FURNA

Download all results in tab-seperated text for 19 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	4m2z:C (2.85Å)	27	N/A	URS000080DEBF	N/A	synthetic construct 32630	24274754		Assembly1 C:C:103 2,26
2	4m2z:D (2.85Å)	27	N/A	URS000080DEBF	N/A	synthetic construct 32630	24274754		Assembly1 C:D:103 2,26
3	5tga:1 (3.3Å)	3149	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000A7632E	RF02540 RF02543	Saccharomyces cerevisiae 4932	27827794	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 C:1:3401 2923~2924 C:1:3402 2876,2922
4	5tga:5 (3.3Å)	3150	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000A7632E	RF02540 RF02543	Saccharomyces cerevisiae 4932	27827794	M107_0.6 M080_0.6 M299_0.6 16	Assembly2 C:5:3401 2923~2924 C:5:3402 2876,2922
5	6u7y:A (2.95Å)	22	N/A	URS00021ED93B	N/A	synthetic construct 32630	33347562		Assembly1 C:A:101 14~15,22
6	6u7z:A (2.71Å)	22	N/A	URS00021ED93B	N/A	synthetic construct 32630	33347562		Assembly1 C:A:101 14,22
7	7oic:A (3.1Å)	1383	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00023119E2	RF02541 RF02540	Homo sapiens 9606	34315873	591 590 M269_0.6 1165 1328 1201 M019_0.6 495 175 1199 693 M106_0.6 1191 1193 156 M161_0.6 43 161 1395 M272_0.6 M013_0.6 M081_0.6 1075 996 M087_0.6 1353 1334 s25 1239 M350_0.6 s14 s93 74 M111_0.6 104 M043_0.6 120 800 M088_0.6 1289 s44 1364 s41 1100 1246 1385 M148_0.6 M016_0.6 s60 s61	Assembly1 C:A:1673 1231,1239
8	7pd3:A (3.4Å)	1280	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002311A1E	RF02541 RF02540	Homo sapiens 9606	34609277	591 1165 M269_0.6 156 M013_0.6 1228 M089_0.6 1199 693 1191 1075 M111_0.6 1271 1395 M272_0.6 1328 M081_0.6 1310 1353 1334 M148_0.6 1239 M350_0.6 s14 74 161 s25 1289 s44 1100 1246 1385 687 800 s60 s61	Assembly1 C:A:3313 2232,3002~3003 C:A:3314 2232,2978,3001~3002 C:A:3317 2940,2994 C:A:3323 2996~2997 C:A:3339 2925~2926 C:A:3342 2506,2646 C:A:3348 2719~2720 C:A:3352 2685,2716~2717
9	7zta:23S1 (2.7Å)	2903	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02541	Escherichia coli K-12 83333	37322159		Assembly1 C:23S1:3002 2554~2555 C:23S1:3003 2507,2553 C:23S1:3005 1850~1851,1892~1893
10	7zta:ATR1 (2.7Å)	68	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS000003E908	N/A	Escherichia coli K-12 83333	37322159		Assembly1 C:23S1:3001 18,74~75
11	7zta:ETR1 (2.7Å)	68	GO:0030533 (F) triplet codon-amino aci... GO:0006412 (P) translation	URS00004FF598	RF00005	Escherichia coli K-12 83333	37322159		Assembly1 C:23S1:3005 2,92~93
12	8evr:A1 (2.87Å)	3198	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681478	RF02543	Saccharomyces cerevisiae 4932	37595043	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 C:A1:3403 2259~2260
13	8evr:B5 (2.87Å)	1173	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681484	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	37595043	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 C:Bf:201 1184,1186 C:B5:1806 1188~1189 C:B5:1812 1183~1184 C:B5:1832 1185~1186 C:B5:1834 1178~1179 C:B5:1845 1170~1171 C:B5:1852 1159,1165 C:B5:1853 1158,1164~1165 C:B5:1858 1156~1157 C:B5:1863 1154~1155 C:B5:1864 1153~1154 C:B5:1875 1147~1148 C:B5:1907 1112~1113
14	8evr:EC (2.87Å)	191	N/A	URS000268147B	N/A	Taura syndrome virus 142102	37595043		Assembly1 C:EC:7005 6908~6909
15	8evs:A1 (2.62Å)	3198	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681472	RF02543	Saccharomyces cerevisiae 4932	37595043	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 C:A1:3401 2255,2262 C:A1:3403 2258~2259
16	8evs:B5 (2.62Å)	1173	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681484	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	37595043	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 C:BQ:226 1168,1174~1175 C:B5:1805 1176,1188 C:B5:1811 1184,1186 C:B5:1812 1183~1184 C:B5:1835 1185~1186 C:B5:1847 1170~1171 C:B5:1854 1159,1165~1166 C:B5:1855 1158,1164~1165 C:B5:1860 1156~1157,1160 C:B5:1865 1154~1155 C:B5:1866 1153~1154 C:B5:1873 1146~1147 C:B5:1877 1147~1148 C:EC:7001 1178~1179
17	8evs:EC (2.62Å)	195	N/A	URS000268147B	N/A	Saccharomyces cerevisiae 4932	37595043		Assembly1 C:EC:7002 6905,6952
18	8evt:A1 (2.2Å)	3192	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681478	RF02543	Saccharomyces cerevisiae 4932	37595043	M107_0.6 M080_0.6 M299_0.6 16	Assembly1 C:A1:3402 2255,2262 C:A1:3404 2258~2260
19	8evt:B5 (2.2Å)	1173	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0002681484	RF01960 RF02542 RF01959 RF00177	Saccharomyces cerevisiae 4932	37595043	101 441 M080_0.6 386 M107_0.6 497 490	Assembly1 C:BO:202 978~979 C:BS:203 1178~1179 C:B5:1805 1176,1188 C:B5:1811 1184,1186 C:B5:1812 1183~1184 C:B5:1840 1185~1186 C:B5:1857 1159,1165~1166 C:B5:1858 1158,1164~1165 C:B5:1862 1156~1157 C:B5:1868 1154~1155 C:B5:1869 1153~1154

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.