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FURNA
Download all results in tab-seperated text for 14 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 3ol7:J
    (2.7Å)

    16 N/A URS000080E368 N/A synthetic
    construct

    32630
    21148772 Assembly3
    PEG:J:7003 605~606
    2 3ol7:N
    (2.7Å)

    16 N/A URS000080E368 N/A synthetic
    construct

    32630
    21148772 Assembly4
    PEG:N:7004 605~606
    3 3r2c:S
    (1.902Å)

    10 N/A URS000080DF91 N/A Aquifex
    aeolicus

    63363
    21652641 Assembly2
    PEG:S:13 2,5
    PEG:S:14 4,6
    4 4ngd:B
    (1.958Å)

    12 N/A URS000080E150 N/A synthetic
    construct

    32630
    24486018 Assembly1
    PEG:A:1104 10~11
    5 4ybb:DA
    (2.1Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25C RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    25775265 Assembly1
    PEG:DA:3200 2008~2009
    PEG:DA:3201 978~979,986,1002
    PEG:DA:3227 747,2015
    PEG:DA:3228 2058~2059
    6 5aox:C
    (2.04Å)

    87 GO:0006617 (P) SRP-dependent cotransla...
    GO:0005786 (C) signal recognition part...
    URS00008FED21 RF00017 synthetic
    construct

    32630
    26585389 Assembly1
    PEG:C:1051 27~28
    7 5it8:DA
    (3.12Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25C RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    27382179 Assembly1
    PEG:DA:3198 979,1002
    PEG:DA:3215 1628,1634
    PEG:DA:3224 2058~2059
    8 5j5b:DA
    (2.8Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    27382179 Assembly1
    PEG:DA:3200 978~979,986,1002
    PEG:DA:3217 1628,1631
    PEG:DA:3225 747,2015
    PEG:DA:3226 2058~2059
    9 5j7l:DA
    (3.0Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    27382179 Assembly1
    PEG:DA:3200 979,986,1002
    PEG:DA:3218 1628,1631
    PEG:DA:3227 2058~2059
    10 5j88:DA
    (3.32Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli

    562
    27382179 Assembly1
    PEG:DA:3200 2008~2009
    PEG:DA:3201 979,986,1002
    PEG:DA:3218 1628,1631,1634
    11 5j8a:DA
    (3.1Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli

    562
    27382179 Assembly1
    PEG:DA:3200 979,986,1002
    PEG:DA:3218 1628,1631
    PEG:DA:3227 2058~2059
    12 5j91:DA
    (2.96Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    27382179 Assembly1
    PEG:DA:3200 978~979,986,1002
    PEG:DA:3217 1628,1631
    PEG:DA:3225 747,2015
    PEG:DA:3226 2058~2059
    13 5jc9:DA
    (3.03Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS00004B0F34 RF02540
    RF02541
    Escherichia
    coli
    K-12

    83333
    27382179 Assembly1
    PEG:DA:3203 979,986
    PEG:DA:3220 1628,1631,1633
    PEG:DA:3229 2058~2059
    14 6i7v:DA
    (2.9Å)

    2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E25C RF02540
    RF02541
    Escherichia
    coli

    562
    30359641 Assembly1
    PEG:DA:3050 677,793,2441~2442
    PEG:DA:3062 986,1002
    PEG:DA:3073 125,128
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
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