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FURNA
Download all results in tab-seperated text for 23 RNAs.
  • Click the entry in the '#' column to view structure details of that RNA chain.
  • Hover over PDB to view the title of the structure.
  • Hover over Rfam to view names of Rfam families.
  • Hover over PubMed to view title of the PubMed publications.
  • Hover over Ligand to view the name of the ligand and the ligand-binding nucleotides on the RNA.
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    # PDB
    (Resolution)
    Length EC number
    & GO term
    RNAcentral Rfam Taxon PubMed ATtRACT
    motif
    Ligand &
    binding nucleotides
    1 1fjg:A
    (3.0Å)

    1507 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E226 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus

    274
    11014183 Assembly1
    SRY:A:1634 14,526~527,912~915,1490~1491
    2 1nta:A
    (2.9Å)

    22 N/A URS000080DE50 N/A synthetic
    construct

    32630
    12618190 Assembly1
    SRY:A:26 11~12,16~17
    3 1nta:B
    (2.9Å)

    18 N/A URS000080DFEE N/A synthetic
    construct

    32630
    12618190 Assembly1
    SRY:A:26 107~108,110
    4 1ntb:A
    (2.9Å)

    22 N/A URS000080DE50 N/A synthetic
    construct

    32630
    12618190 Assembly1
    SRY:A:25 11~12,15~17
    5 1ntb:B
    (2.9Å)

    18 N/A URS000080DFEE N/A synthetic
    construct

    32630
    12618190 Assembly1
    SRY:A:25 107,110~111
    6 4dr3:A
    (3.348Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    23322043 Assembly1
    SRY:A:1601 14,526~527,912~915,1490~1491
    7 4dr5:A
    (3.45Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    23322043 Assembly1
    SRY:A:1860 14,526~527,912~915,1490~1491
    8 4dr6:A
    (3.3Å)

    1514 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    23322043 Assembly1
    SRY:A:1956 14,526~527,912~915,1490~1491
    9 4dr7:A
    (3.75Å)

    1513 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    23322043 Assembly1
    SRY:A:1928 14,526~527,912~915,1490~1491
    10 4duz:A
    (3.651Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DD5E RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    N/A Assembly1
    SRY:A:1601 526~527,913~914,1490~1491
    11 4dv1:A
    (3.849Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DEF2 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    N/A Assembly1
    SRY:A:1601 526~527,913~914,1490~1491
    12 4dv3:A
    (3.547Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DDFA RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    N/A Assembly1
    SRY:A:1601 14,526~527,912~915,1491
    13 4dv5:A
    (3.683Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E1D0 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    N/A Assembly1
    SRY:A:1601 14,526~527,912~915,1490~1491
    14 4dv7:A
    (3.294Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080E20C RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    N/A Assembly1
    SRY:A:1601 14,526~527,912~915,1490~1491
    15 4ji1:A
    (3.144Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    24152548 Assembly1
    SRY:A:1601 14,526~527,912~915,1490~1491
    16 4ji3:A
    (3.35Å)

    1511 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    24152548 Assembly1
    SRY:A:1601 14,526~527,913~914,1490~1491
    17 4ji8:A
    (3.742Å)

    1514 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    24152548 Assembly1
    SRY:A:1601 526~527,912~914,1491
    18 4nxn:A
    (3.544Å)

    1512 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS000080DE21 RF00177
    RF01959
    RF01960
    Thermus
    thermophilus
    HB8

    300852
    N/A Assembly1
    SRY:A:1601 14,526~527,913~914,1490~1491
    19 6rw4:A
    (2.97Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    32522994
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    SRY:A:1703 656,898~899,1167,1555~1556
    20 6rw5:A
    (3.14Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    32522994
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    SRY:A:1703 656,898~899,1167,1555~1556
    21 8qrk:A
    (6.69Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    SRY:A:1703 898~899,1165~1167,1555~1556
    22 8qrm:A
    (3.05Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    SRY:A:1703 656,898~899,1167,1555~1556
    23 8qrn:A
    (2.98Å)

    955 GO:0003735 (F) structural constituent ...
    GO:0005840 (C) ribosome
    URS0001A24B4C RF00177 Homo
    sapiens

    9606
    38969660
    1321

    886

    1302

    156

    748

    749

    1207

    M027_0.6

    979

    M089_0.6

    82

    495

    175

    399

    492

    s44

    M043_0.6

    M033_0.6

    M329_0.6

    1194

    1197

    1196

    938

    M142_0.6

    509

    1290

    1031

    760

    994

    M164_0.6

    1312

    1273

    779

    778

    s14

    120

    121

    M047_0.6

    M169_0.6

    M274_0.6

    M325_0.6

    1354

    78

    800

    17

    1186

    M331_0.6

    1241

    M143_0.6

    1364

    M016_0.6

    33

    s61
    Assembly1
    SRY:A:1703 656,898~899,1165~1167,1555~155
    6
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    Reference:
  • Chengxin Zhang, P. Lydia Freddolino (2023) FURNA: a database for function annotations of RNA structures, bioRxiv 2023.12.19.572314.
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