Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

FURNA
Download all results in tab-seperated text for 17 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 1fjg:A
    (3.0Å)
    		 1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000080E226 RF00177
    RF01959
    RF01960    		 Thermus
    thermophilus
    274    		 11014183 Assembly1
    SCM:A:1633 1063~1064,1066,1068~1069,1191~
    1194,1387~1388
    2 4v56:AA
    (3.93Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly1
    SCM:AA:1661 1063~1064,1066,1068~1069,1191~
    1193,1387
    3 4v56:CA
    (3.93Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly2
    SCM:CA:1659 1063~1064,1066,1068~1069,1191~
    1194,1386~1388
    4 4v57:AA
    (3.5Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly1
    SCM:AA:1662 1063~1064,1066,1068~1069,1191~
    1193,1386~1388
    5 4v57:CA
    (3.5Å)
    		 1530 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00000ABFE9 RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    562    		 17696316 Assembly2
    SCM:CA:1661 1063~1064,1066,1068~1069,1191~
    1193,1387~1388
    6 7n2v:16
    (2.54Å)
    		 1534 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS000081169C RF00177
    RF01959
    RF01960    		 Escherichia
    coli
    K-12
    83333    		 34234344 Assembly1
    SCM:16:1601 1064,1066,1068,1191~1193,1387~
    1388
    SCM:16:1602 688~690,696,700
    7 7n2v:23
    (2.54Å)
    		 2904 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00004B0F34 RF02540
    RF02541    		 Escherichia
    coli
    K-12
    83333    		 34234344 Assembly1
    SCM:23:3001 489,1284~1285
    8 7p7q:a
    (2.4Å)
    		 1521 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358DE RF00177
    RF01959
    RF01960    		 Enterococcus
    faecalis
    1351    		 35387982
    30404935    		 Assembly1
    SCM:a:1652 1090~1091,1093,1095,1217~1219,
    1412~1413
    9 7p7r:a
    (2.9Å)
    		 1521 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358DE RF00177
    RF01959
    RF01960    		 Enterococcus
    faecalis
    V583
    226185    		 35387982
    30404935    		 Assembly1
    SCM:a:1675 1090~1091,1093,1095~1096,1217~
    1219,1412~1413
    10 7p7s:a
    (3.0Å)
    		 1521 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358DE RF00177
    RF01959
    RF01960    		 Enterococcus
    faecalis
    1351    		 35387982
    30404935    		 Assembly1
    SCM:a:1675 1090~1091,1093,1095~1096,1217~
    1220,1413~1414
    11 7p7t:a
    (2.9Å)
    		 1521 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358DE RF00177
    RF01959
    RF01960    		 Enterococcus
    faecalis
    1351    		 35387982
    30404935    		 Assembly1
    SCM:a:1615 1090~1091,1093,1095~1096,1217~
    1219,1412~1413
    12 7p7u:a
    (3.1Å)
    		 1521 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00023358DE RF00177
    RF01959
    RF01960    		 Enterococcus
    faecalis
    1351    		 35387982
    30404935    		 Assembly1
    SCM:a:1660 1090~1091,1093,1095~1096,1217~
    1219,1412~1413
    13 7pib:5
    (4.7Å)
    		 1493 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS00019B76CF RF00177
    RF01959
    RF01960    		 Mycoplasmoides
    pneumoniae
    M129
    272634    		 36171285 Assembly1
    SCM:5:1601 1054~1055,1057,1059,1166~1167,
    1361~1362
    14 8ca7:A
    (2.06Å)
    		 502 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF01960
    RF02542    		 Escherichia
    coli
    BW25113
    679895    		 37550453 Assembly1
    SCM:A:1603 1063~1064,1066,1068~1069,1191~
    1194,1386~1388
    15 8cai:A
    (2.08Å)
    		 1114 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 URS0000D56C37 RF00177
    RF01959
    RF02542
    RF01960    		 Escherichia
    coli
    BW25113
    679895    		 37550453 Assembly1
    SCM:A:1607 1063~1064,1066,1068~1069,1191~
    1194,1386~1388
    16 8uvr:1a
    (2.6Å)
    		 1500 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly1
    SCM:1a:1815 1063~1064,1066,1068~1069,1191~
    1193,1386~1388
    17 8uvr:2a
    (2.6Å)
    		 1503 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF00177
    RF01959
    RF02542
    RF01960    		 Thermus
    thermophilus
    HB8
    300852    		 38165935 Assembly2
    SCM:2a:3236 1063~1064,1066,1068~1069,1191~
    1193,1386~1387
    << < 1 > >>
    Go to page

    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.

    • lydsfumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218