SEQ2FUN

FURNA
Download all results in tab-seperated text for 38 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1y27:X
    (2.4Å)
    		 68 GO:0009113 (P) purine nucleobase biosy... URS000080DF8E RF00167 Bacillus
    subtilis
    1423    		 15610857 Assembly1
    GUN:X:101 21~22,47,51~52,74~75
    2 4ybb:DA
    (2.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    K-12
    83333    		 25775265 Assembly1
    GUN:DA:3212 2814,2831
    3 5j5b:DA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    GUN:DA:3210 2814,2831,2884
    4 5j7l:DA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    GUN:DA:3211 2814,2831,2884
    5 5j88:DA
    (3.32Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 27382179 Assembly1
    GUN:DA:3211 2814,2831
    6 5j8a:DA
    (3.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    562    		 27382179 Assembly1
    GUN:DA:3211 2814,2831,2884
    7 5j91:DA
    (2.96Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    GUN:DA:3210 2814,2831,2884
    8 5jc9:DA
    (3.03Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02541 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    GUN:DA:3213 2814,2831,2884
    9 6i7v:DA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02541 Escherichia
    coli
    562    		 30359641 Assembly1
    GUN:DA:3078 2814,2831,2884~2885
    10 6ubu:B
    (1.6Å)
    		 67 GO:0009113 (P) purine nucleobase biosy... URS000080DDA1 RF00167 Bacillus
    subtilis
    1423    		 32414072 Assembly1
    GUN:B:111 21~22,47,51~52,74~75
    11 7q7x:B
    (2.8Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 12~13
    12 7q7x:C
    (2.8Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 38,42~43
    13 7q7y:B
    (2.9Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:103 12~13
    14 7q7y:C
    (2.9Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:103 38,42~43
    15 7q7z:B
    (3.26Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 12~13
    16 7q7z:C
    (3.26Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 38,42~43
    17 7q7z:E
    (3.26Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly2
    GUN:F:101 12~13
    18 7q7z:F
    (3.26Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly2
    GUN:F:101 38,42~43
    19 7q80:B
    (3.14Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 12~13
    20 7q80:C
    (3.14Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 38,42~43
    21 7q80:E
    (3.14Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly2
    GUN:F:101 12~13
    22 7q80:F
    (3.14Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly2
    GUN:F:101 38,42~43
    23 7q81:B
    (2.85Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 12~13
    24 7q81:C
    (2.85Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 38,42~43
    25 7q82:B
    (2.95Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 12~13
    26 7q82:C
    (2.95Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 35301481 Assembly1
    GUN:C:101 38,42~43
    27 7v9e:A
    (2.3Å)
    		 68 N/A URS00023358F0 N/A Homo
    sapiens
    9606    		 35301479
    167    		 Assembly1
    GUN:A:101 10~11,41,45~46,63
    28 8ked:A
    (2.11Å)
    		 71 N/A URS000305492A N/A Bacillus
    sp.
    (in:
    firmicutes)
    1409    		 40694847 Assembly1
    GUN:A:102 9~10,38~39,62~63
    29 8xzo:A
    (1.97Å)
    		 53 GO:0010468 (P) regulation of gene expr... URS00029EB367 RF02977 unidentified
    eubacterium
    clone
    A70
    41312    		 38769061 Assembly1
    GUN:A:202 14,18,21,41~42
    30 8zau:A
    (2.43Å)
    		 69 N/A URS000340222E N/A Homo
    sapiens
    9606    		 39721592
    930

    974

    167

    878

    819    		 Assembly1
    GUN:A:101 10~11,41,45~46,63
    31 9kbr:B
    (2.65Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 N/A Assembly1
    GUN:C:101 12~13
    32 9kbr:C
    (2.65Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 N/A Assembly1
    GUN:C:101 38,42~43
    33 9kfv:B
    (2.82Å)
    		 24 N/A URS00023358C9 N/A synthetic
    construct
    32630    		 N/A Assembly1
    GUN:C:101 12~13
    34 9kfv:C
    (2.82Å)
    		 24 N/A URS00023358B5 N/A synthetic
    construct
    32630    		 N/A Assembly1
    GUN:C:101 38,42~43
    35 9ljn:A
    (2.75Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Paenibacillus
    sp.
    FSL
    E2-0178
    2921361    		 40966503 Assembly1
    GUN:A:101 8~9,34,37~39,64~65
    36 9lkw:X
    (2.28Å)
    		 65 N/A N/A N/A synthetic
    construct
    32630    		 40795954 Assembly1
    GUN:X:101 10~11,39~40,63~64
    37 9lmc:A
    (2.97Å)
    		 71 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Paenibacillus
    sp.
    FSL
    E2-0178
    2921361    		 40966503 Assembly1
    GUN:A:101 8~9,34,38~39,64~65
    38 9lmc:B
    (2.97Å)
    		 70 GO:0009113 (P) purine nucleobase biosy... N/A RF00167 Paenibacillus
    sp.
    FSL
    E2-0178
    2921361    		 40966503 Assembly2
    GUN:B:101 8~9,38~39,64~65
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.