SEQ2FUN

FURNA
Download all results in tab-seperated text for 32 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.

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    # PDB
    (Resolution)    		 Length EC number
    & GO term     		RNAcentral Rfam Taxon PubMed ATtRACT
    motif     		Ligand &
    binding nucleotides
    1 9syh:a
    (1.89Å)
    		 2857 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 860~862,910~911,913
    SR0:a:3002 748~750,1271,1325
    SR0:a:3003 27,447~448,472~473,1259~1260
    SR0:a:3004 830,945,2448
    SR0:a:3005 805,828~829,2067~2068,2247
    SR0:a:3006 1656~1657,2578~2579
    2 9t0y:a
    (1.87Å)
    		 2853 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 860~862,910~911,913
    SR0:a:3002 748~750,1271,1325
    SR0:a:3003 27~28,447~448,472~473,1259
    SR0:a:3004 830,945,2448
    SR0:a:3005 829,2067~2068,2247
    SR0:a:3006 1656~1657,2578~2579
    3 9t19:a
    (2.41Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 827~829,2067~2068,2245~2247
    SR0:a:3002 1656~1657,2578~2579
    4 9t1a:a
    (2.39Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 805,828~829,2067~2068,2246~224
    7
    SR0:a:3002 1656~1657,2578~2579
    5 9t1b:a
    (2.32Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    6 9t1e:a
    (2.28Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 805,828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    7 9t1f:a
    (2.32Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    8 9t1g:a
    (2.29Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    9 9t1h:a
    (2.33Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    10 9t1i:a
    (2.3Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 805,828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    11 9t1j:a
    (2.23Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 805,828~829,2067~2068,2246~224
    7
    SR0:a:3002 1656~1657,2578~2579
    12 9t2j:a
    (2.02Å)
    		 596 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    13 9t2k:a
    (2.06Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2246~2247
    SR0:a:3002 1656~1657,2578~2579
    14 9t2l:a
    (2.07Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2246~2247
    SR0:a:3002 1656~1657,2578~2579
    15 9t2m:a
    (2.06Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    16 9t2n:a
    (2.06Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    17 9t2o:a
    (2.07Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    18 9t2p:a
    (2.08Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    19 9t2q:a
    (2.08Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2246~2247
    SR0:a:3002 1656~1657,2578~2579
    20 9t2r:a
    (2.22Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    21 9t2s:a
    (2.07Å)
    		 597 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2246~2247
    SR0:a:3002 1656~1657,2578~2579
    22 9t6m:a
    (1.87Å)
    		 2851 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02540
    RF02541
    RF02543
    RF00002    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 860~862,910~911,913
    SR0:a:3002 748~750,1271,1325
    SR0:a:3003 27~28,447~448,472~473,1259
    SR0:a:3004 829,2067~2068,2247
    SR0:a:3005 1656~1657,2578~2579
    23 9t8k:a
    (2.18Å)
    		 590 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    24 9t8l:a
    (2.21Å)
    		 592 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    25 9t8m:a
    (2.2Å)
    		 589 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    26 9t8n:a
    (2.22Å)
    		 592 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    27 9t8o:a
    (2.19Å)
    		 587 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    28 9t8p:a
    (2.22Å)
    		 589 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 828~829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    29 9t8q:a
    (2.23Å)
    		 592 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    30 9t8r:a
    (2.22Å)
    		 585 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    31 9t8s:a
    (2.22Å)
    		 590 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 829,2067~2068,2247
    SR0:a:3002 1656~1657,2578~2579
    32 9t8t:a
    (2.23Å)
    		 587 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome    		 N/A RF02541
    RF02540
    RF02543    		 Escherichia
    coli
    562    		 N/A Assembly1
    SR0:a:3001 1656~1657,2578~2579
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    Reference:
  • Chengxin Zhang, Lydia Freddolino (2024) "FURNA: a database for function annotations of RNA structures," PLOS Biology 22(7): e3002476.