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FURNA
Download all results in tab-seperated text for 19 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 3ovb:C
    (1.95Å)

    35 N/A URS000080E1A6 N/A synthetic
    construct

    32630
    21071662 Assembly1
    ATP:A:501 32,34~35
    ATP:C:851 14,16~17,19
    2 3ovb:D
    (1.95Å)

    35 N/A URS000080E1A6 N/A synthetic
    construct

    32630
    21071662 Assembly1
    ATP:B:502 33~35
    3 6tf2:A
    (2.55Å)

    52 N/A URS00021ED92A RF03013 Candidatus
    Koribacter
    versatilis
    Ellin345

    204669
    32295864 Assembly1
    ATP:A:109 6~8,47~48
    4 7d7y:A
    (2.8Å)

    51 N/A URS00021ED902 RF03013 synthetic
    construct

    32630
    33170270 Assembly1
    ATP:A:102 6~8,47~48
    5 7n1p:23
    (2.33Å)

    2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002311982 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    34234344 Assembly1
    ATP:23:3001 2394~2395,2421~2422
    ATP:23:3002 39~40,440~441
    ATP:23:3003 369,404
    6 7n2c:23
    (2.72Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    34234344 Assembly1
    ATP:23:3001 39~40,440~441
    ATP:23:3002 369,404
    7 7n2u:23
    (2.53Å)

    2902 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    34234344 Assembly1
    ATP:23:3001 39~40,440~441
    ATP:23:3002 368~369,404~405
    8 7n2v:23
    (2.54Å)

    2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    34234344 Assembly1
    ATP:23:3002 39~40,440~441
    ATP:23:3003 369,404
    9 7n30:23
    (2.66Å)

    2901 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    34234344 Assembly1
    ATP:23:3001 39~40,440~441
    ATP:23:3002 367~369,404
    10 7n31:23
    (2.69Å)

    2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    34234344 Assembly1
    ATP:23:3001 39~40,440~441
    ATP:23:3002 369,404
    11 7orj:T
    (3.9Å)

    17 N/A URS00023358F9 N/A 2560547 35173159 Assembly1
    ATP:A:2302 22~23
    12 7ork:T
    (3.1Å)

    18 N/A URS00023358F9 N/A La
    Crosse
    virus

    11577
    35173159 Assembly1
    ATP:A:2304 22~23
    13 7orn:T
    (2.8Å)

    18 N/A URS00023358F9 N/A 2560547 35173159 Assembly1
    ATP:A:2301 22~23
    14 7otc:A
    (2.9Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00023358D7 RF02540
    RF02541
    Escherichia
    coli
    BL21(DE3)

    469008
    35500116 Assembly1
    ATP:A:3001 369,404
    15 7uo7:T
    (3.09Å)

    34 N/A URS00026177A0 N/A synthetic
    construct

    32630
    36725929 Assembly1
    ATP:A:1001 20~21
    16 8peg:7
    (3.3Å)

    2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Escherichia
    coli

    562
    38409277 Assembly1
    ATP:7:3193 39~40,440~441
    ATP:7:3194 369,404
    17 8qyx:A2
    (1.78Å)

    3706 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02543
    RF02541
    Homo
    sapiens

    9606
    39658079
    M054_0.6

    1306

    769

    706

    1303

    762

    872

    1148

    1149

    764

    167

    21

    1079

    930

    1029

    1075

    1072

    1073

    s77

    1071

    819

    1373

    938

    1375

    s52

    s50

    931

    M272_0.6

    936

    s59

    995

    994

    595

    1314

    991

    1312

    1311

    1028

    1150

    123

    124

    125

    1068

    s72

    1060

    s100

    s102

    52

    533

    M227_0.6

    1384

    375

    926

    822

    1128

    988

    1321

    708

    705

    1328

    707

    1124

    987

    1126

    703

    M077_0.6

    1237

    83

    1181

    797

    796

    795

    836

    837

    791

    790

    838

    1334

    s70

    1016

    1017

    1393

    610

    1012

    1013

    1236

    M290_0.6

    763

    1231

    1232

    1233

    1335

    s17

    M109_0.6

    1336

    1331

    1239

    1333

    589

    776

    s96

    s99

    M273_0.6

    1389

    902

    821

    900

    901

    906

    905

    33

    s48

    970

    M044_0.6

    1245

    s62

    s61

    1227

    883

    M035_0.6

    1223

    M156_0.6

    604

    M320_0.6

    1347

    60

    s81

    M349_0.6

    1083

    175

    977

    976

    974

    852

    853

    M154_0.6

    884

    s55

    979

    M153_0.6

    183

    1238

    185

    546

    815

    1036

    503

    1034

    1035

    1212

    M102_0.6

    1211

    1216

    1042

    986

    467

    M148_0.6

    1354

    M103_0.6

    169

    91

    1127

    M070_0.6

    1026

    M020_0.6

    M050_0.6

    1187

    1182

    1183

    1037

    727

    M347_0.6

    722

    935

    M086_0.6

    1164

    1165

    1166

    606

    886

    156

    748

    749

    608

    M061_0.6

    958

    1055

    878

    879

    1059

    953

    952

    42

    954

    957

    1107

    1352

    774

    1215

    M104_0.6

    1173

    770

    773

    1271

    1272

    1273

    779

    778

    1178

    M151_0.6

    78

    1285

    M083_0.6

    1041

    1040

    1043

    1045

    1044

    1288

    354

    1360

    684

    800

    1368
    Assembly1
    ATP:A2:5418 4341~4342,4370~4372
    18 9fsf:2
    (2.8Å)

    1451 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF01959
    RF00177
    RF01960
    RF02542
    Saccharolobus
    solfataricus
    P2

    273057
    39753558 Assembly1
    ATP:5:102 889,1455
    19 9fsf:4
    (2.8Å)

    77 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Escherichia
    coli

    562
    39753558 Assembly1
    ATP:5:102 36~37
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
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