SEQ2FUN

FURNA
Download all results in tab-seperated text for 11 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 4p20:A
    (2.7Å)

    21 N/A URS000080E29E N/A synthetic
    construct

    32630
    16806634 Assembly1
    AKN:A:101 15,17~21
    AKN:B:101 3~4,6~7
    2 4p20:B
    (2.7Å)

    21 N/A URS000080E29E N/A synthetic
    construct

    32630
    16806634 Assembly1
    AKN:A:101 26,28~29
    AKN:B:101 37,39~43
    3 6ypu:4
    (2.9Å)

    146 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00007DA5A6 RF00177
    RF01959
    RF01960
    Acinetobacter
    baumannii
    ATCC
    19606
    =
    CIP
    70.34
    =
    JCM
    6841

    575584
    32857965 Assembly1
    AKN:4:1607 1402,1404,1488,1490~1494
    4 8ev6:1A
    (2.946Å)

    2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37537169 Assembly1
    AKN:1A:3936 2087,2264~2266,2448,2612
    AKN:1A:3937 347~348,364~365,638
    AKN:1O:202 2009~2010
    5 8ev6:1a
    (2.946Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    37537169 Assembly1
    AKN:1a:1913 1404~1405,1407~1408,1491,1493~
    1498

    AKN:1a:1914 133~135,137,224,227~228
    6 8ev6:1x
    (2.946Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    37537169 Assembly1
    AKN:1A:3936 73~74
    7 8ev6:2A
    (2.946Å)

    2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37537169 Assembly2
    AKN:2A:3576 2065,2252~2254,2436,2600
    AKN:2O:202 1987~1988
    8 8ev6:2a
    (2.946Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    37537169 Assembly2
    AKN:2O:202 1422,1474
    AKN:2a:1911 1404~1405,1408,1491~1498
    9 8ev6:2x
    (2.946Å)

    76 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS000041AF00 RF00005 Escherichia
    coli

    562
    37537169 Assembly2
    AKN:2A:3576 73~74
    10 8syl:A
    (2.9Å)

    2845 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02541 Escherichia
    coli

    562
    37537169 Assembly1
    AKN:A:3360 2253~2254,2436,2600
    11 8syl:a
    (2.9Å)

    1528 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00000ABFE9 RF00177
    RF01959
    RF02542
    RF01960
    Escherichia
    coli

    562
    37537169 Assembly1
    AKN:a:3099 1404~1405,1407~1408,1491~1496,
    1498
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.