SEQ2FUN

FURNA
Download all results in tab-seperated text for 10 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 5dge:5
    (3.45Å)
    		 3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000061F377 RF02540
    RF02543    		 Saccharomyces
    cerevisiae
    S288C
    559292    		 N/A Assembly1
    PRO:C:101 2405,2954
    2 6enj:A
    (3.7Å)
    		 2871 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000CBFF60 RF02540
    RF02541    		 Escherichia
    coli
    562    		 29100052 Assembly1
    PRO:9:101 2451~2452
    3 7cpj:A
    (3.3Å)
    		 2900 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000A76322 RF02540
    RF02541    		 Escherichia
    coli
    562    		 34906996 Assembly1
    PRO:9:101 2063,2451
    4 7k54:1
    (3.2Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34330903 Assembly1
    PRO:5:101 2063,2451
    5 7lv0:1
    (3.2Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34330903 Assembly1
    PRO:5:101 2451,2506,2585
    6 7sso:1
    (3.2Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34903725 Assembly1
    PRO:5:101 2451,2506
    7 7st6:1
    (3.0Å)
    		 2903 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000BC4674 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34903725 Assembly1
    PRO:5:101 2451,2506
    8 8qbt:A
    (2.2Å)
    		 2841 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    BW25113
    679895    		 38503735 Assembly1
    PRO:5:101 2451~2452,2506
    9 8qcq:A
    (2.3Å)
    		 2745 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Bacillus
    subtilis
    subsp.
    subtilis
    str.
    168
    224308    		 38503735 Assembly1
    PRO:y:101 2480,2535
    10 8qoa:a
    (2.0Å)
    		 2753 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541 Escherichia
    coli
    BW25113
    679895    		 38503753 Assembly1
    PRO:Y:101 2451~2452,2506
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.