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FURNA
Download all results in tab-seperated text for 19 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 4m2z:C
    (2.85Å)
    		 27 N/A URS000080DEBF N/A synthetic
    construct
    32630    		 24274754 Assembly1
    C:C:103 2,26
    2 4m2z:D
    (2.85Å)
    		 27 N/A URS000080DEBF N/A synthetic
    construct
    32630    		 24274754 Assembly1
    C:D:103 2,26
    3 5tga:1
    (3.3Å)
    		 3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    C:1:3401 2923~2924
    C:1:3402 2876,2922
    4 5tga:5
    (3.3Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632E RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    4932    		 27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly2
    C:5:3401 2923~2924
    C:5:3402 2876,2922
    5 6u7y:A
    (2.95Å)
    		 22 N/A URS00021ED93B N/A synthetic
    construct
    32630    		 33347562 Assembly1
    C:A:101 14~15,22
    6 6u7z:A
    (2.71Å)
    		 22 N/A URS00021ED93B N/A synthetic
    construct
    32630    		 33347562 Assembly1
    C:A:101 14,22
    7 7oic:A
    (3.1Å)
    		 1383 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023119E2 RF02541
    RF02540    		 Homo
    sapiens
    9606    		 34315873
    591

    590

    M269_0.6

    1165

    1328

    1201

    M019_0.6

    495

    175

    1199

    693

    M106_0.6

    1191

    1193

    156

    M161_0.6

    43

    161

    1395

    M272_0.6

    M013_0.6

    M081_0.6

    1075

    996

    M087_0.6

    1353

    1334

    s25

    1239

    M350_0.6

    s14

    s93

    74

    M111_0.6

    104

    M043_0.6

    120

    800

    M088_0.6

    1289

    s44

    1364

    s41

    1100

    1246

    1385

    M148_0.6

    M016_0.6

    s60

    s61    		 Assembly1
    C:A:1673 1231,1239
    8 7pd3:A
    (3.4Å)
    		 1280 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002311A1E RF02541
    RF02540    		 Homo
    sapiens
    9606    		 34609277
    591

    1165

    M269_0.6

    156

    M013_0.6

    1228

    M089_0.6

    1199

    693

    1191

    1075

    M111_0.6

    1271

    1395

    M272_0.6

    1328

    M081_0.6

    1310

    1353

    1334

    M148_0.6

    1239

    M350_0.6

    s14

    74

    161

    s25

    1289

    s44

    1100

    1246

    1385

    687

    800

    s60

    s61    		 Assembly1
    C:A:3313 2232,3002~3003
    C:A:3314 2232,2978,3001~3002
    C:A:3317 2940,2994
    C:A:3323 2996~2997
    C:A:3339 2925~2926
    C:A:3342 2506,2646
    C:A:3348 2719~2720
    C:A:3352 2685,2716~2717
    9 7zta:23S1
    (2.7Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    K-12
    83333    		 37322159 Assembly1
    C:23S1:3002 2554~2555
    C:23S1:3003 2507,2553
    C:23S1:3005 1850~1851,1892~1893
    10 7zta:ATR1
    (2.7Å)
    		 68 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS000003E908 N/A Escherichia
    coli
    K-12
    83333    		 37322159 Assembly1
    C:23S1:3001 18,74~75
    11 7zta:ETR1
    (2.7Å)
    		 68 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation    		 URS00004FF598 RF00005 Escherichia
    coli
    K-12
    83333    		 37322159 Assembly1
    C:23S1:3005 2,92~93
    12 8evr:A1
    (2.87Å)
    		 3198 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681478 RF02543 Saccharomyces
    cerevisiae
    4932    		 37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    C:A1:3403 2259~2260
    13 8evr:B5
    (2.87Å)
    		 1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681484 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    C:Bf:201 1184,1186
    C:B5:1806 1188~1189
    C:B5:1812 1183~1184
    C:B5:1832 1185~1186
    C:B5:1834 1178~1179
    C:B5:1845 1170~1171
    C:B5:1852 1159,1165
    C:B5:1853 1158,1164~1165
    C:B5:1858 1156~1157
    C:B5:1863 1154~1155
    C:B5:1864 1153~1154
    C:B5:1875 1147~1148
    C:B5:1907 1112~1113
    14 8evr:EC
    (2.87Å)
    		 191 N/A URS000268147B N/A Taura
    syndrome
    virus
    142102    		 37595043 Assembly1
    C:EC:7005 6908~6909
    15 8evs:A1
    (2.62Å)
    		 3198 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681472 RF02543 Saccharomyces
    cerevisiae
    4932    		 37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    C:A1:3401 2255,2262
    C:A1:3403 2258~2259
    16 8evs:B5
    (2.62Å)
    		 1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681484 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    C:BQ:226 1168,1174~1175
    C:B5:1805 1176,1188
    C:B5:1811 1184,1186
    C:B5:1812 1183~1184
    C:B5:1835 1185~1186
    C:B5:1847 1170~1171
    C:B5:1854 1159,1165~1166
    C:B5:1855 1158,1164~1165
    C:B5:1860 1156~1157,1160
    C:B5:1865 1154~1155
    C:B5:1866 1153~1154
    C:B5:1873 1146~1147
    C:B5:1877 1147~1148
    C:EC:7001 1178~1179
    17 8evs:EC
    (2.62Å)
    		 195 N/A URS000268147B N/A Saccharomyces
    cerevisiae
    4932    		 37595043 Assembly1
    C:EC:7002 6905,6952
    18 8evt:A1
    (2.2Å)
    		 3192 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681478 RF02543 Saccharomyces
    cerevisiae
    4932    		 37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16    		 Assembly1
    C:A1:3402 2255,2262
    C:A1:3404 2258~2260
    19 8evt:B5
    (2.2Å)
    		 1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0002681484 RF01960
    RF02542
    RF01959
    RF00177    		 Saccharomyces
    cerevisiae
    4932    		 37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490    		 Assembly1
    C:BO:202 978~979
    C:BS:203 1178~1179
    C:B5:1805 1176,1188
    C:B5:1811 1184,1186
    C:B5:1812 1183~1184
    C:B5:1840 1185~1186
    C:B5:1857 1159,1165~1166
    C:B5:1858 1158,1164~1165
    C:B5:1862 1156~1157
    C:B5:1868 1154~1155
    C:B5:1869 1153~1154
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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