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FURNA
Download all results in tab-seperated text for 17 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 1nyi:A
    (2.85Å)

    16 N/A URS000080DF69 N/A synthetic
    construct

    32630
    12948485 Assembly1
    G:A:500 11,26
    2 5l00:A
    (1.25Å)

    15 N/A N/A N/A synthetic
    construct

    32630
    28058281 Assembly1
    G:A:102 1~2
    3 5l00:B
    (1.25Å)

    15 N/A N/A N/A synthetic
    construct

    32630
    28058281 Assembly1
    G:A:101 1~2
    4 5l00:C
    (1.25Å)

    15 N/A N/A N/A synthetic
    construct

    32630
    28058281 Assembly2
    G:C:103 1~2
    5 5l00:D
    (1.25Å)

    15 N/A N/A N/A synthetic
    construct

    32630
    28058281 Assembly2
    G:C:102 1~2
    6 6cab:A
    (2.5Å)

    14 N/A N/A N/A synthetic
    construct

    32630
    29851379 Assembly1
    G:A:102 1~2
    G:B:102 2~3
    7 6cab:B
    (2.5Å)

    14 N/A N/A N/A synthetic
    construct

    32630
    29851379 Assembly1
    G:A:101 2~3
    G:B:101 1~2
    8 6i9r:A
    (3.9Å)

    1501 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B39 RF02541
    RF02540
    Homo
    sapiens

    9606
    33910005
    591

    590

    M269_0.6

    1165

    1328

    1228

    M019_0.6

    175

    1199

    693

    M106_0.6

    156

    1191

    1075

    M161_0.6

    43

    M111_0.6

    1271

    1395

    M272_0.6

    M013_0.6

    M081_0.6

    994

    996

    M087_0.6

    1310

    1353

    1334

    M148_0.6

    564

    1239

    M350_0.6

    s93

    74

    161

    M043_0.6

    800

    s25

    33

    M088_0.6

    1289

    s44

    1364

    s41

    1100

    1246

    1385

    M016_0.6

    s60
    Assembly1
    G:A:3429 1672,1817~1818
    9 7pd3:A
    (3.4Å)

    1280 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002311A1E RF02541
    RF02540
    Homo
    sapiens

    9606
    34609277
    591

    1165

    M269_0.6

    156

    M013_0.6

    1228

    M089_0.6

    1199

    693

    1191

    1075

    M111_0.6

    1271

    1395

    M272_0.6

    1328

    M081_0.6

    1310

    1353

    1334

    M148_0.6

    1239

    M350_0.6

    s14

    74

    161

    s25

    1289

    s44

    1100

    1246

    1385

    687

    800

    s60

    s61
    Assembly1
    G:A:3307 3035~3036
    G:A:3311 3004,3007,3033
    G:A:3318 2999~3000
    G:A:3332 1993~1994,2503,2505
    G:A:3344 2502~2503
    G:A:3382 3011~3012,3026~3027
    10 8evr:A1
    (2.87Å)

    3198 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681478 RF02543 Saccharomyces
    cerevisiae

    4932
    37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    G:A1:3416 2303~2304
    G:A1:3421 2263~2264
    11 8evr:B5
    (2.87Å)

    1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681484 RF01960
    RF02542
    RF01959
    RF00177
    Saccharomyces
    cerevisiae

    4932
    37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly1
    G:BO:203 977~978
    G:BO:204 1026~1027
    G:BT:257 1173~1174
    G:B5:1807 1187~1188
    G:B5:1808 1186~1187
    G:B5:1833 1180~1181,1185
    G:B5:1835 1177~1178
    G:B5:1837 1175~1176
    G:B5:1839 1173~1174
    G:B5:1861 1156~1157
    G:B5:1868 1148~1149
    G:B5:1886 406~407
    G:B5:1887 392~393
    G:B5:1920 978,1024~1025
    G:B5:1923 992~993
    G:B5:1926 979,992
    G:B5:1928 1026,1028,1030
    12 8evs:A1
    (2.62Å)

    3198 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681472 RF02543 Saccharomyces
    cerevisiae

    4932
    37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    G:A1:3419 2303~2304
    G:A1:3422 2255~2256
    G:A1:3425 2262~2263
    13 8evs:B5
    (2.62Å)

    1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681484 RF01960
    RF02542
    RF01959
    RF00177
    Saccharomyces
    cerevisiae

    4932
    37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly1
    G:BT:255 1173~1174
    G:B5:1806 1187~1188
    G:B5:1822 12~13
    G:B5:1836 1180~1181,1185
    G:B5:1837 1177~1178
    G:B5:1839 1175~1176
    G:B5:1840 1173~1174
    G:B5:1863 1156~1157
    G:B5:1870 1148~1149
    G:B5:1890 392~393
    G:B5:1922 978,1024~1025
    G:B5:1924 992~993
    G:B5:1926 979,991~992
    G:B5:1927 977~978
    G:B5:1928 1026~1027
    G:B5:1930 1026,1028,1030
    G:An:112 993~994
    14 8evt:A1
    (2.2Å)

    3192 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681478 RF02543 Saccharomyces
    cerevisiae

    4932
    37595043
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    G:A1:3420 2303~2304
    G:A1:3422 2255~2256
    G:A1:3425 2262~2263
    15 8evt:B5
    (2.2Å)

    1173 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0002681484 RF01960
    RF02542
    RF01959
    RF00177
    Saccharomyces
    cerevisiae

    4932
    37595043
    101

    441

    M080_0.6

    386

    M107_0.6

    497

    490
    Assembly1
    G:BO:201 979,992
    G:B5:1806 1187~1188
    G:B5:1807 1186~1187
    G:B5:1824 12~13
    G:B5:1839 1184~1185
    G:B5:1841 1180~1181,1185
    G:B5:1842 1177~1178
    G:B5:1844 1175~1176
    G:B5:1845 1173~1174
    G:B5:1851 1169~1170
    G:B5:1860 1173~1174
    G:B5:1866 1156~1157
    G:B5:1873 1148~1149
    G:B5:1892 406~407
    G:B5:1893 392~393
    G:B5:1927 1024~1025
    G:B5:1929 992~993
    G:B5:1934 977~978
    G:B5:1935 1026~1027
    G:B5:1937 1026,1028,1030
    16 8sx6:A
    (1.45Å)

    14 N/A N/A N/A synthetic
    construct

    32630
    37920395 Assembly1
    G:B:103 2~3
    17 8sx6:B
    (1.45Å)

    14 N/A N/A N/A synthetic
    construct

    32630
    37920395 Assembly1
    G:B:101 2~3
    << < 1 > >>
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
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