 688 1360 684 800 1368	Assembly1 84G:1A:5101 1910~1911,1935,2060,2065 84G:1A:5102 1076,1218~1221,1235 84G:1A:5103 1931,1933,1941~1942,2035~2037, 2039 84G:1A:5104 2312~2313 84G:1A:5105 206,409,2305~2306,2329~2330 84G:1A:5106 2358~2359,3867~3868 84G:1A:5107 377~378,414,2354 84G:1A:5108 83~85,1342,1344 84G:1A:5109 4297~4299,4308~4310,4368 84G:1A:5110 1581~1582,1606~1609,3624 84G:1A:5111 2613,2615~2616,2721~2722 84G:1A:5112 1537,1616~1618,3640 84G:1A:5113 2600~2601,2742~2745 84G:1A:5114 2651~2652,2664~2665,2670,2734 84G:1A:5115 2649~2651,2680~2682 84G:1A:5116 3783~3784,3788,3791~3792,4499~ 4500 84G:1A:5117 4198~4199,4546 84G:1A:5118 4345,4347~4348,4350~4351,4362 84G:1A:5119 313~314,320~321 84G:2D:301 1737~1738,1862 84G:2i:201 4341,4370~4371
4	8ife:1B (2.57Å)	120	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000F9D45	RF00001	Homo sapiens 9606	38227611	931 1290 s51 879	Assembly1 84G:2D:301 78,92
5	8ife:1C (2.57Å)	156	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000005270	RF00002 RF02540	Homo sapiens 9606	38227611	1227 592 s24 993 1215 1352 s37 1238 1178 M085_0.6 1389 1360 589 375 M106_0.6	Assembly1 84G:1A:5104 7~9 84G:1A:5107 16~17
6	8ife:2m (2.57Å)	1742	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000868520	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	38227611	1303 1263 872 1149 1267 764 954 957 692 1079 1075 1072 1073 819 346 546 1378 930 936 935 M296_0.6 1314 M141_0.6 1068 s72 M147_0.6 1060 s102 1384 1386 M016_0.6 s48 926 822 1128 1323 988 595 1327 707 986 796 836 762 790 838 1124 1017 1393 1392 1390 1236 1335 1334 M109_0.6 1238 M273_0.6 s14 445 s99 1311 105 902 900 905 821 788 1333 924 1244 s62 s96 M074_0.6 335 60 1167 977 976 974 852 970 509 1037 1035 1213 756 639 M148_0.6 786 1355 M065_0.6 93 167 M070_0.6 813 M050_0.6 1188 1022 1187 1029 815 727 722 883 604 606 884 749 779 608 996 M037_0.6 1055 878 1059 952 1195 43 870 1380 325 758 770 610 1274 1042 M127_0.6 s24 s61 804	Assembly1 84G:2m:1901 58~59,64,82~84 84G:2m:1902 1138,1140
7	8q4f:A (3.1Å)	1512	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF00177 RF01959 RF02542 RF01960	Escherichia coli 562	N/A		Assembly1 84G:A:1601 1404~1405,1408,1491,1493~1495
8	8q4f:a (3.1Å)	2732	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Escherichia coli 562	N/A		Assembly1 84G:a:3001 2253~2254,2436,2600

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.