SEQ2FUN

FURNA
Download all results in tab-seperated text for 10 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 5aa0:AA
    (5.0Å)
    		 2889 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000868519 RF02540
    RF02541
    RF00002    		 Thermus
    thermophilus
    HB8
    300852    		 26283392 Assembly1
    8AN:AA:3002 2506~2507,2573,2583~2585
    8AN:AA:3003 2251~2253
    2 5aa0:BD
    (5.0Å)
    		 75 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000031D44F RF00005 Thermus
    thermophilus
    HB8
    300852    		 26283392 Assembly1
    8AN:AA:3002 74~75
    3 5tga:1
    (3.3Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    8AN:1:3403 2952~2954
    4 5tga:5
    (3.3Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly2
    8AN:5:3403 2922,2952~2954
    5 5tgm:1
    (3.5Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DCE RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    8AN:P:101 2405,2619,2819~2820
    6 5tgm:5
    (3.5Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000B21DEF RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    8AN:p:101 2405,2619,2819~2820
    7 8eiu:a
    (2.24Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681390 RF02541 Escherichia
    coli
    562    		 36660825 Assembly1
    8AN:Y:101 2506,2553,2583~2585,2602
    8AN:Z:101 2251,2450~2451
    8 8g6w:a
    (2.02Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 37396857 Assembly1
    8AN:Z:101 2251,2450~2451
    9 8g6x:a
    (2.31Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 37396857 Assembly1
    8AN:Z:101 2251,2450~2451
    10 8g6y:a
    (2.09Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 37396857 Assembly1
    8AN:Z:101 2251,2450~2451
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.