SEQ2FUN

FURNA
Download all results in tab-seperated text for 13 RNAs.
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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 4e8n:A
    (2.96Å)
    		 393 GO:0000373 (P) Group II intron splicing URS000080DE44 RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 23101623 Assembly1
    NH4:A:439 358~359,377
    2 4jrd:A
    (1.0Å)
    		 11 N/A URS000080E35F N/A synthetic
    construct
    32630    		 23813654 Assembly1
    NH4:A:101 2~3
    NH4:A:110 7~8
    NH4:A:111 10~11
    NH4:B:102 3~4
    NH4:B:105 4~5
    3 4jrd:B
    (1.0Å)
    		 11 N/A URS000080E35F N/A synthetic
    construct
    32630    		 23813654 Assembly1
    NH4:A:109 4~5
    NH4:B:102 1~2
    NH4:B:103 5~6
    4 5j02:A
    (3.493Å)
    		 414 GO:0000373 (P) Group II intron splicing URS0000B21DD4 RF02001
    RF01998    		 Oceanobacillus
    iheyensis
    182710    		 27934709 Assembly1
    NH4:A:557 32,34
    5 5neo:A
    (1.69Å)
    		 18 N/A URS0000BC4678 N/A Gloeobacter
    violaceus
    33072    		 28529131 Assembly1
    NH4:A:104 7,9
    6 5vxq:A
    (1.002Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 28973475 Assembly1
    NH4:A:102 2~3
    NH4:A:110 7~8
    7 5vxq:B
    (1.002Å)
    		 11 N/A N/A N/A synthetic
    construct
    32630    		 28973475 Assembly1
    NH4:A:101 16~17
    NH4:A:109 15~16
    NH4:A:110 16~17
    NH4:A:112 17~18
    NH4:B:102 12~13
    8 7uim:B
    (3.1Å)
    		 541 GO:0000373 (P) Group II intron splicing URS0002617790 RF00029 Agathobacter
    rectalis
    39491    		 36356138 Assembly1
    NH4:B:714 328,581
    9 7uin:B
    (2.8Å)
    		 541 GO:0000373 (P) Group II intron splicing URS0002617790 RF00029 Agathobacter
    rectalis
    39491    		 36356138 Assembly1
    NH4:B:729 562,581
    10 8t2r:B
    (3.1Å)
    		 545 GO:0000373 (P) Group II intron splicing URS0002915678 RF00029 Agathobacter
    rectalis
    39491    		 37993708 Assembly1
    NH4:B:714 328,581
    11 8t2t:B
    (3.0Å)
    		 537 GO:0000373 (P) Group II intron splicing URS0002617790 RF00029 Agathobacter
    rectalis
    39491    		 37993708 Assembly1
    NH4:B:710 562,581
    12 8utg:A
    (1.97Å)
    		 21 N/A N/A N/A West
    Nile
    virus
    strain
    NY-99
    1968826    		 38926367 Assembly1
    NH4:A:101 14,18~19
    NH4:A:103 4,13,17
    13 8utg:B
    (1.97Å)
    		 21 N/A N/A N/A West
    Nile
    virus
    strain
    NY-99
    1968826    		 38926367 Assembly2
    NH4:B:102 14,18~19
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.