SEQ2FUN

FURNA
Download all results in tab-seperated text for 16 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 3owi:A
    (2.845Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    MJ-1236
    593588    		 21145485 Assembly1
    GLY:A:89 32,34~36,68~69
    2 3owi:B
    (2.845Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    MJ-1236
    593588    		 21145485 Assembly2
    GLY:B:89 32,34~35,68~69
    3 3oww:A
    (2.802Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly1
    GLY:A:89 32,34~36,68~69,71
    4 3oww:B
    (2.802Å)
    		 87 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly2
    GLY:B:89 32,34~35,68~69
    5 3owz:A
    (2.949Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly1
    GLY:A:89 32,34~36,68~69
    6 3owz:B
    (2.949Å)
    		 83 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly2
    GLY:B:89 32,34~36,68~69
    7 3oxe:A
    (2.899Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly1
    GLY:A:89 32,34~36,68~69
    8 3oxe:B
    (2.899Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly2
    GLY:B:89 32,34~35,68~69
    9 3oxj:A
    (3.2Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly1
    GLY:A:89 32,34~36,68~69
    10 3oxj:B
    (3.2Å)
    		 87 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly2
    GLY:B:89 32,34~36,68~69
    11 3oxm:A
    (2.95Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly1
    GLY:A:89 32,34~36,68~69
    12 3oxm:B
    (2.95Å)
    		 88 GO:0006545 (P) glycine biosynthetic pr... URS000080DF11 RF00504 Vibrio
    cholerae
    666    		 21145485 Assembly2
    GLY:B:89 32,34~36,68~69
    13 3p49:A
    (3.55Å)
    		 169 GO:0006545 (P) glycine biosynthetic pr... URS000080DF90 RF00504 Fusobacterium
    polymorphum
    76857    		 21439473 Assembly1
    GLY:A:745 35,39,49~50
    GLY:A:746 110,114,140~141
    14 4erl:A
    (3.0Å)
    		 161 GO:0009085 (P) lysine biosynthetic pro... URS000080DFA3 RF00168 Thermotoga
    maritima
    2336    		 22771573 Assembly1
    GLY:A:202 8~9,11,112
    15 9aur:R
    (1.57Å)
    		 22 N/A N/A N/A Mus
    musculus
    10090    		 39178230 Assembly1
    GLY:R:101 1,21~22
    16 9aus:R
    (2.07Å)
    		 22 N/A N/A N/A unidentified
    32644    		 39178230 Assembly1
    GLY:R:102 1,20~22
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.