SEQ2FUN

FURNA
Download all results in tab-seperated text for 13 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1am0:A

    		 16 N/A URS000080E211 N/A synthetic
    construct
    32630    		 8700212 Assembly1
    AMP:A:41 8,10~12,17~18,34
    2 1raw:A

    		 36 N/A URS000080E162 N/A synthetic
    construct
    32630    		 8756406 Assembly1
    AMP:A:37 7~8,10~11,17~19,30
    3 6tb7:A
    (2.53Å)
    		 52 N/A URS00021ED92A RF03013 Candidatus
    Koribacter
    versatilis
    Ellin345
    204669    		 32295864 Assembly1
    AMP:A:101 6~8,47~48
    4 6ymi:A
    (2.5Å)
    		 25 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly1
    AMP:A:102 14,24~26
    AMP:A:103 15~16,23~24
    5 6ymi:C
    (2.5Å)
    		 25 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly2
    AMP:C:102 15~16,23~24
    6 6ymi:F
    (2.5Å)
    		 25 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly3
    AMP:F:102 15~16,23~24
    AMP:G:101 14,24~26
    7 6ymi:I
    (2.5Å)
    		 25 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly4
    AMP:I:102 15~16,23~24
    8 6ymi:M
    (2.5Å)
    		 25 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly5
    AMP:M:102 15~16,23~24
    AMP:N:101 14,24~26
    9 6ymi:O
    (2.5Å)
    		 26 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly6
    AMP:O:201 15~16,23~24
    10 6yml:A
    (2.17Å)
    		 26 N/A URS0001A24B50 N/A Roseobacter
    sp.
    1907202    		 32520325 Assembly1
    AMP:A:101 14,24~26
    11 8sx6:B
    (1.45Å)
    		 14 N/A N/A N/A synthetic
    construct
    32630    		 37920395 Assembly1
    AMP:B:102 1~2
    12 8sxl:A
    (1.9Å)
    		 14 N/A URS0002681414 N/A synthetic
    construct
    32630    		 37920395 Assembly1
    AMP:A:101 2~3
    13 8sxl:B
    (1.9Å)
    		 14 N/A URS0002681414 N/A synthetic
    construct
    32630    		 37920395 Assembly1
    AMP:B:101 2~3
    AMP:B:102 1~2
    << < 1 > >>
    Go to page

    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.