SEQ2FUN

FURNA
Download all results in tab-seperated text for 24 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 2nz4:E
    (2.498Å)
    		 13 N/A URS000080E2F9 N/A Bacillus
    anthracis
    1392    		 17196404 Assembly1
    GLP:P:5001 1~2
    2 2nz4:F
    (2.498Å)
    		 13 N/A URS000080E2F9 N/A Bacillus
    anthracis
    1392    		 17196404 Assembly2
    GLP:F:5002 1~2
    3 2nz4:G
    (2.498Å)
    		 13 N/A URS000080E2F9 N/A Bacillus
    anthracis
    1392    		 17196404 Assembly3
    GLP:G:5003 1~2
    4 2nz4:H
    (2.498Å)
    		 13 N/A URS000080E2F9 N/A Bacillus
    anthracis
    1392    		 17196404 Assembly4
    GLP:H:5004 1~2
    5 2nz4:P
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly1
    GLP:P:5001 42~43,57
    6 2nz4:Q
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly2
    GLP:F:5002 42~43,57~58
    7 2nz4:R
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly3
    GLP:G:5003 42~43,57
    8 2nz4:S
    (2.498Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 Bacillus
    anthracis
    1392    		 17196404 Assembly4
    GLP:H:5004 42~43,57
    9 2z75:A
    (1.7Å)
    		 21 N/A URS000080E125 N/A Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    MB4
    273068    		 17804015 Assembly1
    GLP:A:201 1~2
    10 2z75:B
    (1.7Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080DF18 RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    MB4
    273068    		 17804015 Assembly1
    GLP:A:201 50,65~66
    11 3b4a:A
    (2.7Å)
    		 22 N/A URS000080DE3A N/A Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    GLP:A:401 1~2
    12 3b4a:B
    (2.7Å)
    		 122 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E06F RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    GLP:A:401 51,65
    13 3b4b:A
    (2.7Å)
    		 20 N/A URS000080E25B N/A Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    GLP:A:201 1~2
    14 3b4b:B
    (2.7Å)
    		 123 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E06F RF00234 Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    GLP:A:201 65~66
    15 3b4c:A
    (3.0Å)
    		 20 N/A URS000080E25B N/A Caldanaerobacter
    subterraneus
    subsp.
    tengcongensis
    119072    		 17990888 Assembly1
    GLP:A:201 1~2
    16 3g8t:E
    (3.0Å)
    		 13 N/A URS000080E2F9 N/A synthetic
    construct
    32630    		 19228039 Assembly1
    GLP:E:5001 1~2
    17 3g8t:F
    (3.0Å)
    		 13 N/A URS000080E2F9 N/A synthetic
    construct
    32630    		 19228039 Assembly2
    GLP:Q:5002 1~2
    18 3g8t:H
    (3.0Å)
    		 13 N/A URS000080E2F9 N/A synthetic
    construct
    32630    		 19228039 Assembly4
    GLP:H:5004 1~2
    19 3g8t:P
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly1
    GLP:E:5001 42~43,57~58
    20 3g8t:Q
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly2
    GLP:Q:5002 42~43,57~58
    21 3g8t:R
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly3
    GLP:R:5003 43,57
    22 3g8t:S
    (3.0Å)
    		 141 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E372 RF00234 synthetic
    construct
    32630    		 19228039 Assembly4
    GLP:H:5004 42~43,57
    23 3g9c:E
    (2.9Å)
    		 11 N/A URS000080DF1E N/A synthetic
    construct
    32630    		 19228039 Assembly1
    GLP:E:5001 1~2
    24 3g9c:P
    (2.9Å)
    		 140 GO:0003824 (F) catalytic activity
    GO:0010468 (P) regulation of gene expr...    		 URS000080E011 RF00234 synthetic
    construct
    32630    		 19228039 Assembly1
    GLP:E:5001 42~43,57~58
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.