SEQ2FUN

FURNA
Download all results in tab-seperated text for 10 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 3skz:A
    (2.605Å)
    		 68 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...    		 URS000080DE91 RF01510 Mesoplasma
    florum
    2151    		 21841796 Assembly1
    GMP:A:120 30~31,58~59,80~81
    2 3skz:B
    (2.605Å)
    		 68 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...    		 URS000080DE91 RF01510 Mesoplasma
    florum
    2151    		 21841796 Assembly2
    GMP:B:120 30~31,54~55,58~59,80~81
    3 4x4n:B
    (2.953Å)
    		 32 N/A URS000080E2D0 N/A Homo
    sapiens
    9606    		 25640237
    1124    		 Assembly1
    GMP:B:101 15~16
    4 8khh:A
    (2.3Å)
    		 71 N/A URS0003054924 N/A Bacillus
    sp.
    (in:
    firmicutes)
    1409    		 40694847 Assembly1
    GMP:A:101 9~10,36~39,62~63
    5 8khh:B
    (2.3Å)
    		 71 N/A URS0003054924 N/A Bacillus
    sp.
    (in:
    firmicutes)
    1409    		 40694847 Assembly2
    GMP:B:101 9~10,36~39,62~63
    6 9lkf:A
    (2.83Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Paenibacillus
    sp.
    FSL
    E2-0178
    2921361    		 40966503 Assembly1
    GMP:A:101 8~9,36~39,64~65
    7 9lku:X
    (2.74Å)
    		 65 N/A N/A N/A synthetic
    construct
    32630    		 40795954 Assembly1
    GMP:X:101 10~11,37~40,63~64
    8 9uw0:X
    (1.97Å)
    		 65 N/A N/A N/A synthetic
    construct
    32630    		 40795954 Assembly1
    GMP:X:101 10~11,37~40,63~64
    9 9v7n:B
    (3.11Å)
    		 205 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    GMP:B:301 1,126~127,171~172
    10 9v7o:B
    (3.06Å)
    		 205 GO:0000372 (P) Group I intron splicing N/A RF00028 Azoarcus
    olearius
    418699    		 N/A Assembly1
    GMP:B:301 126~127,129,171
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.