FURNA

Download all results in tab-seperated text for 26 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	Ligand & binding nucleotides
1	1jzy:A (3.5Å)	2774	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DEF1	RF02540 RF02541	Deinococcus radiodurans 1299	11677599	Assembly1 ERY:A:2881 2041~2042,2045,2484,2588~2590
2	1yi2:0 (2.65Å)	2754	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E07C	RF02540 RF00002	Haloarcula marismortui 2238	15851032	Assembly1 ERY:0:9000 839,2099~2100,2538,2540,2645~2 646
3	3j5l:A (6.6Å)	2853	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02540 RF02541	Escherichia coli K-12 83333	24662426	Assembly1 ERY:A:9000 2058~2059,2610~2611
4	3j7z:A (3.9Å)	2854	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02540 RF02541	Escherichia coli K-12 83333	25306253	Assembly1 ERY:A:9000 2058~2059,2062,2505,2610~2611
5	4v7u:BA (3.1Å)	2854	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00004B0F34	RF02540 RF02541	Escherichia coli 562	20876128	Assembly1 ERY:BA:3136 2058~2059,2062,2610~2611
6	4v7x:BA (3.0Å)	2725	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25D	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	20876130	Assembly1 ERY:BA:3364 746,2058~2059,2062,2503,2505,2 610~2611
7	4v7x:DA (3.0Å)	2725	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25D	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	20876130	Assembly2 ERY:DA:3330 746,2058~2059,2062,2505,2610~2 611
8	4wfn:X (3.54Å)	2680	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DEF1	RF02540 RF02541	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 243230	28689968	Assembly1 ERY:X:2902 759,2041,2484,2589~2590
9	5jte:BA (3.6Å)	2897	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000A7632D	RF02540 RF02541	Escherichia coli 562	27380950	Assembly1 ERY:BA:9000 2058~2059,2505,2610~2611
10	5ju8:BA (3.6Å)	2897	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02540 RF02541	Escherichia coli K-12 83333	27380950	Assembly1 ERY:BA:9000 2058~2059,2505,2610~2611
11	6nd6:1A (2.85Å)	2871	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	30733327	Assembly1 ERY:1A:4074 746,2058~2059,2062,2503,2505,2 610~2611
12	6nd6:2A (2.85Å)	2800	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	30733327	Assembly2 ERY:2A:3875 746,2058,2062,2505,2610~2611
13	6s0x:A (2.425Å)	2905	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000EEACE5	RF02540 RF02541 RF00002	Staphylococcus aureus 1280	31391518	Assembly1 ERY:A:3001 2084~2086,2089,2530,2637~2638
14	6s0z:A (2.3Å)	2905	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000EEACE5	RF02540 RF02541 RF00002	Staphylococcus aureus 1280	31391518	Assembly1 ERY:A:3001 2085~2086,2089,2638
15	6xhx:1A (2.55Å)	2872	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	33462493	Assembly1 ERY:1A:4021 746,2058~2059,2062,2503,2505,2 610~2611
16	6xhx:2A (2.55Å)	2867	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02540 RF02541 RF00002	Thermus thermophilus HB8 300852	33462493	Assembly2 ERY:2A:3734 746,2058~2059,2062,2503,2505,2 610~2611
17	7b5k:A (2.9Å)	2897	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000A7632D	RF02540 RF02541	Escherichia coli K-12 83333	N/A	Assembly1 ERY:A:3237 2058~2059,2503,2610~2611
18	7nso:A (2.9Å)	2903	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02540 RF02541	Escherichia coli 562	34294725	Assembly1 ERY:7:101 746,2058,2062,2503,2505,2610~2 611
19	7nsp:A (3.5Å)	2903	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02540 RF02541	Escherichia coli 562	34294725	Assembly1 ERY:7:101 2058,2062,2505,2611
20	7q4k:BA (3.0Å)	2897	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E25C	RF02541	Escherichia coli 562	37393329	Assembly1 ERY:BA:3001 2058~2059,2062,2503,2611
21	8fc1:1A (2.5Å)	2872	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02541	Thermus thermophilus HB8 300852	37452045	Assembly1 ERY:1A:4042 746,2058~2059,2062,2503,2505,2 610~2611
22	8fc1:2A (2.5Å)	2867	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02541	Thermus thermophilus HB8 300852	37452045	Assembly2 ERY:2A:3732 746,2058~2059,2062,2503,2505,2 610~2611
23	8fc4:1A (2.45Å)	2872	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02541	Thermus thermophilus HB8 300852	37452045	Assembly1 ERY:1A:4027 746,2058~2059,2062,2503,2505,2 611
24	8fc4:2A (2.45Å)	2867	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00001698E8	RF02541	Thermus thermophilus HB8 300852	37452045	Assembly2 ERY:2A:3672 746,2058~2059,2062,2503,2505,2 610~2611
25	8vr4:A (2.8Å)	3118	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02540 RF02541 RF02543 RF00002	Mycolicibacterium smegmatis MC2 155 246196	39913204	Assembly1 ERY:A:3201 861,2282~2283,2727,2729,2834~2 835
26	8xz3:A (3.6Å)	3119	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF02541	Mycolicibacterium smegmatis MC2 155 246196	39029461	Assembly1 ERY:A:3201 861,2282~2283,2286,2834~2835

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.