SEQ2FUN

FURNA
Download all results in tab-seperated text for 14 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 3ds7:A
    (1.85Å)

    67 GO:0009113 (P) purine nucleobase biosy... URS000080E322 RF00167 synthetic
    construct

    32630
    19007790 Assembly1
    GNG:A:120 21~22,50~52,74~76
    2 3ds7:B
    (1.85Å)

    67 GO:0009113 (P) purine nucleobase biosy... URS000080E322 RF00167 synthetic
    construct

    32630
    19007790 Assembly2
    GNG:B:320 221~222,251~252,274~276
    3 3ski:A
    (2.3Å)

    68 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DE91 RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly1
    GNG:A:120 30~31,56~59,80~82
    4 3ski:B
    (2.3Å)

    68 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DE91 RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly1
    GNG:B:120 30~31,56~59,80~81
    5 3skl:A
    (2.9Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly1
    GNG:A:120 29~30,56~58,79~80
    6 3skl:B
    (2.9Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly2
    GNG:B:120 29~30,55,57~58,79~80
    7 3skr:A
    (3.1Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly1
    GNG:A:120 30~31,59,80
    8 3skr:B
    (3.1Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly2
    GNG:B:120 30~31,56,59,80~81
    9 3skt:A
    (3.1Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly1
    GNG:A:89 30~31,56~59,80~81
    10 3skt:B
    (3.1Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly2
    GNG:B:89 30~31,56~57,59,80~81
    11 3skw:A
    (2.95Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly1
    GNG:A:120 30~31,56~59,80~81
    12 3skw:B
    (2.95Å)

    66 GO:0032546 (F) deoxyribonucleoside bin...
    GO:0031554 (P) regulation of terminati...
    URS000080DEBE RF01510 Mesoplasma
    florum

    2151
    21841796 Assembly2
    GNG:B:120 30~31,56~59,80~81
    13 6p2h:A
    (2.803Å)

    69 GO:0009113 (P) purine nucleobase biosy... URS000197CF6D RF00167 synthetic
    construct

    32630
    31598729 Assembly1
    GNG:A:101 21~22,47~52,78~79
    14 8keb:A
    (2.2Å)

    71 N/A N/A N/A Bacillus
    sp.
    (in:
    firmicutes)

    1409
    N/A Assembly1
    GNG:A:102 9~10,36~39,62~63
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.