SEQ2FUN

FURNA
Download all results in tab-seperated text for 111 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    101 8t8c:2A
    (2.6Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00001698E8 RF02541 Thermus
    thermophilus
    HB8

    300852
    37433044 Assembly1
    MPD:2A:3735 1772,1976
    MPD:2A:3736 915~916
    102 8t8c:2B
    (2.6Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DEE8 RF00001 Thermus
    thermophilus
    HB8

    300852
    37433044 Assembly1
    MPD:2A:3736 72,101
    103 8vtw:1A
    (2.35Å)

    2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly1
    MPD:1A:3999 422~424
    104 8vtw:1a
    (2.35Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly1
    MPD:1a:1868 346~347
    105 8vtw:2A
    (2.35Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly2
    MPD:2B:219 915~916
    106 8vtw:2B
    (2.35Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly2
    MPD:2B:219 72,101
    107 8vty:1A
    (2.6Å)

    2872 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly1
    MPD:1A:4058 422~424
    108 8vty:1a
    (2.6Å)

    1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00177
    RF01959
    RF02542
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly1
    MPD:1a:1878 346~347
    109 8vty:2A
    (2.6Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02541 Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly2
    MPD:2A:3743 1771~1772,1976
    MPD:2A:3744 2397,2414
    110 8vty:2B
    (2.6Å)

    120 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF00001 Thermus
    thermophilus
    HB8

    300852
    39039256 Assembly2
    MPD:2B:219 72,101
    111 9dfe:2A
    (2.6Å)

    2867 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    N/A RF02540
    RF02541
    RF02543
    RF00002
    Thermus
    thermophilus
    HB8

    300852
    39372947 Assembly2
    MPD:2A:3746 2397~2398,2413
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.