FURNA

Download all results in tab-seperated text for 12 RNAs.

Click the entry in the '#' column to view structure details of that RNA chain.

Hover over PDB to view the title of the structure.

Hover over Rfam to view names of Rfam families.

Hover over PubMed to view title of the PubMed publications.

Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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#	PDB (Resolution)	Length	EC number & GO term	RNAcentral	Rfam	Taxon	PubMed	ATtRACT motif	Ligand & binding nucleotides
1	1hnz:A (3.3Å)	1507	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080E226	RF00177	Thermus thermophilus 274	11163189		Assembly1 HYG:A:1632 1404~1405,1494~1495,1498
2	4lf5:A (3.753Å)	1513	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DE21	RF00177	Thermus thermophilus HB8 300852	N/A		Assembly1 HYG:A:1717 1405~1406,1494~1497,1543~1544
3	4lfa:A (3.6461Å)	1512	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000080DE21	RF00177	Thermus thermophilus HB8 300852	N/A		Assembly1 HYG:A:1716 1405,1494~1498,1543~1544
4	4v64:AA (3.5Å)	1530	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177	Escherichia coli 562	18567815		Assembly1 HYG:AA:2059 1403,1405,1493~1496
5	4v64:CA (3.5Å)	1530	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS00000ABFE9	RF00177	Escherichia coli 562	18567815		Assembly2 HYG:CA:2062 1403,1405,1493~1496
6	6qzp:S2 (2.9Å)	1740	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS0000E60BC9	RF01960	Homo sapiens 9606	29143818	1303 1263 872 1149 1267 764 43 957 692 1079 1075 1072 1073 819 346 546 1378 930 936 935 M296_0.6 1314 M141_0.6 1068 s72 M147_0.6 1060 s102 1384 1386 M016_0.6 821 926 822 1128 1323 988 595 1327 707 986 796 836 762 790 838 1124 1017 1392 1390 1236 1335 1334 M109_0.6 1238 M273_0.6 s14 s96 s99 1311 105 902 900 905 s48 1333 924 1244 s62 s61 M074_0.6 335 60 1167 977 976 974 852 970 1037 1035 1213 756 639 M148_0.6 786 1355 M065_0.6 93 167 M070_0.6 813 M050_0.6 1188 1022 1187 1029 815 727 722 883 604 606 884 749 779 608 996 M037_0.6 1055 878 1059 952 1195 954 870 1380 325 770 610 1274 1042 M127_0.6 s24 804	Assembly1 HYG:S2:2039 1706~1707,1824,1826~1827
7	8cqw:B (3.05Å)	1741	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000059AE3B	RF01960	Candida albicans 5476	N/A		Assembly1 HYG:B:1953 1628~1629,1744~1746
8	8cqw:CM (3.05Å)	1765	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	URS000059AE3B	RF01960	Candida albicans 5476	N/A		Assembly2 HYG:CM:1902 1627~1630,1744~1746
9	9fqz:S2 (2.85Å)	1598	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	N/A	1323 988 M074_0.6 1327 1213 1263 749 1267 43 60 1167 692 974 M037_0.6 1311 878 970 1274 838 1195 346 870 819 639 546 325 1378 930 1393 1392 s59 1390 M296_0.6 1236 756 M141_0.6 1335 779 M109_0.6 M148_0.6 1238 M273_0.6 1011 1355 M065_0.6 s99 872 335 M070_0.6 902 786 813 M147_0.6 M050_0.6 1188 1187 1079 1124 s102 815 1333 924 954 47 1386 M016_0.6 1380 926 804	Assembly1 HYG:S2:1979 1704,1706~1707,1824~1827
10	9i14:S2 (3.34Å)	1577	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	N/A	1323 988 M074_0.6 1327 1213 1263 749 707 1267 43 1167 325 692 974 M037_0.6 1311 878 970 1274 838 1075 1195 346 870 819 639 546 509 930 1393 1392 335 1390 M296_0.6 1236 758 756 M141_0.6 1335 779 M109_0.6 M148_0.6 1238 M273_0.6 1355 M065_0.6 s99 872 M070_0.6 902 786 813 M147_0.6 M050_0.6 1188 1187 1079 788 1124 s102 815 1333 924 954 47 1386 M016_0.6 1380 926 804	Assembly1 HYG:S2:1901 1704,1706~1707,1826~1827
11	9spf:S2 (2.4Å)	1619	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	41535458	1323 988 M074_0.6 1327 1217 1213 1263 749 1267 872 1079 43 1167 325 756 s61 692 974 M037_0.6 1311 878 970 838 1195 346 870 819 639 546 1334 1378 930 1392 s59 1390 M296_0.6 1236 s62 M141_0.6 1335 1274 M109_0.6 M148_0.6 779 M273_0.6 1355 M065_0.6 s99 167 335 M070_0.6 902 786 813 M147_0.6 M050_0.6 1188 1187 1238 1124 s102 815 1333 924 954 1386 M016_0.6 1380 926 804	Assembly1 HYG:S2:2021 1704,1706,1825~1827
12	9spi:S2 (2.4Å)	1562	GO:0003735 (F) structural constituent ... GO:0005840 (C) ribosome	N/A	RF01960 RF02542 RF01959 RF00177	Homo sapiens 9606	41535458	1323 988 M074_0.6 1327 1213 1263 749 1267 1079 43 1167 325 692 974 M037_0.6 1311 878 970 47 838 1195 346 870 819 639 546 1334 930 1392 s59 1390 M296_0.6 1236 756 M141_0.6 1335 1274 M109_0.6 M148_0.6 779 M273_0.6 1355 M065_0.6 s99 872 335 M070_0.6 902 786 813 M147_0.6 M050_0.6 1188 1187 1238 1124 s102 815 1333 924 954 1386 M016_0.6 1380 926 804	Assembly1 HYG:S2:1944 1704,1706~1707,1825~1827

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Reference:

Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.