FURNA

Download all results in tab-seperated text for 18 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	3j7y:A (3.4Å)	1472	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E357	RF02541 RF02540	Homo sapiens 9606	25278503	591 590 M269_0.6 1165 1328 1075 M019_0.6 175 1199 693 M106_0.6 1191 156 M161_0.6 43 M111_0.6 s79 546 1271 1395 M272_0.6 M013_0.6 M081_0.6 994 996 M087_0.6 1353 1334 M148_0.6 1239 M350_0.6 s93 74 161 104 M043_0.6 800 s25 1187 M088_0.6 1289 s44 1364 s41 1100 1246 1385 687 M016_0.6 s60	Assembly1 A:A:3301 2899,2909~2910,2919
2	4m30:C (2.501Å)	27	N/A	URS000080DE8F	N/A	synthetic construct 32630	24274754		Assembly1 A:C:103 2,26~27
3	4m30:D (2.501Å)	27	N/A	URS000080DE8F	N/A	synthetic construct 32630	24274754		Assembly1 A:D:104 2,26~27
4	4u3n:1 (3.2Å)	3149	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000061F377	RF02540 RF02543	Saccharomyces cerevisiae S288C 559292	25209664		Assembly1 A:1:3401 2764,2793~2794
5	4u3n:5 (3.2Å)	3150	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000061F377	RF02540 RF02543	Saccharomyces cerevisiae S288C 559292	25209664		Assembly2 A:5:3401 2764,2793~2794
6	5fdu:1B (2.9Å)	120	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DFF2	RF00001	Thermus thermophilus HB8 300852	26792896		Assembly1 A:1B:3025 56~57
7	6of6:RA (3.2Å)	2882	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	32601241		Assembly1 A:QY:101 2506~2507,2583~2585,2602
8	6qul:A (3.0Å)	2795	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000E60BAB	RF02540 RF02541	Escherichia coli 562	30948752		Assembly1 A:A:3001 2394~2395,2421~2422
9	7oic:A (3.1Å)	1383	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00023119E2	RF02541 RF02540	Homo sapiens 9606	34315873	591 590 M269_0.6 1165 1328 1201 M019_0.6 495 175 1199 693 M106_0.6 1191 1193 156 M161_0.6 43 161 1395 M272_0.6 M013_0.6 M081_0.6 1075 996 M087_0.6 1353 1334 s25 1239 M350_0.6 s14 s93 74 M111_0.6 104 M043_0.6 120 800 M088_0.6 1289 s44 1364 s41 1100 1246 1385 M148_0.6 M016_0.6 s60 s61	Assembly1 A:A:1674 1229~1230,1239~1240
10	7pd3:A (3.4Å)	1280	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002311A1E	RF02541 RF02540	Homo sapiens 9606	34609277	591 1165 M269_0.6 156 M013_0.6 1228 M089_0.6 1199 693 1191 1075 M111_0.6 1271 1395 M272_0.6 1328 M081_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s14 74 161 s25 1289 s44 1100 1246 1385 687 800 s60 s61	Assembly1 A:A:3309 3007~3008,3032~3033 A:A:3310 3033~3034 A:A:3316 2695,2718,2940,2991 A:A:3321 2717,2719 A:A:3326 2476,2994~2995 A:A:3331 2502~2503,2927 A:A:3333 1993,2507 A:A:3337 2736~2737,2923~2924 A:A:3354 2713,2715 A:A:3385 2458,2669,2710~2711 A:L:201 3034~3035
11	7zta:23S1 (2.7Å)	2903	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02541	Escherichia coli K-12 83333	37322159		Assembly1 A:23S1:3004 2506~2507,2553,2583~2585 A:23S1:3006 2394~2395,2421~2422
12	8evr:A1 (2.87Å)	3198	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681478	RF02543	Saccharomyces cerevisiae 4932	37595043	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 A:A1:3415 2290~2291,2302
13	8evr:B5 (2.87Å)	1173	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681484	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	37595043	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 A:B5:1803 1189~1190 A:B5:1805 1174~1175 A:B5:1820 11~12,1143~1144 A:B5:1841 1170~1171 A:B5:1843 1172~1173 A:B5:1849 1168~1169 A:B5:1872 10,1145~1146 A:B5:1874 1146~1147 A:B5:1901 390~391,408 A:B5:1913 1148~1149 A:B5:1914 1149,1151
14	8evs:A1 (2.62Å)	3198	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681472	RF02543	Saccharomyces cerevisiae 4932	37595043	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 A:A1:3405 2291,2302 A:A1:3418 2290,2302
15	8evs:B5 (2.62Å)	1173	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681484	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	37595043	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 A:B5:1802 1189~1190 A:B5:1804 1174~1175 A:B5:1823 11~12,1143~1144 A:B5:1842 1170~1171 A:B5:1844 1172~1173 A:B5:1851 1168~1169 A:B5:1874 10,1145~1146 A:B5:1876 1146~1147 A:B5:1905 390~391,408 A:B5:1906 408~409 A:B5:1916 1148~1149 A:B5:1923 979~980,1125
16	8evt:A1 (2.2Å)	3192	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681478	RF02543	Saccharomyces cerevisiae 4932	37595043	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 A:A1:3406 2291,2302 A:A1:3410 1935~1936 A:A1:3419 2290~2291,2302~2303
17	8evt:B5 (2.2Å)	1173	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681484	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	37595043	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 A:B5:1802 1189~1190 A:B5:1804 1174~1175 A:B5:1825 11~12,1143~1144 A:B5:1847 1170~1171 A:B5:1848 1172~1173 A:B5:1854 1168~1169 A:B5:1877 10,1145~1146 A:B5:1878 1146~1147 A:B5:1908 390~391,408 A:B5:1909 389~390,408~409 A:B5:1921 1148~1149 A:B5:1928 980,1125 A:B5:1936 1026~1027
18	8evt:EC (2.2Å)	57	N/A	URS000268147B	N/A	Saccharomyces cerevisiae 4932	37595043		Assembly1 A:EC:7005 6950~6951

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.