SEQ2FUN

FURNA
Download all results in tab-seperated text for 11 RNAs.
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  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 1m90:A
    (2.8Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    12185246 Assembly1
    SPS:5:9080 2486~2487,2619~2620,2637
    2 1vq8:0
    (2.2Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    16285925 Assembly1
    SPS:4:9701 2486,2619~2620,2637
    3 1vq9:0
    (2.4Å)

    2754 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DFCD RF02540
    RF00002
    Haloarcula
    marismortui

    2238
    16285925 Assembly1
    SPS:4:9701 2486~2487,2541,2619~2620,2637
    4 5dge:1
    (3.45Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02543
    Saccharomyces
    cerevisiae
    S288C

    559292
    N/A Assembly1
    SPS:1:4113 2820~2821,2875,2953~2954,2971
    5 5dge:5
    (3.45Å)

    3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02543
    Saccharomyces
    cerevisiae
    S288C

    559292
    N/A Assembly1
    SPS:5:3403 2820~2821,2875,2953~2954,2971
    6 5dgf:1
    (3.3Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02543
    Saccharomyces
    cerevisiae
    S288C

    559292
    N/A Assembly1
    SPS:1:3401 2820~2821,2875,2953~2954,2971
    7 5dgf:5
    (3.3Å)

    3169 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02543
    Saccharomyces
    cerevisiae
    S288C

    559292
    N/A Assembly2
    SPS:5:3407 2820~2821,2875,2953~2954,2971
    8 5dgv:1
    (3.1Å)

    3148 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02543
    Saccharomyces
    cerevisiae
    S288C

    559292
    N/A Assembly2
    SPS:C:3401 2820~2821,2875,2953~2954,2971
    9 5dgv:5
    (3.1Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000061F377 RF02540
    RF02543
    Saccharomyces
    cerevisiae
    S288C

    559292
    N/A Assembly1
    SPS:D:3401 2820~2821,2875,2953~2954,2971
    10 5tgm:1
    (3.5Å)

    3149 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000B21DCE RF02540
    RF02543
    Saccharomyces
    cerevisiae

    4932
    27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    SPS:1:4125 2820~2821,2875,2954,2971
    11 5tgm:5
    (3.5Å)

    3150 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0000B21DEF RF02540
    RF02543
    Saccharomyces
    cerevisiae

    4932
    27827794
    M107_0.6

    M080_0.6

    M299_0.6

    16
    Assembly1
    SPS:5:4176 2820~2821,2875,2953~2954,2971
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.