Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

FURNA
Download all results in tab-seperated text for 11 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 4ybb:DA
    (2.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 25775265 Assembly1
    PGE:DA:3186 998~999,1158
    PGE:DA:3215 1424,1575
    PGE:DA:3226 1693,1831,1975~1976
    2 5it8:DA
    (3.12Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    PGE:DA:3184 998~999,1158
    PGE:DA:3211 1424,1575
    PGE:DA:3222 1693,1831,1975
    3 5j5b:DA
    (2.8Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    PGE:DA:3186 998~999
    PGE:DA:3213 1424,1575
    PGE:DA:3216 1320~1321
    PGE:DA:3224 1693,1831,1975
    4 5j7l:DA
    (3.0Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    PGE:DA:3186 998,1158
    PGE:DA:3214 1424,1575
    PGE:DA:3225 1693,1831,1975
    5 5j88:DA
    (3.32Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly1
    PGE:DA:3186 998,1158
    PGE:DA:3214 1424,1575
    PGE:DA:3225 1693,1831,1975
    6 5j8a:DA
    (3.1Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    562    		 27382179 Assembly1
    PGE:DA:3186 998,1158
    PGE:DA:3214 1424,1575
    PGE:DA:3225 1693,1831,1975
    7 5j91:DA
    (2.96Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    PGE:DA:3186 998~999
    PGE:DA:3213 1424,1575
    PGE:DA:3216 1320~1321
    PGE:DA:3224 1693,1831,1975
    8 5jc9:DA
    (3.03Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 27382179 Assembly1
    PGE:DA:3189 998~999,1158
    PGE:DA:3216 1424,1575
    PGE:DA:3227 1693,1831,1975
    9 6i7v:AA
    (2.9Å)
    		 1533 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E246 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 30359641 Assembly1
    PGE:AA:1613 715,774~775,806
    10 6i7v:DA
    (2.9Å)
    		 2897 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E25C RF02540
    RF02541    		 Escherichia
    coli
    562    		 30359641 Assembly1
    PGE:DA:3035 998,1158
    11 7pwg:1
    (2.75Å)
    		 2450 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358CC RF02543
    RF02540    		 Giardia
    lamblia
    ATCC
    50803
    184922    		 35100413 Assembly1
    PGE:1:3063 39~40,89~91,2186
    << < 1 > >>
    Go to page

    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

    • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218