SEQ2FUN

FURNA
Download all results in tab-seperated text for 9 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 5j4b:1A
    (2.6Å)

    2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02540
    RF02541
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly1
    CPT:1A:4177 26~27,534
    CPT:1A:4178 451~452
    CPT:1A:4179 1651~1652
    CPT:1A:4180 1877,1879~1880
    CPT:1A:4181 2232~2233
    CPT:1A:4182 2543~2544
    2 5j4b:1a
    (2.6Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly1
    CPT:1a:1883 1300,1333~1334
    3 5j4b:1v
    (2.6Å)

    13 N/A N/A N/A synthetic
    construct

    32630
    27079977 Assembly1
    CPT:1a:1882 15~16
    4 5j4b:2A
    (2.6Å)

    2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02540
    RF02541
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly2
    CPT:2A:3914 26~27,509
    CPT:2A:3915 424~425
    CPT:2A:3916 1305~1306,1605~1606
    CPT:2A:3917 1846,1848~1849
    CPT:2A:3918 2220~2221
    CPT:2A:3919 2531~2532
    5 5j4c:1A
    (2.8Å)

    2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02540
    RF02541
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly1
    CPT:1A:4209 1877,1879
    CPT:1A:4210 2543~2544
    6 5j4c:1a
    (2.8Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly1
    CPT:1a:1930 789~790
    7 5j4c:1v
    (2.8Å)

    13 N/A N/A N/A synthetic
    construct

    32630
    27079977 Assembly1
    CPT:1a:1930 15~16
    8 5j4c:2A
    (2.8Å)

    2800 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02540
    RF02541
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly2
    CPT:2A:3903 1846,1848~1849
    CPT:2A:3904 2531~2532
    9 5j4c:2a
    (2.8Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    27079977 Assembly2
    CPT:2a:3235 789~790
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.