SEQ2FUN

FURNA
Download all results in tab-seperated text for 9 RNAs.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 1hnx:A
    (3.4Å)

    1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus

    274
    11163189 Assembly1
    PCY:A:1632 693,787~789,795~796
    2 4khp:A
    (3.1Å)

    1506 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E2C4 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    23702293 Assembly1
    PCY:A:1608 677,771~772,779~780
    3 4u4y:2
    (3.2Å)

    1750 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2C2D RF01960
    RF01959
    RF00177
    Saccharomyces
    cerevisiae
    S288C

    559292
    25209664 Assembly1
    PCY:2:2178 904,998~999,1007
    4 4u4y:6
    (3.2Å)

    1795 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00005F2C2D RF01960
    RF01959
    RF00177
    Saccharomyces
    cerevisiae
    S288C

    559292
    25209664 Assembly2
    PCY:6:2204 904,998~999,1006~1007
    5 4w2g:AA
    (2.55Å)

    1498 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    25306919 Assembly1
    PCY:AA:3231 693,787~788,795~796
    6 4w2g:AY
    (2.55Å)

    74 GO:0030533 (F) triplet codon-amino aci...
    GO:0006412 (P) translation
    URS00005AA258 RF00005 Escherichia
    coli

    562
    25306919 Assembly1
    PCY:AA:3231 34~35
    7 4w2g:CA
    (2.55Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    25306919 Assembly2
    PCY:CA:3178 693,787~788,795~796
    8 4w2h:AA
    (2.7Å)

    1497 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    25306919 Assembly1
    PCY:AA:3191 693,788~789,795~796
    9 4w2h:CA
    (2.7Å)

    1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFED RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    25306919 Assembly2
    PCY:CA:3176 693~694,787~788,795~796
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.