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FURNA
Download all results in tab-seperated text for 15 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 3d0u:A
    (2.8Å)
    		 161 GO:0009085 (P) lysine biosynthetic pro... URS000080DFA3 RF00168 Thermotoga
    maritima
    2336    		 18593706 Assembly1
    LYS:A:205 8~9,77,111~112,152
    2 3dil:A
    (1.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,79~81,114~115,163
    3 3dim:A
    (2.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,79~80,114~115,163
    4 3dio:X
    (2.4Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:X:175 11~12,80~81,114~115,163
    5 3dix:A
    (2.9Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,80~81,114~115,163
    6 3diy:A
    (2.71Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,80~81,114~115,163
    7 3diz:A
    (2.85Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,79~80,114~115,163
    8 3dj2:A
    (2.5Å)
    		 174 GO:0009085 (P) lysine biosynthetic pro... URS000080E0C5 RF00168 Thermotoga
    maritima
    2336    		 18784651 Assembly1
    LYS:A:175 11~12,80~81,114~115,163
    9 4erl:A
    (3.0Å)
    		 161 GO:0009085 (P) lysine biosynthetic pro... URS000080DFA3 RF00168 Thermotoga
    maritima
    2336    		 22771573 Assembly1
    LYS:A:201 8,77,111~112
    10 5jte:BA
    (3.6Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A7632D RF02540
    RF02541    		 Escherichia
    coli
    562    		 27380950 Assembly1
    LYS:AW:101 2451~2452,2506
    11 8p7x:3
    (3.03Å)
    		 2893 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycoplasmoides
    pneumoniae
    M129
    272634    		 39668257 Assembly1
    LYS:8:103 2500~2501
    12 8p7x:8
    (3.03Å)
    		 76 GO:0030533 (F) triplet codon-amino aci... N/A RF00005 Mycoplasmoides
    pneumoniae
    M129
    272634    		 39668257 Assembly1
    LYS:8:103 75~76
    13 8p7y:3
    (3.7Å)
    		 2893 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycoplasmoides
    pneumoniae
    M129
    272634    		 39668257 Assembly1
    LYS:8:103 2500~2501
    14 8p8b:3
    (2.9Å)
    		 2893 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycoplasmoides
    pneumoniae
    M129
    272634    		 39668257 Assembly1
    LYS:8:103 2500~2501
    15 8p8v:3
    (8.7Å)
    		 2893 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Mycoplasmoides
    pneumoniae
    M129
    272634    		 39668257 Assembly1
    LYS:8:102 2500~2501
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

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